Rv0010c - c.-78A>C
Drug resistance types
34 Sensitive
6 RR-TB
9 HR-TB
30 MDR-TB
20 Pre-XDR-TB
2 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 5 |
| lineage2.2.1 | 55 |
| lineage2.2.1.1 | 3 |
| lineage4.1.2.1 | 4 |
| lineage4.2.2.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage3 | 3 |
| lineage4.2.2 | 1 |
| lineage2.2.2 | 2 |
| lineage4.3.3 | 2 |
| lineage3.1.1 | 1 |
| lineage4.7 | 2 |
| lineage2.1 | 1 |
| lineage4.8 | 9 |
| lineage4.6.2.2 | 2 |
| lineage1.1.2 | 3 |
| lineage4.5 | 2 |
| lineage1.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.6.4 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9 | 1 |
| lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 105 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28394028 | MDR-TB | lineage4 | None | ERR13266517 | XDR-TB | lineage2.2.1 | None | SRR6356957 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207254 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25207113 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206971 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207381 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207135 | Pre-XDR-TB | lineage2.2.1 | None | ERR9285965 | Sensitive | lineage4.1.2.1 | None | ERR2145524 | MDR-TB | lineage4.2.2.2 | None | ERR11050876 | Sensitive | lineage4.1.2.1 | None | SRR1172832 | Sensitive | lineage2.2.1 | None | SRR28498445 | MDR-TB | lineage2.2.1 | None | SRR12634567 | Sensitive | lineage4.6.1.1 | None | SRR16088180 | Sensitive | lineage2.2.1 | None | SRR28858535 | Sensitive | lineage3 | None | SRR15369038 | Sensitive | lineage4.2.2 | None | ERR13276398 | MDR-TB | lineage2.2.1 | None | SRR13232673 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02599052 | Sensitive | lineage2.2.1 | None | ERR7737811 | MDR-TB | lineage2.2.1 | None | ERR4872270 | MDR-TB | lineage2.2.1 | None | ERR4830168 | Sensitive | lineage2.2.1 | None | ERR13191057 | MDR-TB | lineage2.2.2 | None | ERR2184322 | Sensitive | lineage4.3.3 | pe | ERR5979446 | Sensitive | lineage3.1.1 | None | SRR28351354 | XDR-TB | lineage2.2.1 | None | SRR28646107 | MDR-TB | lineage4.7 | None | SRR25515768 | Sensitive | lineage2.2.1 | None | ERR4457792 | HR-TB | lineage4 | None | ERR4816149 | HR-TB | lineage3 | gb | ERR11080934 | MDR-TB | lineage2.2.1 | None | SRR25207124 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206993 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207392 | Pre-XDR-TB | lineage2.2.1 | None | SRR5074093 | Sensitive | lineage2.1 | vn | SRR12420284 | MDR-TB | lineage2.2.1 | None | SRR29342477 | Sensitive | lineage4.1.2.1 | None | ERR4178215 | HR-TB | lineage4 | None | SRR28646111 | RR-TB | lineage4.8 | None | SRR23310890 | MDR-TB | lineage2.2.1 | None | ERR13235265 | MDR-TB | lineage2.2.2 | None | SRR29385505 | HR-TB | lineage2.2.1 | None | SRR11662524 | MDR-TB | lineage2.2.1 | None | SRR29274248 | RR-TB | lineage4 | None | SRR11444154 | Sensitive | lineage4.6.2.2 | None | ERR4796955 | MDR-TB | lineage2.2.1 | in | SRR23862099 | Sensitive | lineage4.8 | None | SRR16088092 | Sensitive | lineage2.2.1 | None | SRR11972195 | MDR-TB | lineage2.2.1.1 | None | SRR22251614 | RR-TB | lineage2.2.1 | None | ERR4800360 | Pre-XDR-TB | lineage2.2.1 | in | SRR28393262 | MDR-TB | lineage4.8 | None | SRR6152888 | Other | lineage3 | ca | SRR21747046 | Pre-XDR-TB | lineage2.2.1 | None | ERR11775945 | RR-TB | lineage4.6.1.1 | None | ERR4829083 | Sensitive | lineage4.7 | it | SRR28498388 | MDR-TB | lineage2.2.1 | None | SRR5710024 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709895 | Pre-XDR-TB | lineage2.2.1 | th | SRR28044692 | Sensitive | lineage1.1.2 | None | SRR29906793 | Sensitive | lineage4.5 | None | SRR25206982 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045779 | Sensitive | lineage1.1.2 | None | ERR2677438 | MDR-TB | lineage2.2.1 | de | SRR20969384 | MDR-TB | lineage2.2.1.1 | None | SRR21576721 | MDR-TB | lineage2.2.1 | None | SRR069961 | Sensitive | lineage2.2.1 | None | ERR11043757 | MDR-TB | lineage2.2.1 | None | SRR22249746 | HR-TB | lineage1.1.1 | None | SRR25515296 | Sensitive | lineage2.2.1 | None | SRR6797565 | Other | lineage1.2.2.2 | None | SRR1175107 | Sensitive | lineage2.2.1 | None | SRR20969737 | Other | lineage2.2.1 | None | SRR23861744 | Sensitive | lineage4.8 | None | SRR10808705 | Sensitive | lineage4.3.3 | None | SRR070018 | Sensitive | lineage2.2.1 | None | ERR11798571 | MDR-TB | lineage2.2.1 | None | SRR5486887 | MDR-TB | lineage4.1.2.1 | None | ERR11049587 | HR-TB | lineage4.5 | None | SRR21747032 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243606 | Sensitive | lineage4.8 | None | ERR11776029 | MDR-TB | lineage4.8 | None | DRR473732 | Other | lineage2.2.1 | None | SRR29126379 | Sensitive | lineage4.8 | None | ERR2653029 | Sensitive | lineage4.3.2 | None | ERR11049084 | Sensitive | lineage4.6.2.2 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | ERR13276278 | MDR-TB | lineage2.2.1 | None | ERR1203067 | HR-TB | lineage4.6.4 | None | SRR30180449 | Pre-XDR-TB | lineage2.2.1 | None | SRR12882614 | Sensitive | lineage1.1.2 | None | ERR4797343 | MDR-TB | lineage2.2.1 | in | ERR3148197 | Pre-XDR-TB | lineage4.1.1.3 | mx | ERR4796771 | Pre-XDR-TB | lineage2.2.1 | in | ERR13291000 | RR-TB | lineage4.9 | None | ERR11243602 | Sensitive | lineage4.8 | None | ERR11774999 | HR-TB | lineage2.2.1 | None | SRR28045101 | MDR-TB | lineage2.2.1.2 | None | ERR7911140 | RR-TB | lineage2.2.1 | vn | ERR8665906 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243615 | Sensitive | lineage4.8 | None | ERR067715 | MDR-TB | lineage2.2.1 | ru | SRR16149167 | MDR-TB | lineage4 | None | ERR2307591 | HR-TB | lineage2.2.1 | None |
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