Rv0407 - c.-32T>G
Drug resistance types
368 Sensitive
16 RR-TB
92 HR-TB
67 MDR-TB
24 Pre-XDR-TB
0 XDR-TB
107 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.1 | 4 |
| lineage4.9.1 | 4 |
| lineage4;lineage3.1.1 | 1 |
| lineage4.3.4.2.1 | 11 |
| lineage2.2.1 | 74 |
| lineage4.9;lineage3 | 2 |
| lineage1.1.2 | 24 |
| lineage4.1.2 | 4 |
| 11 | |
| lineage4.3.3 | 27 |
| lineage3 | 92 |
| lineage4.9 | 16 |
| lineage4.1.2.1 | 38 |
| lineage3.1.1 | 20 |
| lineage4.8.2 | 7 |
| lineage4.1.1.3 | 17 |
| lineage4.1.3 | 3 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4.5 | 12 |
| lineage1.2.2.2 | 10 |
| lineage4.6.4 | 2 |
| lineage3;lineage1.2.2.2 | 1 |
| lineage3.1.2 | 10 |
| lineage1.1.3 | 4 |
| lineage1.1.1.1 | 3 |
| lineage4.3.3;lineage2.2.1 | 2 |
| lineage4.3 | 2 |
| lineage4.3.4.2 | 8 |
| lineage6.2.1 | 1 |
| lineage1.2.1.2.1 | 10 |
| lineage4.2.1.1 | 3 |
| lineage4.3.2 | 4 |
| lineage4.6.2.2 | 20 |
| lineage4.1.1 | 10 |
| lineage4.6.1 | 1 |
| La1.8.1 | 31 |
| lineage4.1.1.3.1 | 11 |
| lineage4.8 | 18 |
| lineage2.2.1.2 | 1 |
| lineage4.2.2.2 | 5 |
| lineage4.3.1.1 | 3 |
| lineage4.4 | 2 |
| lineage4.4.2 | 5 |
| lineage3.1.2.2 | 5 |
| lineage4.2.1 | 2 |
| lineage1.1.3.1 | 12 |
| lineage3.1.2.1 | 3 |
| lineage2.2.2 | 5 |
| lineage4.4.1.1 | 6 |
| lineage4.6.1.1 | 2 |
| lineage4.2 | 1 |
| lineage4.7 | 4 |
| lineage2.2.1.1 | 9 |
| lineage4.3.2.1;lineage2.2.1.1 | 1 |
| lineage4.3.2.1 | 6 |
| lineage4 | 3 |
| lineage4.1.1.2 | 1 |
| La1.3 | 2 |
| lineage2.2 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.1 | 5 |
| lineage4;lineage2.2.1 | 2 |
| lineage2.1 | 2 |
| lineage6.1.3 | 3 |
| lineage6;lineage5.1;lineage4.2.2;lineage1.1.3.1;lineage1.1.1 | 1 |
| lineage3.1.3 | 2 |
| La2 | 3 |
| lineage4.8;lineage2.2.1 | 1 |
| lineage4.1.1.3;lineage1.1.2 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| La1.7.1 | 10 |
| lineage1.1.1 | 4 |
| lineage6 | 2 |
| lineage6.1.1 | 2 |
| lineage4.2.1;lineage2.2 | 1 |
| lineage4.8;lineage4.1.2.1 | 1 |
| lineage4.6.3 | 1 |
| lineage4.3.1 | 1 |
| lineage4;lineage3.1 | 2 |
| lineage4.2.2.1 | 1 |
| lineage1.1 | 1 |
| lineage5.1.1 | 1 |
| La1.2.BCG | 2 |
| lineage4.4.1.1.1 | 1 |
| La1.6 | 5 |
| lineage4.6.1.2 | 2 |
| lineage4.8.1 | 1 |
| lineage1.2.2 | 1 |
| La1.7 | 3 |
| La1.8.2 | 1 |
| lineage4.6 | 1 |
| lineage1.2.1.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage5 | 1 |
| lineage4.9;lineage3.1 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.1.4 | 1 |
| lineage4.8;lineage4.1.2 | 1 |
| lineage4.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 674 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR216930 | Sensitive | lineage4.3.4.1 | None | ERR216928 | Other | lineage4.9.1 | None | ERR216899 | Sensitive | lineage4;lineage3.1.1 | None | ERR216910 | Sensitive | lineage4.3.4.2.1 | None | ERR216966 | Sensitive | lineage2.2.1 | None | ERR216960 | Sensitive | lineage4.3.4.2.1 | None | ERR216959 | Other | lineage4.3.4.2.1 | None | ERR4817178 | Sensitive | lineage4.9;lineage3 | None | ERR216975 | Sensitive | lineage4.9.1 | None | ERR216976 | Sensitive | lineage1.1.2 | None | ERR221583 | Sensitive | lineage4.1.2 | None | ERR4816690 | Other | None | ERR2514503 | MDR-TB | lineage4.3.3 | None | ERR228105 | Sensitive | lineage3 | None | ERR4817674 | Sensitive | lineage4.9 | None | ERR2512964 | Sensitive | lineage4.1.2.1 | None | ERR228128 | Sensitive | lineage3.1.1 | None | ERR228121 | Sensitive | lineage4.8.2 | None | ERR228147 | Sensitive | lineage3 | None | ERR228135 | Sensitive | lineage4.1.1.3 | None | ERR228151 | Sensitive | lineage3 | None | SRR5065483 | Sensitive | lineage2.2.1 | None | ERR4817961 | Sensitive | lineage4.1.3 | None | ERR229974 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | ERR228172 | Sensitive | lineage4.5 | None | ERR228188 | Sensitive | lineage4.9 | None | ERR228249 | Sensitive | lineage3.1.1 | None | ERR230101 | Sensitive | lineage4.8.2 | None | ERR230019 | Sensitive | lineage1.2.2.2 | None | ERR230028 | Sensitive | lineage3.1.1 | None | ERR230064 | Sensitive | lineage4.6.4 | None | ERR230077 | Sensitive | lineage4.9 | None | ERR230081 | Sensitive | lineage3 | None | ERR230032 | Sensitive | lineage3;lineage1.2.2.2 | None | ERR230076 | Sensitive | lineage4.5 | None | ERR230107 | Sensitive | lineage3.1.2 | None | ERR230111 | Sensitive | lineage1.1.2 | None | ERR234217 | Sensitive | lineage1.1.3 | None | ERR2513581 | Sensitive | lineage1.1.1.1 | None | ERR234613 | MDR-TB | lineage4.3.3;lineage2.2.1 | None | ERR2513140 | Sensitive | lineage4.3 | None | ERR2515055 | Other | lineage3 | None | ERR234226 | Sensitive | lineage4.3.4.2 | None | ERR234677 | Sensitive | lineage6.2.1 | None | SRR5073925 | Sensitive | lineage2.2.1 | None | ERR245824 | Sensitive | lineage4.3.4.2.1 | None | ERR2503368 | Sensitive | lineage4.1.2.1 | None | ERR2503361 | Sensitive | lineage4.1.2.1 | None | ERR2503399 | HR-TB | lineage2.2.1 | None | ERR4818544 | Other | lineage1.2.1.2.1 | None | ERR2503474 | Sensitive | lineage4.2.1.1 | None | ERR2512735 | Sensitive | lineage4.3.2 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR4818578 | Other | lineage4.6.2.2 | None | ERR4818947 | Sensitive | lineage4.1.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007180 | Other | None | ERR4818619 | Sensitive | lineage3 | None | ERR4818634 | Other | lineage4.6.1 | None | ERR4817601 | Sensitive | lineage2.2.1 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | SRR5216875 | Other | La1.8.1 | None | ERR2513971 | Sensitive | lineage4.5 | None | SRR5216712 | Other | La1.8.1 | None | ERR2514060 | Sensitive | lineage4.1.1.3.1 | None | SRR5341256 | Other | lineage3 | None | SRR5216925 | Other | La1.8.1 | None | SRR5216976 | Other | La1.8.1 | None | ERR2514767 | Sensitive | lineage4.8 | None | ERR2514665 | Sensitive | lineage3.1.1 | None | ERR4821110 | Other | lineage2.2.1.2 | None | ERR2514823 | Other | lineage4.2.2.2 | None | ERR2514920 | Sensitive | lineage1.1.2 | None | ERR2514821 | Other | lineage2.2.1 | None | ERR4820122 | Other | lineage4.3.1.1 | None | ERR2653113 | MDR-TB | lineage4.8 | None | ERR2652978 | Sensitive | lineage4.3.4.2.1 | None | ERR2652984 | Sensitive | lineage4.3.2 | None | ERR270618 | Other | lineage4.4 | None | ERR270615 | Sensitive | lineage4.3.4.2.1 | None | ERR270625 | Sensitive | lineage4.4.2 | None | ERR270617 | Sensitive | lineage3 | None | ERR270628 | Sensitive | lineage4.8.2 | None | ERR270620 | Sensitive | lineage4.1.1.3.1 | None | ERR270729 | Sensitive | lineage3.1.2.2 | None | ERR270633 | Sensitive | lineage3.1.2.2 | None | ERR270623 | Sensitive | lineage3 | None | ERR270626 | Sensitive | lineage3 | None | ERR270653 | Sensitive | lineage4.1.2.1 | None | ERR270636 | Sensitive | lineage1.1.2 | None | ERR270738 | MDR-TB | lineage3 | None | ERR270734 | MDR-TB | lineage3 | None | ERR270730 | MDR-TB | lineage3 | None | ERR270637 | Sensitive | lineage2.2.1 | None | ERR270638 | Sensitive | lineage3 | None | ERR270641 | Other | lineage1.2.1.2.1 | None | ERR270644 | Sensitive | lineage1.1.2 | None | ERR270646 | Sensitive | lineage3 | None | ERR270649 | MDR-TB | lineage4.1.1.3 | None | ERR278585 | Sensitive | lineage3 | None | ERR270740 | Other | lineage4.2.1 | None | ERR270745 | HR-TB | lineage3 | None | ERR270741 | HR-TB | lineage3 | None | ERR270659 | HR-TB | lineage3 | None | ERR270655 | Other | lineage3 | None | ERR270657 | Sensitive | lineage3 | None | ERR270744 | Sensitive | lineage1.1.3.1 | None | ERR270667 | HR-TB | lineage1.1.2 | None | ERR270747 | HR-TB | lineage3 | None | ERR270663 | HR-TB | lineage1.2.2.2 | None | ERR270665 | HR-TB | lineage1.2.1.2.1 | None | ERR270749 | HR-TB | lineage3.1.2.1 | None | ERR270748 | HR-TB | lineage3 | None | ERR270679 | MDR-TB | lineage2.2.1 | None | ERR270755 | Sensitive | None | ERR270670 | HR-TB | lineage1.2.2.2 | None | ERR270678 | HR-TB | lineage1.2.2.2 | None | SRR20139565 | RR-TB | lineage4.1.2.1 | None | SRR20139569 | RR-TB | lineage4.1.2.1 | None | ERR270764 | HR-TB | lineage4.1.1.3 | None | ERR270686 | Pre-XDR-TB | lineage3.1.2 | None | ERR270769 | MDR-TB | lineage2.2.1 | None | ERR270766 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR270768 | MDR-TB | lineage4.1.2.1 | None | ERR270690 | HR-TB | lineage4.6.2.2 | None | ERR270762 | Sensitive | lineage4.1.1 | None | ERR278590 | Sensitive | lineage1.1.2 | None | ERR270692 | HR-TB | lineage3.1.2 | None | ERR270775 | HR-TB | lineage3 | None | ERR270693 | Pre-XDR-TB | lineage2.2.2 | None | ERR270779 | HR-TB | lineage3 | None | ERR270778 | HR-TB | lineage4.2.2.2 | None | ERR270794 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR270781 | HR-TB | lineage3.1.2 | None | ERR270801 | HR-TB | lineage4.1.2 | None | ERR278525 | MDR-TB | lineage4.8 | None | ERR270797 | RR-TB | lineage4.4.1.1 | None | ERR278526 | Sensitive | lineage4.3.4.1 | None | ERR266519 | Sensitive | lineage4.6.1.1 | None | ERR266527 | Sensitive | lineage4.1.1.3 | None | ERR266550 | Sensitive | lineage3 | None | ERR266548 | Other | lineage3.1.2.1 | None | ERR278532 | HR-TB | lineage1.1.3.1 | None | ERR266553 | Other | lineage2.2.1 | None | ERR270704 | HR-TB | lineage4.1.2.1 | None | ERR266578 | Sensitive | lineage1.2.2.2 | None | ERR266583 | Sensitive | lineage4.3.1.1 | None | ERR278540 | Sensitive | lineage3 | None | ERR270700 | HR-TB | lineage3 | None | ERR278538 | MDR-TB | lineage4.2.2.2 | None | ERR270707 | HR-TB | lineage4.2.2.2 | None | ERR266588 | Sensitive | lineage3 | None | ERR266579 | Sensitive | lineage1.1.2 | None | ERR266587 | Sensitive | lineage3.1.2 | None | ERR266591 | Sensitive | lineage3 | None | ERR278549 | Sensitive | lineage4.1.1 | None | ERR278543 | Sensitive | lineage4.3.4.1 | None | ERR278546 | Sensitive | lineage4.1.1 | None | ERR266607 | Sensitive | None | ERR4821178 | Sensitive | lineage4.9 | None | ERR278568 | Sensitive | lineage1.1.2 | None | ERR270714 | HR-TB | lineage1.2.1.2.1 | None | ERR278565 | Sensitive | lineage3 | None | ERR270719 | HR-TB | lineage4.3.3 | None | ERR4821974 | Other | lineage3 | None | ERR4821940 | Other | lineage4.9 | None | ERR4821633 | Sensitive | lineage4.9 | None | ERR4821571 | MDR-TB | lineage3.1.2 | None | SRR6045155 | Sensitive | lineage4.3.3 | None | SRR6045782 | HR-TB | lineage3 | None | SRR6045849 | Other | lineage4.4.1.1 | None | SRR6045925 | Other | lineage4.2 | None | SRR6045017 | Other | lineage3.1.2.2 | None | ERR278595 | Sensitive | lineage4.2.1.1 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045241 | Sensitive | lineage4.1.2.1 | None | SRR6045289 | Other | None | SRR6045295 | Other | lineage4.7 | None | ERR279568 | Sensitive | lineage4.8 | None | ERR278602 | Sensitive | lineage3 | None | ERR279471 | Sensitive | lineage2.2.1.1 | None | ERR279503 | Sensitive | lineage4.3.2.1;lineage2.2.1.1 | None | ERR279513 | Sensitive | lineage3 | None | ERR279521 | Sensitive | lineage2.2.1.1 | None | ERR279531 | Sensitive | lineage2.2.1.1 | None | ERR278605 | Sensitive | lineage1.1.3 | None | ERR279517 | Sensitive | lineage4.3.2.1 | None | ERR279601 | Sensitive | lineage4.3.2.1 | None | ERR279578 | Sensitive | lineage4.3.2.1 | None | ERR279644 | Other | lineage4.1.1.3 | None | ERR279612 | Sensitive | lineage4.3.2.1 | None | ERR279635 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR6046572 | Sensitive | lineage4.1.2.1 | None | SRR6046664 | MDR-TB | lineage3.1.2 | None | ERR279656 | Sensitive | lineage2.2.1 | None | SRR6046729 | Other | None | SRR6046851 | Other | lineage4 | None | SRR6458404 | Sensitive | lineage2.2.1 | None | ERR3077959 | Sensitive | lineage3.1.1 | None | SRR6257104 | MDR-TB | lineage2.2.1 | None | ERR3077951 | Sensitive | lineage4.3.4.2.1 | None | SRR6511627 | Sensitive | lineage4.3.3 | None | SRR6257083 | HR-TB | lineage4.3.3 | None | ERR294179 | Sensitive | lineage1.1.3.1 | None | ERR3077965 | MDR-TB | lineage3.1.1 | None | SRR6964520 | RR-TB | lineage4.5 | None | SRR6982087 | Sensitive | lineage2.2.1 | None | SRR6982204 | Sensitive | lineage2.2.1 | None | SRR6896588 | Sensitive | lineage4.7 | None | ERR495201 | HR-TB | lineage4.1.1 | None | ERR294248 | HR-TB | None | SRR6896155 | Sensitive | lineage3 | None | SRR6982180 | Sensitive | lineage4.1.1.2 | None | SRR6982009 | Sensitive | lineage3.1.1 | None | SRR6982296 | HR-TB | None | SRR6982323 | HR-TB | lineage4.3.4.2.1 | None | ERR3077942 | MDR-TB | lineage1.1.2 | None | SRR6982013 | Sensitive | lineage2.2.1 | None | ERR5165802 | HR-TB | lineage4.3.3 | None | ERR495010 | Sensitive | lineage4.1.1 | None | SRR8073644 | Other | La1.8.1 | None | ERR5165809 | Sensitive | lineage4.3.3 | None | ERR517399 | HR-TB | lineage4.6.2.2 | None | SRR8063654 | Other | La1.3 | None | SRR8073625 | Other | La1.8.1 | None | SRR833166 | Sensitive | lineage4.1.1.3 | None | SRR8073676 | Other | La1.8.1 | None | SRR832990 | Sensitive | lineage2.2 | None | SRR833180 | RR-TB | lineage2.2.1 | None | SRR9940989 | Sensitive | lineage4.9 | None | SRR9940977 | Other | lineage4.9 | None | SRR9940961 | Sensitive | lineage4.9 | None | SRR9940973 | Sensitive | lineage4.9 | None | SRR998810 | MDR-TB | lineage4.1.3 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR9940995 | Sensitive | lineage4.9 | None | SRR8600231 | Other | La1.8.1 | None | SRR998664 | Sensitive | lineage4.1.3 | None | SRR998713 | Sensitive | lineage4.1 | None | ERR019859 | MDR-TB | lineage4;lineage2.2.1 | None | DRR034530 | Sensitive | lineage1.1.1.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR025875 | Sensitive | lineage2.2.1 | None | ERR025881 | Sensitive | lineage2.1 | None | ERR067664 | Sensitive | lineage4.3.3 | None | ERR025892 | Other | lineage6.1.3 | None | ERR025880 | Sensitive | lineage2.1 | None | ERR028317 | Sensitive | lineage6;lineage5.1;lineage4.2.2;lineage1.1.3.1;lineage1.1.1 | None | ERR072016 | HR-TB | lineage4.6.2.2 | None | ERR072017 | MDR-TB | lineage4.1.1 | None | ERR072014 | Sensitive | lineage3 | None | ERR072060 | Sensitive | lineage3 | None | ERR072056 | Sensitive | lineage3 | None | ERR072059 | Sensitive | lineage3.1.2.2 | None | ERR1007898 | HR-TB | lineage3 | None | ERR072073 | Sensitive | lineage3 | None | ERR072066 | Other | lineage3.1.3 | None | ERR10430686 | Sensitive | La2 | None | ERR10748167 | MDR-TB | lineage4.3.3 | None | ERR114439 | HR-TB | lineage1.1.2 | None | ERR10748270 | MDR-TB | lineage4.1.1.3 | None | ERR10748157 | Pre-XDR-TB | lineage2.2.2 | None | ERR108170 | Sensitive | lineage4.3.3;lineage2.2.1 | None | ERR114422 | HR-TB | lineage4.1.2.1 | None | ERR114467 | Sensitive | lineage3 | None | ERR114449 | Sensitive | lineage4.1.2.1 | None | ERR117668 | Sensitive | lineage4.1.1.3.1 | None | ERR114487 | Sensitive | lineage4.1.1.3 | None | ERR117461 | MDR-TB | lineage2.2.1 | None | ERR117675 | MDR-TB | lineage1.1.2 | None | ERR117692 | Sensitive | lineage4.5 | None | ERR123932 | Sensitive | lineage1.1.2 | None | ERR123912 | Sensitive | lineage3 | None | ERR123933 | HR-TB | lineage1.1.3.1 | None | ERR133972 | MDR-TB | lineage4.8;lineage2.2.1 | None | ERR123949 | RR-TB | lineage4.1.1.3;lineage1.1.2 | None | ERR126611 | Sensitive | lineage4.9.1 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR133940 | MDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR351855 | Sensitive | lineage3 | None | ERR351913 | Sensitive | lineage4.1.1.3 | None | ERR351892 | Sensitive | lineage4.3.2.1 | None | ERR3587597 | Other | La1.7.1 | None | ERR369619 | HR-TB | lineage4.6.2.2 | None | ERR369599 | HR-TB | lineage4.6.2.2 | None | ERR3588243 | Sensitive | lineage4.3 | None | ERR369618 | HR-TB | lineage4.6.2.2 | None | ERR3799589 | Sensitive | lineage4.3.4.2 | None | ERR3799590 | Other | lineage6.1.3 | None | ERR369718 | HR-TB | lineage4.6.2.2 | None | ERR3799585 | Sensitive | lineage1.1.1 | None | ERR3803784 | Sensitive | lineage6 | None | ERR3803804 | Sensitive | lineage2.2.1 | None | ERR386781 | Sensitive | lineage3 | None | ERR386778 | Sensitive | lineage3 | None | ERR3803911 | Sensitive | lineage6.1.1 | None | ERR3803974 | Sensitive | lineage6 | None | ERR386811 | Sensitive | lineage3 | None | ERR387032 | Sensitive | lineage2.2.1 | None | ERR386820 | Other | lineage1.1.2 | None | ERR386857 | Other | lineage4.4 | None | ERR386877 | MDR-TB | lineage1.1.2 | None | ERR386918 | Sensitive | lineage4.1.1.3.1 | None | ERR386968 | Sensitive | lineage3 | None | ERR386887 | HR-TB | lineage4.6.2.2 | None | ERR386904 | Sensitive | lineage3 | None | ERR386945 | Sensitive | lineage3.1.2.1 | None | ERR387002 | MDR-TB | lineage3.1.1 | None | ERR387020 | Sensitive | lineage3 | None | ERR387042 | Sensitive | lineage3 | None | ERR403218 | MDR-TB | lineage2.2.1 | None | ERR387055 | HR-TB | lineage3 | None | ERR403229 | MDR-TB | lineage2.2.1 | None | ERR403222 | MDR-TB | lineage2.2.1 | None | ERR403227 | MDR-TB | lineage2.2.1 | None | ERR403230 | MDR-TB | lineage2.2.1 | None | ERR403235 | HR-TB | lineage2.2.1 | None | ERR403225 | HR-TB | lineage2.2.1 | None | ERR403233 | Sensitive | lineage4.3.3 | None | ERR403241 | HR-TB | lineage2.2.1 | None | ERR403232 | HR-TB | lineage2.2.1 | None | ERR403243 | MDR-TB | lineage4.2.1 | None | ERR403261 | HR-TB | lineage4.8 | None | ERR403250 | MDR-TB | lineage2.2.1 | None | ERR403255 | Sensitive | lineage4.3.3 | None | ERR403271 | MDR-TB | lineage2.2.1 | None | ERR403272 | Sensitive | lineage2.2.1 | None | ERR403277 | MDR-TB | lineage4.2.1;lineage2.2 | None | ERR403307 | MDR-TB | lineage2.2.1 | None | ERR403284 | Pre-XDR-TB | lineage2.2.1 | None | ERR403286 | MDR-TB | lineage2.2.1 | None | ERR403306 | Pre-XDR-TB | lineage2.2.1 | None | ERR403329 | Sensitive | lineage1.1.2 | None | ERR403323 | Sensitive | lineage4.3.3 | None | ERR403305 | MDR-TB | lineage2.2.1 | None | ERR403324 | MDR-TB | lineage2.2.1 | None | ERR403320 | Sensitive | lineage4.8;lineage4.1.2.1 | None | ERR403338 | Sensitive | lineage4.6.3 | None | ERR403333 | Sensitive | lineage4.1.1.3 | None | ERR403327 | Pre-XDR-TB | lineage2.2.1 | None | ERR403336 | Sensitive | lineage4.3.3 | None | ERR403343 | Other | lineage3 | None | ERR403344 | Sensitive | lineage6.1.1 | None | ERR403346 | Sensitive | lineage4.1.1.3.1 | None | ERR403362 | Sensitive | lineage3 | None | ERR403359 | Other | lineage2.2.1 | None | ERR403375 | Sensitive | lineage3.1.1 | None | ERR403370 | HR-TB | lineage4.1.2.1 | None | ERR403363 | Sensitive | lineage3.1.2 | None | ERR403381 | Sensitive | lineage3 | None | ERR403379 | MDR-TB | lineage1.1.2 | None | ERR403390 | Sensitive | lineage2.2.1.1 | None | ERR403371 | Sensitive | lineage1.1.2 | None | ERR403417 | Sensitive | lineage4.1.2.1 | None | ERR403393 | Sensitive | lineage3.1.2 | None | ERR403410 | Sensitive | lineage4.9;lineage3 | None | ERR403412 | Other | lineage4.1.2.1 | None | ERR405188 | Sensitive | lineage3.1.1 | None | ERR405192 | Sensitive | lineage3 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR405189 | Sensitive | lineage4.3.4.2 | None | ERR405198 | Sensitive | lineage4.3.4.2 | None | ERR405200 | Sensitive | lineage4.2.2.2 | None | ERR405208 | HR-TB | lineage4.1.2.1 | None | ERR405210 | Sensitive | lineage4.3.1 | None | ERR405218 | Sensitive | lineage3.1.1 | None | ERR4407458 | Sensitive | lineage4.1.2.1 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR405220 | Sensitive | lineage3.1.1 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR4407557 | Pre-XDR-TB | lineage4.2.2.1 | None | ERR4407512 | Sensitive | lineage1.1.2 | None | ERR4407532 | Sensitive | lineage1.1 | None | ERR4407461 | HR-TB | lineage2.2.1 | None | ERR4407503 | Sensitive | lineage4.1.2.1 | None | ERR600635 | HR-TB | lineage4.6.2.2 | None | ERR473340 | Sensitive | lineage1.1.2 | None | ERR600647 | HR-TB | lineage4.6.2.2 | None | ERR564286 | Other | La1.8.1 | None | ERR564378 | Other | La1.8.1 | None | ERR564421 | Other | La1.8.1 | None | ERR564465 | Other | La1.8.1 | None | ERR600638 | HR-TB | lineage4.6.2.2 | None | ERR600660 | HR-TB | lineage4.6.2.2 | None | ERR600656 | HR-TB | lineage4.6.2.2 | None | ERR600657 | HR-TB | lineage4.6.2.2 | None | ERR600652 | HR-TB | lineage4.6.2.2 | None | ERR600665 | HR-TB | lineage4.6.2.2 | None | ERR9027254 | Sensitive | lineage1.1.1.1 | None | ERR751989 | Sensitive | lineage4.5 | None | ERR775807 | Sensitive | lineage4.5 | None | ERR9027248 | Sensitive | lineage4.4.2 | None | ERR909753 | Other | lineage5.1.1 | None | ERR9117712 | Sensitive | lineage4.3.4.2 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117723 | Other | lineage4.1.1.3.1 | None | ERR9125888 | Other | La1.2.BCG | None | ERR9657198 | Sensitive | None | ERR9786014 | Sensitive | lineage1.1.1 | None | ERR9657201 | Sensitive | lineage1.2.1.2.1 | None | ERR9786116 | Sensitive | lineage4.7 | None | ERR9786035 | Sensitive | lineage2.2.1 | None | ERR9786144 | Sensitive | lineage4.3.4.2 | None | ERR9786196 | Sensitive | lineage4.3.4.1 | None | ERR9786352 | Sensitive | lineage4.1 | None | ERR9786331 | Sensitive | lineage4.1.2.1 | None | ERR9786273 | Sensitive | lineage4.8 | None | ERR9786303 | Sensitive | lineage4.1 | None | ERR9786330 | Sensitive | lineage4.3.4.2 | None | SRR023453 | Sensitive | lineage4.1.2.1 | None | ERR9787004 | Other | lineage4.1.2.1 | None | ERR9787003 | Sensitive | lineage4.1.1 | None | ERR9896160 | Sensitive | lineage4.1.2.1 | None | ERR9787108 | Other | lineage6.1.3 | None | SRR070011 | MDR-TB | lineage2.2.1.1 | None | SRR067504 | Sensitive | lineage3 | None | SRR1019143 | Pre-XDR-TB | lineage4.3.3 | None | SRR1013663 | Pre-XDR-TB | lineage2.2.2 | None | SRR1019159 | MDR-TB | lineage4.4.1.1.1 | None | SRR10272559 | Sensitive | lineage4.4.1.1 | None | SRR10993933 | Other | La1.6 | None | SRR10993932 | Other | La1.6 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR10993939 | HR-TB | La1.6 | None | SRR10993936 | Other | La1.6 | None | SRR1146278 | MDR-TB | lineage4;lineage2.2.1 | None | SRR10993948 | Other | La1.6 | None | SRR11418321 | Other | La1.7.1 | None | SRR11462884 | Other | La1.8.1 | None | SRR11535172 | Other | La1.8.1 | None | SRR11462921 | Other | La1.8.1 | None | SRR1165642 | MDR-TB | lineage4.4.1.1 | None | SRR1165633 | MDR-TB | lineage4.3.3 | None | SRR1165713 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1165657 | MDR-TB | lineage3.1.1 | None | SRR1165718 | MDR-TB | lineage4.8.1 | None | SRR1167359 | MDR-TB | lineage4.3.3 | None | SRR1167315 | MDR-TB | lineage2.2.2 | None | SRR1167273 | MDR-TB | lineage4.3.3 | None | SRR1167351 | MDR-TB | lineage3.1.1 | None | SRR1172423 | Sensitive | lineage2.2.1 | None | SRR1167382 | MDR-TB | lineage2.2.1 | None | SRR1172071 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173544 | MDR-TB | lineage4.6.1.2 | None | SRR1173375 | MDR-TB | lineage2.2.1 | None | SRR1180247 | Sensitive | lineage1.2.2 | None | SRR1173561 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181212 | Sensitive | lineage2.2.1 | None | SRR1181123 | Sensitive | lineage4.1.1.3 | None | SRR1181106 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR11972416 | MDR-TB | lineage2.2.1.1 | None | SRR11871415 | MDR-TB | lineage2.2.1 | None | SRR11972194 | HR-TB | lineage2.2.1.1 | None | SRR11972421 | MDR-TB | lineage2.2.1 | None | SRR12199429 | Sensitive | lineage1.1.1 | None | SRR11972448 | Sensitive | lineage1.1.3 | None | SRR11972427 | Pre-XDR-TB | lineage2.2.1 | None | SRR12199473 | Sensitive | lineage1.2.1.2.1 | None | SRR12199469 | Sensitive | lineage1.1.1 | None | SRR14088354 | Sensitive | lineage3 | None | SRR13870378 | Pre-XDR-TB | lineage4.3.3 | None | SRR13986560 | Other | La1.7 | None | SRR12634638 | Sensitive | lineage4.3.3 | None | SRR13870427 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13888778 | Sensitive | La2 | None | SRR14296106 | Other | La1.8.1 | None | SRR14296114 | Other | La1.7.1 | None | SRR14296188 | Other | La1.8.1 | None | SRR14296170 | Other | La1.8.1 | None | SRR14296395 | Other | La1.8.1 | None | SRR15296920 | HR-TB | La1.7.1 | None | SRR16096977 | RR-TB | lineage2.2.1 | None | SRR15296943 | Other | La1.7.1 | None | SRR15296967 | Other | La1.8.2 | None | SRR16089625 | Sensitive | lineage4.1.2.1 | None | SRR1573722 | Sensitive | lineage4.4.2 | None | SRR16058264 | Other | La1.2.BCG | None | SRR16151369 | Sensitive | lineage2.2.1 | None | SRR16097539 | HR-TB | lineage4.5 | None | SRR16100720 | Other | lineage1.1.3.1 | None | SRR16101269 | Sensitive | lineage4.4.2 | None | SRR16100237 | HR-TB | lineage4.1.2.1 | None | SRR16101272 | Sensitive | lineage4.3.3 | None | SRR16115024 | RR-TB | lineage2.2.1 | None | SRR16370457 | MDR-TB | lineage4.8 | None | SRR16370348 | Sensitive | lineage4.7 | None | SRR16370412 | MDR-TB | lineage1.2.1.2.1 | None | SRR1735588 | Sensitive | lineage2.2.1 | None | SRR17156547 | Other | La1.7 | None | SRR17156544 | Other | La1.7 | None | SRR18213665 | Sensitive | lineage4.6 | None | SRR1791711 | Other | La1.3 | None | SRR1791727 | Other | La1.8.1 | None | SRR1792454 | Other | La1.8.1 | None | SRR18213663 | Sensitive | lineage1.1.3.1 | None | SRR1791866 | Other | La1.7.1 | None | SRR1791942 | Other | La1.8.1 | None | SRR1792499 | Other | La1.7.1 | None | SRR18213693 | Sensitive | lineage3.1.1 | None | SRR18213667 | Sensitive | lineage4.3.1.1 | None | SRR18213686 | HR-TB | lineage3 | None | SRR18213674 | Sensitive | lineage4.5 | None | SRR18213683 | Sensitive | lineage1.2.1.1 | None | SRR18213697 | Other | lineage2.2.1.1 | None | SRR18213708 | RR-TB | lineage4.4.1.1 | None | SRR18213711 | Sensitive | lineage3 | None | SRR18213695 | Sensitive | lineage1.1.2 | None | SRR18213705 | Sensitive | lineage3 | None | SRR18213717 | Sensitive | lineage4.5 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213733 | HR-TB | lineage4.1.1.3 | None | SRR18213779 | Sensitive | lineage4.8 | None | SRR18213747 | Sensitive | lineage3 | None | SRR18213735 | HR-TB | lineage1.2.1.2.1 | None | SRR18213763 | Sensitive | lineage4.8 | None | SRR18213767 | Sensitive | lineage1.1.3 | None | SRR18213781 | Sensitive | lineage4.8.2 | None | SRR18213803 | Sensitive | lineage3 | None | SRR18213801 | Sensitive | lineage3 | None | SRR18213798 | Sensitive | lineage4.8.2 | None | SRR18213788 | HR-TB | lineage4.6.2.2 | None | SRR18213817 | Sensitive | lineage3 | None | SRR18213808 | Sensitive | lineage4.1.1.3 | None | SRR18213802 | HR-TB | lineage1.1.3.1 | None | SRR18213819 | Sensitive | lineage4.8.2 | None | SRR18213831 | Sensitive | lineage3.1.1 | None | SRR18213833 | Sensitive | lineage4.1.2.1 | None | SRR18213836 | Sensitive | lineage3 | None | SRR18213846 | Sensitive | lineage4.1.2.1 | None | SRR18213852 | HR-TB | lineage3 | None | SRR18213858 | Sensitive | lineage4.1.2.1 | None | SRR18213857 | Pre-XDR-TB | lineage3.1.2 | None | SRR18213825 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR18213829 | HR-TB | lineage1.2.2.2 | None | SRR18213844 | Sensitive | lineage3 | None | SRR18213845 | Sensitive | lineage4.9 | None | SRR18213848 | Sensitive | lineage3 | None | SRR18213851 | Other | lineage2.2.1 | None | SRR18213856 | Sensitive | lineage4.8 | None | SRR18213869 | Sensitive | lineage4.1.1.3 | None | SRR18213885 | Sensitive | lineage3.1.3 | None | SRR18213878 | Sensitive | lineage1.2.2.2 | None | SRR18213879 | Sensitive | lineage1.1.2 | None | SRR18213877 | Sensitive | lineage4.1.1.3.1 | None | SRR18213880 | Sensitive | lineage3 | None | SRR18213883 | Sensitive | lineage3 | None | SRR18213889 | Sensitive | lineage3 | None | SRR18213921 | Sensitive | lineage2.2.1 | None | SRR18213891 | Sensitive | lineage3 | None | SRR18213908 | Sensitive | lineage3 | None | SRR18213917 | Sensitive | lineage1.1.2 | None | SRR18213912 | Sensitive | lineage3 | None | SRR18213898 | Sensitive | lineage4.8 | None | SRR18213905 | MDR-TB | lineage2.2.1 | None | SRR18213925 | Sensitive | lineage1.2.2.2 | None | SRR18213927 | Sensitive | lineage4.5 | None | SRR18213944 | Sensitive | lineage3 | None | SRR18213935 | Sensitive | lineage3 | None | SRR18213959 | Sensitive | lineage3 | None | SRR18213951 | Other | lineage3 | None | SRR18213946 | Sensitive | lineage4.1.1.3.1 | None | SRR18213947 | Sensitive | lineage4.1.2.1 | None | SRR18213954 | Sensitive | lineage3 | None | SRR18213955 | Sensitive | lineage3.1.1 | None | SRR18213957 | Sensitive | lineage4.2.1.1 | None | SRR18213973 | Sensitive | lineage3 | None | SRR18213963 | Sensitive | lineage1.2.2.1 | None | SRR18213971 | Sensitive | lineage3.1.2.2 | None | SRR18391667 | Other | La1.7.1 | None | SRR18213965 | Sensitive | lineage3 | None | SRR19320495 | HR-TB | lineage1.2.1.2.1 | None | SRR18391709 | Other | La1.7.1 | None | SRR18391722 | HR-TB | La1.7.1 | None | SRR18911128 | RR-TB | lineage2.2.1 | None | SRR18911559 | Sensitive | lineage4.3.3 | None | SRR18912983 | Sensitive | lineage2.2.1 | None | SRR18913786 | Sensitive | lineage3 | None | SRR19320496 | Sensitive | lineage4.1.2.1 | None | SRR20551047 | Sensitive | La2 | None | SRR19976652 | Sensitive | lineage4.9 | None | SRR20139570 | HR-TB | lineage4.1.2.1 | None | SRR2101605 | Sensitive | lineage2.2.1 | None | SRR2100829 | HR-TB | lineage4.3.3 | None | SRR2101551 | Sensitive | lineage4.3.2.1 | None | SRR2101250 | Sensitive | lineage4.1.1.3 | None | SRR21657200 | Sensitive | lineage3 | None | SRR2101754 | RR-TB | lineage2.2.1 | None | SRR21239903 | Sensitive | lineage4.3.3 | None | SRR21657457 | Sensitive | lineage4.3.3 | None | SRR21663276 | Sensitive | lineage4.1.1 | None | SRR21675438 | Sensitive | lineage4.4.2 | None | SRR21675609 | HR-TB | lineage4.1.2 | None | SRR21675852 | Sensitive | lineage2.2.1 | None | SRR21675607 | Sensitive | lineage4.8 | None | SRR21678380 | Sensitive | lineage4.1.2 | None | SRR21677062 | Sensitive | lineage4.8 | None | SRR21675939 | Sensitive | lineage4.3.3 | None | SRR21676316 | Sensitive | lineage4.3.2 | None | SRR21677052 | HR-TB | lineage4.8 | None | SRR21677256 | Sensitive | lineage2.2.1 | None | SRR21678369 | Sensitive | lineage5 | None | SRR21686099 | Sensitive | lineage2.2.1 | None | SRR21722109 | Sensitive | lineage4.1.1 | None | SRR21710919 | Sensitive | lineage3 | None | SRR21708922 | Sensitive | lineage4.8 | None | SRR21722232 | Sensitive | lineage1.2.1.2.1 | None | SRR21736380 | Sensitive | lineage4.3.2 | None | SRR21722233 | Sensitive | lineage1.1.2 | None | SRR21722249 | Sensitive | lineage4.1.1.3 | None | ERR551254 | Sensitive | lineage4.1.2.1 | None | ERR1873399 | Pre-XDR-TB | lineage2.2.1 | None | ERR550964 | Sensitive | lineage4.6.2.2 | None | ERR551069 | HR-TB | lineage4.1 | None | ERR553164 | HR-TB | lineage4.1.2.1 | None | ERR551848 | Other | lineage4.6.4 | None | ERR552522 | Sensitive | lineage4 | None | ERR553165 | HR-TB | lineage4.1 | None | ERR552309 | Sensitive | lineage4.3.3 | None | ERR553032 | Sensitive | lineage4.3.4.2 | None | SRR6650345 | Other | lineage1.1.3.1 | None | ERR5758350 | Pre-XDR-TB | lineage2.2.2 | None | SRR6650379 | Sensitive | lineage4.5 | None | SRR6797635 | Other | lineage2.2.1 | None | SRR6650285 | Sensitive | lineage4.8 | None | SRR6650394 | Sensitive | lineage3 | None | SRR6650117 | Sensitive | lineage4.4.1.2 | None | SRR6650206 | HR-TB | lineage1.1.3.1 | None | SRR6650365 | Sensitive | lineage2.2.1 | None | SRR6650392 | Sensitive | lineage2.2.1 | None | SRR6650391 | Sensitive | lineage1.1.3.1 | None | SRR6650210 | Sensitive | lineage1.1.3.1 | None | SRR6650423 | HR-TB | lineage3 | None | ERR4815135 | Sensitive | lineage3 | None | SRR6650302 | Sensitive | lineage3 | None | ERR190340 | HR-TB | lineage4.9;lineage3.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR4814435 | Sensitive | lineage3 | None | ERR498362 | HR-TB | lineage4.1.2.1 | None | ERR4815761 | Sensitive | lineage4.9 | None | ERR158600 | Sensitive | lineage1.1.3.1 | None | ERR4815703 | Sensitive | lineage4.9 | None | ERR4815413 | Other | lineage4.3.4.2.1 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR163952 | Sensitive | lineage1.1.3.2 | None | ERR4814610 | Sensitive | lineage3 | None | ERR1679585 | MDR-TB | lineage4.6.2.2 | None | ERR181771 | Sensitive | lineage3.1.1 | None | ERR1750943 | Sensitive | lineage4 | None | ERR3148149 | RR-TB | lineage4.1.4 | None | ERR1750941 | Sensitive | lineage4.8;lineage4.1.2 | None | ERR1750938 | Other | lineage4.4.1 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR192094 | Other | La1.8.1 | None | ERR181887 | HR-TB | None | ERR4815014 | RR-TB | lineage4.1.2.1 | None | ERR192058 | Other | La1.8.1 | None | ERR192068 | Other | La1.8.1 | None | ERR192082 | Other | La1.8.1 | None | ERR4815864 | Sensitive | lineage4.9 | None | ERR192074 | Other | La1.8.1 | None | ERR192087 | Other | La1.8.1 | None | ERR192107 | Other | La1.8.1 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR192129 | Other | La1.8.1 | None | SRR1723675_SRR1723674 | Pre-XDR-TB | lineage2.2.1 | None | ERR212015 | Sensitive | lineage4.8 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR192109 | Other | La1.8.1 | None | ERR212001 | HR-TB | None | ERR212082 | Sensitive | lineage4.9.1 | None |
|---|
