Rv0407 - c.-27T>G
Drug resistance types
44 Sensitive
6 RR-TB
7 HR-TB
77 MDR-TB
7 Pre-XDR-TB
1 XDR-TB
84 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.5 | 110 |
| lineage1 | 1 |
| lineage9 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4 | 2 |
| lineage1.1.1.1 | 1 |
| La1.8.2 | 13 |
| La1.8.1 | 1 |
| lineage4.3.3 | 6 |
| La1.2 | 10 |
| lineage4.7 | 2 |
| lineage4.6.5;lineage4.6.1.2 | 1 |
| lineage4.3.2 | 2 |
| lineage4.3.4.1 | 3 |
| lineage4.8 | 10 |
| lineage2.2.1 | 29 |
| lineage4.8;lineage4.7 | 1 |
| lineage3 | 4 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.2.1 | 7 |
| lineage4.2.1.1 | 3 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4.1.2.1 | 6 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 226 |
Geographic prevalence
Country level data for this variant is available for 29 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4828826 | MDR-TB | lineage4.6.5 | it | ERR11465184 | Other | lineage4.6.5 | None | ERR11465185 | Sensitive | lineage4.6.5 | None | ERR11049048 | Other | lineage4.6.5 | None | ERR11049049 | Other | lineage4.6.5 | None | SRR7829594 | MDR-TB | lineage4.6.5 | None | ERR025887 | Sensitive | lineage1 | None | ERR11049064 | Other | lineage9 | None | ERR10748321 | MDR-TB | lineage4.1.1.3 | None | ERR10465861 | Other | lineage4.6.5 | None | ERR10796644 | HR-TB | lineage4 | None | ERR11043121 | MDR-TB | lineage4.6.5 | None | ERR11043538 | MDR-TB | lineage4.6.5 | None | ERR11043110 | MDR-TB | lineage4.6.5 | None | ERR11043420 | Other | lineage4.6.5 | None | ERR11043111 | MDR-TB | lineage4.6.5 | None | ERR11043178 | Sensitive | lineage1.1.1.1 | None | ERR11043537 | MDR-TB | lineage4.6.5 | None | ERR11044102 | MDR-TB | lineage4.6.5 | None | ERR11043665 | MDR-TB | lineage4.6.5 | None | ERR11044069 | MDR-TB | lineage4.6.5 | None | ERR11043614 | MDR-TB | lineage4.6.5 | None | ERR11043980 | Other | lineage4.6.5 | None | ERR11044588 | MDR-TB | lineage4.6.5 | None | ERR11044129 | MDR-TB | lineage4.6.5 | None | ERR11044170 | MDR-TB | lineage4.6.5 | None | ERR11044365 | MDR-TB | lineage4.6.5 | None | ERR11044454 | Other | lineage4.6.5 | None | ERR11044475 | MDR-TB | lineage4.6.5 | None | ERR3470650 | Other | lineage4.6.5 | None | ERR4820865 | MDR-TB | lineage4.6.5 | gb | ERR4821935 | Other | lineage4.6.5 | gb | ERR6139641 | Other | La1.8.2 | None | ERR386896 | Other | lineage4.6.5 | None | ERR11049467 | MDR-TB | lineage4.6.5 | None | ERR4828797 | Other | lineage4.6.5 | None | ERR11049438 | MDR-TB | lineage4.6.5 | None | ERR4627382 | Other | La1.8.1 | None | ERR2513617 | Other | lineage4.6.5 | gb | ERR4828798 | HR-TB | lineage4.6.5 | None | ERR5530526 | MDR-TB | lineage4.3.3 | None | ERR6140351 | Other | La1.8.2 | None | ERR6139677 | Other | La1.8.2 | None | ERR6140659 | Other | La1.8.2 | None | ERR6140135 | Other | La1.8.2 | None | ERR6140661 | Other | La1.8.2 | None | ERR6140656 | Other | La1.8.2 | None | ERR6140466 | Other | La1.8.2 | None | ERR6140667 | Other | La1.8.2 | None | ERR6140651 | Other | La1.8.2 | None | ERR6140775 | Other | La1.8.2 | None | ERR6198377 | Other | La1.2 | None | ERR6140773 | Other | La1.8.2 | None | ERR6197027 | Other | lineage4.7 | None | ERR6198207 | Other | La1.2 | None | ERR6198395 | Other | La1.2 | None | ERR6140819 | Other | La1.8.2 | None | ERR6198204 | Other | La1.2 | None | ERR6198291 | Other | La1.2 | None | ERR6198210 | Other | La1.2 | None | ERR6198378 | Other | La1.2 | None | ERR6198444 | Other | La1.2 | None | ERR6198398 | Other | La1.2 | None | ERR6201800 | Other | La1.2 | None | ERR6358721 | MDR-TB | lineage4.6.5;lineage4.6.1.2 | None | SRR21732416 | Other | lineage4.6.5 | None | ERR6397159 | Other | lineage4.6.5 | None | ERR7764348 | Other | lineage4.3.2 | None | ERR7764393 | Sensitive | lineage4.3.4.1 | None | ERR7764375 | Sensitive | lineage4.8 | None | ERR7764424 | Other | lineage4.1.1.3 | None | ERR8650529 | MDR-TB | lineage4.3.3 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR11050114 | Sensitive | lineage4.7 | None | ERR9117701 | MDR-TB | lineage4.6.5 | None | ERR11050065 | Other | lineage4.6.5 | None | ERR9125562 | Other | lineage4.6.5 | None | ERR9285995 | Other | lineage4.6.5 | None | SRR1002684 | MDR-TB | lineage2.2.1 | None | ERR11050120 | Sensitive | lineage4.8;lineage4.7 | None | ERR11050214 | Sensitive | lineage4.8 | None | ERR11050181 | Sensitive | lineage3 | None | ERR11050212 | Sensitive | lineage4.2.2.2 | None | ERR11050204 | Sensitive | lineage4 | None | ERR11050224 | MDR-TB | lineage2.2.1 | None | SRR10809102 | MDR-TB | lineage4.6.5 | None | ERR11050229 | Sensitive | lineage4.1.1 | None | ERR11050449 | Sensitive | lineage2.2.1 | None | SRR10851741 | Sensitive | lineage4.3.4.1 | None | ERR11050383 | Sensitive | lineage2.2.1 | None | SRR14781854 | HR-TB | lineage4.8 | None | ERR11050485 | Sensitive | lineage4.6.2.2 | None | SRR13232618 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232650 | MDR-TB | lineage2.2.1 | None | SRR14781855 | MDR-TB | lineage4.2.1 | None | SRR14782241 | Sensitive | lineage2.2.1 | None | SRR14781949 | Sensitive | lineage2.2.1 | None | SRR14782248 | Sensitive | lineage4.3.3 | None | SRR14782293 | Other | lineage4.8 | None | SRR14782428 | Sensitive | lineage4.3.3 | None | SRR14782415 | Other | lineage4.2.1.1 | None | SRR14782484 | Other | lineage4.2.1.1 | None | SRR14782438 | Sensitive | lineage4.8 | None | SRR14782506 | Sensitive | lineage4.8 | None | SRR14782486 | MDR-TB | lineage2.2.1 | None | SRR14782773 | Sensitive | lineage4.3.4.1 | None | SRR14782507 | XDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR14782562 | MDR-TB | lineage2.2.1 | None | SRR14782578 | Sensitive | lineage2.2.1 | None | SRR14782592 | HR-TB | lineage4.2.1.1 | None | SRR14782684 | Other | lineage2.2.1 | None | SRR14782528 | MDR-TB | lineage2.2.1 | None | SRR14782668 | Sensitive | lineage2.2.1 | None | SRR14782701 | Pre-XDR-TB | lineage4.2.1 | None | SRR14801648 | Sensitive | lineage4.3.3 | None | SRR14782788 | Other | lineage2.2.1 | None | SRR14782811 | Sensitive | lineage4.1.2.1 | None | SRR14801452 | MDR-TB | lineage4.2.1 | None | ERR11050618 | Other | lineage4.6.5 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR14801744 | Sensitive | lineage2.2.1 | None | SRR14801996 | MDR-TB | lineage2.2.1 | None | SRR14802174 | Pre-XDR-TB | lineage4.2.1 | None | SRR15315911 | Other | lineage2.2.1 | None | SRR14801926 | Sensitive | lineage2.2.1 | None | ERR11050620 | Other | lineage4.6.5 | None | SRR18213916 | Other | lineage4.6.5 | None | SRR16058163 | Other | lineage4.6.5 | None | SRR16088109 | MDR-TB | lineage2.2.1 | None | SRR18715273 | Sensitive | lineage2.2.1 | None | SRR18714932 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715052 | MDR-TB | lineage2.2.1 | None | SRR18714888 | Pre-XDR-TB | lineage4.3.3 | None | SRR20139570 | HR-TB | lineage4.1.2.1 | None | SRR18715407 | MDR-TB | lineage2.2.1 | None | SRR18715415 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303788 | Sensitive | lineage4.8 | None | ERR11050795 | Sensitive | lineage4.8 | None | SRR19303775 | Other | lineage3 | None | SRR19303853 | Sensitive | lineage4.1.2.1 | None | SRR20139551 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR20139562 | RR-TB | lineage4.8 | None | SRR21658388 | Other | lineage4.6.5 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | ERR11050867 | MDR-TB | lineage4.6.5 | None | SRR23938695 | MDR-TB | lineage2.2.1 | None | SRR21661626 | Other | lineage4.6.5 | None | SRR21722055 | Other | lineage4.6.5 | None | ERR11068067 | MDR-TB | lineage4.6.5 | None | ERR11081049 | MDR-TB | lineage4.6.5 | None | ERR11081160 | MDR-TB | lineage4.6.5 | None | ERR11081688 | MDR-TB | lineage4.6.5 | None | ERR11082796 | Other | lineage4.6.5 | None | SRR21728327 | Other | lineage4.6.5 | None | ERR11081093 | MDR-TB | lineage4.6.5 | None | ERR11081207 | MDR-TB | lineage4.6.5 | None | ERR11081318 | MDR-TB | lineage4.6.5 | None | ERR11081348 | MDR-TB | lineage4.6.5 | None | ERR11082694 | MDR-TB | lineage4.6.5 | None | SRR6650394 | Sensitive | lineage3 | None | SRR6650379 | Sensitive | lineage4.5 | None | SRR6650230 | MDR-TB | lineage2.2.1 | None | SRR6650117 | Sensitive | lineage4.4.1.2 | None | SRR6650392 | Sensitive | lineage2.2.1 | None | SRR21732607 | Other | lineage4.6.5 | None | SRR6650302 | Sensitive | lineage3 | None | SRR21732062 | Other | lineage4.6.5 | None | SRR27332284 | Other | lineage4.6.5 | None | SRR26800463 | Other | lineage4.6.5 | None | SRR26800485 | Other | lineage4.6.5 | None | SRR3082086 | MDR-TB | lineage4.6.5 | None | SRR27332342 | Other | lineage4.6.5 | None | ERR4815152 | Other | lineage4.6.5 | None | SRR3082076 | MDR-TB | lineage4.6.5 | None | SRR3082085 | MDR-TB | lineage4.6.5 | None | ERR4817024 | HR-TB | lineage4.6.5 | None | SRR3085338 | MDR-TB | lineage4.6.5 | None | SRR3085337 | MDR-TB | lineage4.6.5 | None | SRR5818629 | Other | lineage4.6.5 | dj | ERR3275928 | Other | lineage4.6.5 | nl | ERR3275959 | Other | lineage4.6.5 | nl | ERR2432996 | Sensitive | lineage4.1.2 | None | SRR5818665 | Other | lineage4.6.5 | dj | SRR5818645 | Other | lineage4.6.5 | dj | SRR5818640 | MDR-TB | lineage4.6.5 | dj | ERR3275855 | Other | lineage4.6.5 | nl | SRR5818696 | MDR-TB | lineage4.6.5 | dj | SRR5818633 | MDR-TB | lineage4.6.5 | dj | SRR2100924 | Other | lineage4.6.5 | None | SRR5818574 | MDR-TB | lineage4.6.5 | dj | ERR4818444 | Other | lineage4.6.5 | None | ERR2512735 | Sensitive | lineage4.3.2 | None | ERR3275721 | Other | lineage4.6.5 | nl | ERR1023376 | Other | lineage4.6.5 | None | SRR20139565 | RR-TB | lineage4.1.2.1 | None | SRR20139569 | RR-TB | lineage4.1.2.1 | None | SRR23310997 | MDR-TB | lineage4.2.1 | None | SRR23310904 | MDR-TB | lineage4.2.1 | None | SRR23311023 | MDR-TB | lineage4.2.1 | None | ERR2516969 | MDR-TB | lineage4.6.5 | gb | SRR23311028 | Sensitive | lineage2.2 | None | ERR2677450 | MDR-TB | lineage4.6.5 | de | ERR278537 | Other | lineage4.6.5 | None | ERR4822294 | MDR-TB | lineage4.6.5 | None | ERR2517259 | MDR-TB | lineage4.6.5 | nl | ERR4831324 | MDR-TB | lineage4.6.5 | de | ERR2516289 | MDR-TB | lineage4.6.5 | be | ERR2517507 | Other | lineage4.6.5 | nl | ERR2517453 | Other | lineage4.6.5 | nl | ERR4829377 | MDR-TB | lineage4.6.5 | it | ERR4828796 | HR-TB | lineage4.6.5 | None | ERR4828839 | MDR-TB | lineage4.6.5 | None | ERR4828980 | MDR-TB | lineage4.6.5 | None | SRR6257040 | MDR-TB | lineage2.2.1 | None | ERR4828994 | MDR-TB | lineage4.6.5 | it | ERR4828873 | MDR-TB | lineage4.6.5 | None | ERR4829886 | Other | lineage4.6.5 | it | ERR4829100 | MDR-TB | lineage4.6.5 | dj | ERR4829436 | Other | lineage4.6.5 | it | SRR6896308 | Sensitive | lineage4.3.2.1 | None | ERR4830795 | MDR-TB | lineage4.6.5 | et | ERR4831233 | MDR-TB | lineage4.6.5 | None | ERR11067359 | Other | lineage4.6.5 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | ERR4829104 | MDR-TB | lineage4.6.5 | dj |
|---|
