Rv0407 - c.-27T>G


Drug resistance types
44 Sensitive 6 RR-TB 7 HR-TB 77 MDR-TB 7 Pre-XDR-TB 1 XDR-TB 82 Other
lineage Counts
lineage Count
lineage2.2.1 29
lineage4.6.2.2 1
lineage4.2.1 7
lineage4.8 10
lineage4.3.3 6
lineage4.2.1.1 3
lineage4.2.1;lineage2.2.1 1
lineage4.3.4.1 3
lineage4.1.2.1 6
lineage4.6.5 108
lineage3 4
lineage4.4.1.1 2
lineage4.5 1
lineage4.4.1.2 1
lineage4.1.2 1
lineage4.3.2 2
lineage2.2 1
lineage4.3.2.1 1
lineage1 1
lineage9 1
lineage4.1.1.3 2
lineage4 2
lineage1.1.1.1 1
La1.8.1 1
La1.8.2 13
La1.2 10
lineage4.7 2
lineage4.6.5;lineage4.6.1.2 1
lineage4.2.2.2 1
lineage4.8;lineage4.7 1
lineage4.1.1 1
spoligotype Counts
spoligotype Count
None 224
Geographic prevalence
Country level data for this variant is available for 29 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11050449 Sensitive lineage2.2.1 None
ERR11050485 Sensitive lineage4.6.2.2 None
SRR13232650 MDR-TB lineage2.2.1 None
SRR14781949 Sensitive lineage2.2.1 None
SRR13232618 Pre-XDR-TB lineage2.2.1 None
SRR14781855 MDR-TB lineage4.2.1 None
SRR14781854 HR-TB lineage4.8 None
SRR14782241 Sensitive lineage2.2.1 None
SRR14782293 Other lineage4.8 None
SRR14782248 Sensitive lineage4.3.3 None
SRR14782428 Sensitive lineage4.3.3 None
SRR14782415 Other lineage4.2.1.1 None
SRR14782507 XDR-TB lineage4.2.1;lineage2.2.1 None
SRR14782484 Other lineage4.2.1.1 None
SRR14782438 Sensitive lineage4.8 None
SRR14782486 MDR-TB lineage2.2.1 None
SRR14782506 Sensitive lineage4.8 None
SRR14782528 MDR-TB lineage2.2.1 None
SRR14782701 Pre-XDR-TB lineage4.2.1 None
SRR14782668 Sensitive lineage2.2.1 None
SRR14782562 MDR-TB lineage2.2.1 None
SRR14782578 Sensitive lineage2.2.1 None
SRR14782592 HR-TB lineage4.2.1.1 None
SRR14782684 Other lineage2.2.1 None
SRR14782773 Sensitive lineage4.3.4.1 None
SRR14782811 Sensitive lineage4.1.2.1 None
SRR14782788 Other lineage2.2.1 None
SRR14801452 MDR-TB lineage4.2.1 None
SRR14801648 Sensitive lineage4.3.3 None
SRR14801744 Sensitive lineage2.2.1 None
SRR14801720 RR-TB lineage4.8 None
SRR16088109 MDR-TB lineage2.2.1 None
SRR14801926 Sensitive lineage2.2.1 None
SRR14801996 MDR-TB lineage2.2.1 None
SRR15315911 Other lineage2.2.1 None
SRR16058163 Other lineage4.6.5 None
SRR14802174 Pre-XDR-TB lineage4.2.1 None
ERR11050618 Other lineage4.6.5 None
ERR11050620 Other lineage4.6.5 None
SRR18715407 MDR-TB lineage2.2.1 None
SRR18213916 Other lineage4.6.5 None
SRR18714932 Pre-XDR-TB lineage2.2.1 None
SRR18715052 MDR-TB lineage2.2.1 None
SRR18715273 Sensitive lineage2.2.1 None
SRR18714888 Pre-XDR-TB lineage4.3.3 None
SRR19303775 Other lineage3 None
SRR18715415 Pre-XDR-TB lineage2.2.1 None
ERR11050795 Sensitive lineage4.8 None
SRR19303853 Sensitive lineage4.1.2.1 None
SRR19303788 Sensitive lineage4.8 None
ERR11050867 MDR-TB lineage4.6.5 None
SRR20139551 Pre-XDR-TB lineage4.1.2.1 None
SRR20139570 HR-TB lineage4.1.2.1 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR20139562 RR-TB lineage4.8 None
SRR21658388 Other lineage4.6.5 None
SRR21728327 Other lineage4.6.5 None
SRR21661626 Other lineage4.6.5 None
SRR21722055 Other lineage4.6.5 None
ERR11081049 MDR-TB lineage4.6.5 None
ERR11068067 MDR-TB lineage4.6.5 None
ERR11081688 MDR-TB lineage4.6.5 None
ERR11081207 MDR-TB lineage4.6.5 None
ERR11081348 MDR-TB lineage4.6.5 None
ERR11081093 MDR-TB lineage4.6.5 None
ERR11081160 MDR-TB lineage4.6.5 None
ERR11081318 MDR-TB lineage4.6.5 None
ERR11082796 Other lineage4.6.5 None
ERR11082694 MDR-TB lineage4.6.5 None
SRR6650394 Sensitive lineage3 None
SRR23938695 MDR-TB lineage2.2.1 None
SRR6650379 Sensitive lineage4.5 None
SRR6650392 Sensitive lineage2.2.1 None
SRR6650117 Sensitive lineage4.4.1.2 None
SRR6650302 Sensitive lineage3 None
SRR26800485 Other lineage4.6.5 None
SRR6650230 MDR-TB lineage2.2.1 None
SRR21732062 Other lineage4.6.5 None
SRR21732607 Other lineage4.6.5 None
SRR26800463 Other lineage4.6.5 None
SRR3085337 MDR-TB lineage4.6.5 None
SRR3082076 MDR-TB lineage4.6.5 None
SRR3082086 MDR-TB lineage4.6.5 None
ERR4815152 Other lineage4.6.5 None
SRR3082085 MDR-TB lineage4.6.5 None
SRR5818640 MDR-TB lineage4.6.5 dj
ERR4817024 HR-TB lineage4.6.5 None
ERR3275959 Other lineage4.6.5 nl
SRR5818629 Other lineage4.6.5 dj
SRR5818645 Other lineage4.6.5 dj
SRR3085338 MDR-TB lineage4.6.5 None
ERR3275928 Other lineage4.6.5 nl
ERR2432996 Sensitive lineage4.1.2 None
SRR5818665 Other lineage4.6.5 dj
SRR5818633 MDR-TB lineage4.6.5 dj
SRR5818696 MDR-TB lineage4.6.5 dj
SRR23310904 MDR-TB lineage4.2.1 None
ERR2512735 Sensitive lineage4.3.2 None
ERR3275855 Other lineage4.6.5 nl
SRR5818574 MDR-TB lineage4.6.5 dj
ERR4818444 Other lineage4.6.5 None
ERR3275721 Other lineage4.6.5 nl
ERR1023376 Other lineage4.6.5 None
SRR2100924 Other lineage4.6.5 None
SRR20139565 RR-TB lineage4.1.2.1 None
SRR20139569 RR-TB lineage4.1.2.1 None
SRR23310997 MDR-TB lineage4.2.1 None
ERR2517259 MDR-TB lineage4.6.5 nl
SRR23311023 MDR-TB lineage4.2.1 None
ERR2677450 MDR-TB lineage4.6.5 de
ERR2516969 MDR-TB lineage4.6.5 gb
ERR4831324 MDR-TB lineage4.6.5 de
SRR23311028 Sensitive lineage2.2 None
ERR278537 Other lineage4.6.5 None
ERR4822294 MDR-TB lineage4.6.5 None
ERR2516289 MDR-TB lineage4.6.5 be
ERR4829436 Other lineage4.6.5 it
ERR2517453 Other lineage4.6.5 nl
ERR2517507 Other lineage4.6.5 nl
ERR4828839 MDR-TB lineage4.6.5 None
ERR4828980 MDR-TB lineage4.6.5 None
ERR4828994 MDR-TB lineage4.6.5 it
ERR4829377 MDR-TB lineage4.6.5 it
ERR4828796 HR-TB lineage4.6.5 None
ERR4828873 MDR-TB lineage4.6.5 None
SRR6257040 MDR-TB lineage2.2.1 None
ERR4829886 Other lineage4.6.5 it
SRR6982043 Sensitive lineage4.4.1.1 None
ERR4830795 MDR-TB lineage4.6.5 et
ERR4831233 MDR-TB lineage4.6.5 None
ERR11067359 Other lineage4.6.5 None
SRR6896308 Sensitive lineage4.3.2.1 None
ERR4828826 MDR-TB lineage4.6.5 it
ERR4829100 MDR-TB lineage4.6.5 dj
ERR4829104 MDR-TB lineage4.6.5 dj
ERR10465861 Other lineage4.6.5 None
ERR11049048 Other lineage4.6.5 None
ERR11049049 Other lineage4.6.5 None
ERR025887 Sensitive lineage1 None
ERR11049064 Other lineage9 None
ERR11465185 Sensitive lineage4.6.5 None
ERR11465184 Other lineage4.6.5 None
SRR7829594 MDR-TB lineage4.6.5 None
ERR10748321 MDR-TB lineage4.1.1.3 None
ERR11043110 MDR-TB lineage4.6.5 None
ERR10796644 HR-TB lineage4 None
ERR11043111 MDR-TB lineage4.6.5 None
ERR11043121 MDR-TB lineage4.6.5 None
ERR11043178 Sensitive lineage1.1.1.1 None
ERR11043538 MDR-TB lineage4.6.5 None
ERR11043420 Other lineage4.6.5 None
ERR11043537 MDR-TB lineage4.6.5 None
ERR11043614 MDR-TB lineage4.6.5 None
ERR11044170 MDR-TB lineage4.6.5 None
ERR11043665 MDR-TB lineage4.6.5 None
ERR11043980 Other lineage4.6.5 None
ERR11044069 MDR-TB lineage4.6.5 None
ERR11044102 MDR-TB lineage4.6.5 None
ERR11044129 MDR-TB lineage4.6.5 None
ERR11044365 MDR-TB lineage4.6.5 None
ERR4821935 Other lineage4.6.5 gb
ERR11044475 MDR-TB lineage4.6.5 None
ERR4820865 MDR-TB lineage4.6.5 gb
ERR11044454 Other lineage4.6.5 None
ERR11044588 MDR-TB lineage4.6.5 None
ERR2513617 Other lineage4.6.5 gb
ERR3470650 Other lineage4.6.5 None
ERR11049467 MDR-TB lineage4.6.5 None
ERR4627382 Other La1.8.1 None
ERR11049438 MDR-TB lineage4.6.5 None
ERR386896 Other lineage4.6.5 None
ERR4828798 HR-TB lineage4.6.5 None
ERR6139677 Other La1.8.2 None
ERR4828797 Other lineage4.6.5 None
ERR5530526 MDR-TB lineage4.3.3 None
ERR6140656 Other La1.8.2 None
ERR6140351 Other La1.8.2 None
ERR6140659 Other La1.8.2 None
ERR6139641 Other La1.8.2 None
ERR6140135 Other La1.8.2 None
ERR6140466 Other La1.8.2 None
ERR6140773 Other La1.8.2 None
ERR6140651 Other La1.8.2 None
ERR6140775 Other La1.8.2 None
ERR6140661 Other La1.8.2 None
ERR6140667 Other La1.8.2 None
ERR6140819 Other La1.8.2 None
ERR6198291 Other La1.2 None
ERR6197027 Other lineage4.7 None
ERR6198207 Other La1.2 None
ERR6198204 Other La1.2 None
ERR6198210 Other La1.2 None
ERR6198377 Other La1.2 None
ERR6198378 Other La1.2 None
ERR6198398 Other La1.2 None
ERR6198395 Other La1.2 None
ERR6397159 Other lineage4.6.5 None
ERR6201800 Other La1.2 None
ERR6198444 Other La1.2 None
ERR6358721 MDR-TB lineage4.6.5;lineage4.6.1.2 None
ERR7764393 Sensitive lineage4.3.4.1 None
SRR21732416 Other lineage4.6.5 None
ERR7764348 Other lineage4.3.2 None
ERR7764375 Sensitive lineage4.8 None
ERR7801175 RR-TB lineage4.6.5 None
ERR7764424 Other lineage4.1.1.3 None
ERR9117701 MDR-TB lineage4.6.5 None
ERR7801176 RR-TB lineage4.6.5 None
ERR8650529 MDR-TB lineage4.3.3 None
ERR9285995 Other lineage4.6.5 None
ERR11050065 Other lineage4.6.5 None
ERR9125562 Other lineage4.6.5 None
ERR11050212 Sensitive lineage4.2.2.2 None
SRR1002684 MDR-TB lineage2.2.1 None
ERR11050114 Sensitive lineage4.7 None
ERR11050120 Sensitive lineage4.8;lineage4.7 None
ERR11050181 Sensitive lineage3 None
ERR11050204 Sensitive lineage4 None
ERR11050229 Sensitive lineage4.1.1 None
ERR11050214 Sensitive lineage4.8 None
ERR11050224 MDR-TB lineage2.2.1 None
SRR10809102 MDR-TB lineage4.6.5 None
SRR10851741 Sensitive lineage4.3.4.1 None
ERR11050383 Sensitive lineage2.2.1 None