Rv0010c - c.99T>C
Drug resistance types
11036 Sensitive
241 RR-TB
1617 HR-TB
1329 MDR-TB
213 Pre-XDR-TB
59 XDR-TB
11879 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 2143 |
| La1.8.1 | 6888 |
| lineage1.1.2 | 3691 |
| lineage1.1.1 | 860 |
| lineage1.2.1.2.1 | 2728 |
| lineage1.1.3 | 189 |
| lineage1.1.1.1 | 1303 |
| M.canetti | 66 |
| lineage6.2.2 | 87 |
| lineage1.1.3.1 | 886 |
| lineage6.1.3 | 397 |
| lineage1.2.2.1 | 394 |
| lineage6.3.1 | 282 |
| La1.7.X-unk4 | 79 |
| lineage1.2.1.2 | 442 |
| La1.2.BCG | 519 |
| La1.3 | 130 |
| La1.7.1 | 923 |
| lineage1.1.3.2 | 467 |
| La1.2 | 648 |
| lineage1.2.2 | 23 |
| La3 | 225 |
| lineage5.1.4 | 77 |
| lineage1.2.1 | 51 |
| lineage1.2.1.1 | 188 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| lineage6.2.3 | 108 |
| lineage1.1.3.3 | 185 |
| lineage5.1 | 69 |
| La1.7 | 31 |
| La1.6;lineage4.1 | 1 |
| La1.4 | 115 |
| La1.8.2 | 227 |
| lineage1.1.2;lineage3.1.1 | 7 |
| La2 | 252 |
| lineage5.1.1 | 201 |
| lineage1.1.2;lineage3 | 12 |
| lineage1.1.2;lineage1.2.2.2 | 12 |
| La1.6 | 129 |
| La3;M.canetti | 11 |
| La1.5 | 7 |
| La1.8.1;lineage4 | 1 |
| lineage6.1.2 | 119 |
| lineage5.1.2 | 64 |
| lineage1.2.1.2.1;lineage2.2.1 | 6 |
| lineage5.1.3 | 39 |
| lineage6 | 37 |
| lineage5.3 | 46 |
| lineage1.1.2;lineage1.1.3.1 | 3 |
| lineage6.1.3;lineage6.3.3 | 1 |
| La1.1 | 9 |
| lineage6.1.1 | 235 |
| lineage6.3.2 | 26 |
| lineage1.2.2.2;lineage4 | 8 |
| lineage5 | 29 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage1.1.3.1;lineage4 | 4 |
| lineage1.1.1.1;lineage4.8 | 1 |
| lineage1.1.3.2;lineage3.1.1 | 3 |
| La1.7.X-unk5 | 13 |
| lineage4.3.4.1;lineage4.6.2.2;lineage6.1.2 | 1 |
| lineage2.2.1 | 3 |
| lineage1.1.2;lineage4.1.1.3 | 2 |
| lineage1.1.3.3;lineage2.2.1 | 1 |
| lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | 2 |
| lineage5.2 | 60 |
| lineage6.3.3 | 50 |
| lineage5.1.5 | 22 |
| lineage9 | 27 |
| lineage1.1.2;lineage2.2.1;lineage4.9 | 1 |
| lineage1.1.3.1;lineage4.1.3 | 1 |
| lineage4.1.2.1;lineage4.6.2.2;lineage6.3.1 | 1 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| lineage1.1.1.1;lineage2.2.1 | 21 |
| lineage1.1.2;lineage2.2.1 | 14 |
| lineage4;lineage6.1.3 | 1 |
| lineage1.1.3.1;lineage1.2.2.2 | 3 |
| lineage1.2.1.2;lineage2.2.1 | 1 |
| lineage1.2.2.2;lineage4.1.2.1 | 1 |
| lineage1.1 | 25 |
| lineage4.1.1.3;lineage5.1.2 | 2 |
| lineage4.1.2.1;lineage6.3.1 | 4 |
| lineage1.1.3.2;lineage1.2.2.2 | 4 |
| lineage4.1.2.1;lineage5.3 | 1 |
| lineage1.2.2.2;lineage4.3.2.1 | 3 |
| La3;lineage2.2.1 | 1 |
| lineage6.1.3;lineage6.2.2 | 1 |
| La1.2;lineage4.9 | 1 |
| lineage1;lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | 1 |
| La1.3;lineage1.2.2.2 | 15 |
| lineage4.1;lineage6.3.1 | 2 |
| lineage6.2.1 | 32 |
| La1.8.X-unk6 | 9 |
| lineage1.1.2;lineage1.1.3.3 | 4 |
| lineage6.1.1;lineage6.2 | 1 |
| lineage6.1.1;lineage6.1.3 | 1 |
| lineage1.2.2.1;lineage2.2.1.1 | 1 |
| lineage1.1.3.2;lineage4.3.4.2.1 | 3 |
| lineage5.1.1;lineage6.3.1 | 2 |
| lineage1.1.2;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage4.1.3;lineage5.1.1 | 2 |
| lineage1.2.2.2;lineage2.2.1 | 14 |
| La1.7.1;La1.8.1 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage4.1.3;lineage6.2.1 | 1 |
| lineage6.2 | 2 |
| lineage3.1.1;lineage4 | 1 |
| La1.8.1;La3 | 1 |
| lineage1.1.2;lineage4 | 13 |
| lineage6.1 | 2 |
| lineage1 | 2 |
| lineage1.1.2;lineage3.1.1;lineage4.3.4.2.1 | 1 |
| lineage4.1.3;lineage6.3.1 | 4 |
| lineage1.1.2;lineage4.9 | 3 |
| lineage1.2.2.2;lineage3 | 10 |
| lineage1.2.2.1;lineage4 | 4 |
| lineage1.1.2;lineage4.3.4.2.1 | 2 |
| lineage4.6.2.2;lineage6.3.1 | 1 |
| lineage8 | 5 |
| lineage1.1.3.1;lineage4.7 | 1 |
| lineage1.1.1.1;lineage4.1 | 2 |
| lineage1.2.1.2.1;lineage4.1.2.1 | 1 |
| La1;lineage1.1.2 | 2 |
| lineage1.1.2;lineage3.1.2 | 4 |
| lineage4.3.4.2;lineage6.1.3 | 1 |
| lineage1.2.2.2;lineage4.8 | 2 |
| lineage2.2.1;lineage6.1.3 | 2 |
| lineage1.2.2.2;lineage4.1.1.3 | 2 |
| lineage4.6.2.2 | 1 |
| lineage1.1.2;lineage4.1.3 | 1 |
| lineage1.1.2;lineage4.1.2.1 | 4 |
| lineage1.1.2;lineage2 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3.1.2.1;lineage4 | 1 |
| lineage1.2.2.2;lineage4.1.1.1 | 2 |
| La2;lineage4.9 | 1 |
| lineage1.1.2;lineage3.1.2.1 | 1 |
| La1.6;lineage4 | 2 |
| lineage1.2.1.2.1;lineage4 | 2 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.6.1 | 1 |
| lineage1.2.1.2.1;lineage4.1.2 | 1 |
| lineage1.1.2;lineage4.3.4.2.1;lineage4.4 | 1 |
| La1.2.BCG;lineage4.9 | 3 |
| lineage1.1.3.2;lineage4 | 3 |
| lineage6.1.1;lineage6.3.1 | 1 |
| lineage1.2.1.2.1;lineage4.3.4.1 | 1 |
| lineage1.2.2.2;lineage4.3.4.2.1 | 2 |
| lineage4;lineage6.2.1 | 1 |
| lineage4;lineage6.3.1 | 4 |
| La1.3;lineage1.2.1.2.1 | 1 |
| lineage1.1.1;lineage1.1.3.3 | 1 |
| lineage1.1.2;lineage4.1.2;lineage4.3.4.2.1 | 1 |
| La1 | 8 |
| lineage1.1.3.2;lineage3.1.1;lineage4 | 1 |
| lineage1.1.1;lineage2.2.1 | 5 |
| lineage1.1.1.1;lineage2.2 | 1 |
| La1.1;lineage1.2.1.2.1 | 1 |
| lineage1.1;lineage2.2.1 | 1 |
| 79 | |
| La1.8;lineage1.2.2.2 | 1 |
| lineage1.1.2;lineage4.7 | 1 |
| lineage1.1.2;lineage1.1.3 | 1 |
| La1.2;La1.7.1 | 1 |
| lineage1.1.3.2;lineage2.2.1 | 1 |
| lineage1.1.1.1;lineage2.2.1.1 | 4 |
| lineage1.1.3.1;lineage2.2.1 | 2 |
| lineage1.2.2.2;lineage4.3.3 | 3 |
| lineage1.1.2;lineage1.1.3.1;lineage2.2.1 | 1 |
| La1.1;lineage1.2.2.2 | 1 |
| lineage1.1.3.1;lineage1.2.1.2.1 | 1 |
| La1.2;La2 | 1 |
| lineage1.2.2.2;lineage2.2 | 1 |
| lineage1.1.2;lineage2.2.1.2 | 1 |
| lineage1.1.1.1;lineage6.1.3 | 1 |
| lineage1.2.1.1;lineage4 | 2 |
| lineage1.1.3;lineage1.2.2.2 | 1 |
| lineage1.1.3;lineage4.2.2.2 | 1 |
| lineage5.1.1;lineage5.1.2 | 1 |
| lineage1.1.2;lineage1.1.3.2 | 1 |
| lineage2.2.1;lineage5 | 1 |
| lineage1.1.2;lineage3.1.1;lineage4.6.1.1 | 1 |
| lineage1.1.1.1;lineage4.2.2 | 1 |
| lineage1.1.2;lineage4.2.2 | 1 |
| lineage4.1.2.1;lineage6.1.3 | 1 |
| lineage1.1.3.2;lineage4.1.2 | 1 |
| lineage1.1;lineage2.2;lineage3.1.1;lineage4.2.2.2;lineage4.3.3 | 1 |
| lineage1.1.1;lineage4.1.1.3;lineage4.6.2.2 | 1 |
| lineage1.2.2.1;lineage4.3.4.2.1 | 3 |
| lineage4.3.4.1;lineage6.1.1 | 1 |
| lineage1.1.1.1;lineage4.1.2.1 | 1 |
| lineage1.1;lineage3.1.1;lineage4;lineage5.1 | 1 |
| lineage1.1.1.1;lineage1.2.1.2.1 | 1 |
| lineage1.2.2.1;lineage4.1.2 | 1 |
| lineage1.1.2;lineage4.2.2.2 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3 | 1 |
| La1.2;lineage3 | 1 |
| lineage1.1.3;lineage2.2.1 | 1 |
| La1.2.BCG;La1.8.1;lineage4 | 1 |
| La3;lineage1.1.2 | 1 |
| lineage1.2.2;lineage3.1.2 | 1 |
| lineage1.1.2;lineage4.8 | 3 |
| lineage1.1.1;lineage4.8 | 1 |
| lineage5.1.5;lineage6.1.1 | 1 |
| lineage4.8;lineage5.1.1 | 2 |
| La1.8.1;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage1.2.2.2;lineage3.1.2.1 | 1 |
| lineage1.1.3.2;lineage4.1.1.3 | 2 |
| lineage1.1.1;lineage1.2.1.2.1 | 1 |
| lineage1.1.1.1;lineage4.2.1 | 1 |
| lineage1.1;lineage4 | 1 |
| lineage1.1.1.1;lineage4.4.2 | 1 |
| lineage1.1.2;lineage4.1 | 1 |
| lineage1.2.2.2;lineage4.1.2 | 2 |
| lineage4.6.2.2;lineage6.1.2 | 1 |
| lineage1.2.2.1;lineage4.3.4.2 | 1 |
| lineage4.1.3 | 1 |
| lineage1.1.3.1;lineage2.2.1.2 | 1 |
| lineage1.2.2.1;lineage4.1.1.1 | 1 |
| lineage1.1.1;lineage4.2.2 | 1 |
| La1.2.BCG;La1.8.2 | 1 |
| La3;lineage4.1.2 | 1 |
| La2;M.canetti | 1 |
| lineage1.2.2.2;lineage3;lineage4.4.1.1 | 1 |
| lineage1.1.3.1;lineage4.3.3 | 1 |
| lineage4.1.2.1;lineage6.1.1 | 2 |
| lineage1.2.2.2;lineage3.1.2 | 1 |
| La1.2.BCG;lineage1.1.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2 | 1 |
| lineage1.1.2;lineage4.3.2.1 | 2 |
| La1.2.BCG;lineage4 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage1.1.3.2;lineage4.3.4.2.1;lineage4.9 | 1 |
| lineage1.1.2;lineage4.4 | 1 |
| lineage1.1.2;lineage3;lineage4 | 1 |
| lineage6.1.3;lineage6.2 | 2 |
| lineage2.2.1.1;lineage6.1.2 | 1 |
| lineage4.1.2.1;lineage6.3.2 | 1 |
| lineage1.1.3;lineage4 | 1 |
| lineage1.1.1;lineage2.2.1.2 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage4 | 2 |
| lineage1.1.1;lineage1.1.2;lineage4.6.1 | 1 |
| lineage5.1.1;lineage5.1.2;lineage6.3.1 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3.1.2.1 | 1 |
| lineage1.1.1.1;lineage1.1.2 | 1 |
| lineage1.2.1.1;lineage4.1.1.1 | 1 |
| lineage1.2.2.2;lineage4.8.1 | 1 |
| lineage1.1.2;lineage4.1.2 | 1 |
| La1.2;La1.8.2 | 1 |
| lineage1.2.2.2;lineage4.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1 | 1 |
| lineage2.2.1.1;lineage6.1.3 | 1 |
| lineage1.1.3.3;lineage4 | 1 |
| lineage1.1.3.2;lineage4.1.2.1 | 1 |
| lineage1.1;lineage4.1.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage1.1.2;lineage3.1.1;lineage4 | 1 |
| lineage1.1.3.1;lineage3;lineage4.4.2 | 1 |
| La1.1;lineage3 | 1 |
| lineage1.2.2.1;lineage4.8.1 | 1 |
| lineage2.2 | 1 |
| lineage4.6.2.2;lineage6 | 1 |
| lineage5.1.2;lineage6.3.1 | 1 |
| lineage4.8;lineage6.3.1 | 1 |
| lineage3.1.2;lineage4.9 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4 | 1 |
| lineage1.2.1.2.1;lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 26374 |
Geographic prevalence
Country level data for this variant is available for 5148 isolates.
Statisctical support
Not enough data to calculate support.
Samples
This table has 26374 rows and could cause your browser to crash if rendered.
