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SRA data
Rv0006
- c.717C>T
Drug resistance types
16 Sensitive
0 RR-TB
8 HR-TB
10 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.1.1.1
34
La1.7.1
4
lineage1.1.1.1;lineage2.2.1
2
lineage4.9
1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
1
lineage1.1.2
1
lineage1.1.3.1
1
lineage4.3.4.1
1
lineage3.1.2
1
Showing 1 to 9 of 9 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
46
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR11082540
MDR-TB
lineage1.1.1.1
None
ERR13284976
MDR-TB
lineage1.1.1.1
None
ERR4797497
HR-TB
lineage1.1.2
in
ERR4822443
Sensitive
lineage4.9
de
ERR4828462
MDR-TB
lineage1.1.1.1;lineage2.2.1
None
ERR4828709
Other
lineage1.1.1.1
vn
ERR4830440
MDR-TB
lineage1.1.1.1
vn
ERR4831913
HR-TB
lineage1.1.1.1
vn
ERR7737643
MDR-TB
lineage1.1.1.1
None
Showing 1 to 10 of 46 entries
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