| lineage3 |
4613 |
| lineage2.2.1 |
12093 |
| lineage2.2.2 |
896 |
| lineage1.2.2.2 |
741 |
| lineage1.2.1.2.1 |
838 |
| lineage1.1.1 |
473 |
| lineage2.2.1.2 |
125 |
| lineage1.1.2 |
1247 |
| lineage3.1.1 |
784 |
| lineage2.1 |
204 |
| lineage4.1.2.1;lineage1.1.2 |
3 |
| lineage2.2.1.1 |
1546 |
| lineage1.1.1.1 |
687 |
| lineage2.2 |
561 |
| La1.7.1 |
46 |
| lineage1.1.3 |
62 |
| lineage3.1.2.1 |
302 |
| M.bovis |
188 |
| lineage3.1 |
96 |
| lineage4;lineage3 |
15 |
| lineage5.1.2 |
28 |
| lineage1.1.3.1 |
187 |
| lineage4.4.2;lineage2.2.1 |
7 |
| La1.7.X-unk4 |
9 |
| lineage4.1.1.3;lineage1.1.3.2 |
2 |
| lineage3.1.2 |
460 |
| lineage4.4.1.2;lineage2.2.1 |
2 |
| lineage5.1 |
32 |
| lineage3.1.3 |
156 |
| lineage1.2.2.1 |
147 |
| lineage5 |
9 |
| lineage5.1.3 |
14 |
| lineage5.1.4 |
46 |
| lineage1.1.3.3 |
75 |
| lineage6.3.1 |
81 |
| lineage4.1;lineage1.1 |
1 |
| lineage6.2.3 |
12 |
| lineage1.2.1.2 |
115 |
| lineage1.1.3.2 |
210 |
| lineage6 |
22 |
| |
44 |
| La3 |
50 |
| La1.6 |
8 |
| La1.4 |
26 |
| lineage5.1.1 |
128 |
| lineage4;lineage1.1.2 |
7 |
| lineage6.3.2 |
9 |
| lineage4;lineage1.2.2.1 |
4 |
| La1.8.1 |
856 |
| La1.2.BCG |
58 |
| lineage4.3.4.2.1;lineage2.2.1 |
4 |
| lineage4.3.3;lineage1.1.2 |
1 |
| lineage1.2.1.1 |
91 |
| lineage4.5;lineage2.2.1 |
10 |
| lineage5.1.1;lineage4.8 |
1 |
| lineage4.2.2.2;lineage2.2.1 |
2 |
| lineage4.4.1.1;lineage3;lineage1.2.2.2 |
1 |
| lineage7 |
57 |
| lineage6.2.1 |
17 |
| La2 |
16 |
| lineage4.1.1.3;lineage3 |
2 |
| lineage3;lineage2.2.1 |
17 |
| lineage3.1.3;lineage3.1.1 |
1 |
| lineage4.2.2;lineage1.1.1 |
1 |
| lineage4.2.2.2;lineage3.1.2 |
1 |
| lineage3.1.2.2 |
56 |
| lineage3.1;lineage2.2.1 |
1 |
| lineage6.1.1 |
18 |
| lineage2.2.1;lineage1.1.1.1 |
17 |
| lineage4;lineage1.2.2.2 |
6 |
| lineage4.3.2.1;lineage1.2.2.2 |
1 |
| lineage1.1 |
26 |
| lineage6.2.2;lineage4 |
1 |
| lineage4.9;lineage2.2.1 |
5 |
| lineage4.3.3;lineage1.1.3.1 |
1 |
| lineage4;lineage2.2.1 |
36 |
| lineage4.4.2;lineage1.2.1.2.1 |
1 |
| lineage5.2 |
32 |
| lineage4.3;lineage2.2.1 |
1 |
| lineage3.1.2;lineage1.2.2.2 |
1 |
| lineage6.2.2 |
12 |
| lineage4.3.3;lineage2.2.1 |
20 |
| lineage2.2.2;lineage2.2.1 |
10 |
| lineage4.4;lineage1.1.2 |
1 |
| La1.8.2 |
10 |
| lineage4.5;lineage2.2.1.1 |
1 |
| lineage9 |
3 |
| lineage3.1.2;lineage2.2.1 |
2 |
| lineage3;lineage2.2.1.1 |
4 |
| lineage1 |
8 |
| lineage4.1.2;lineage1.2.2.2 |
1 |
| lineage4.4.1.1 |
4 |
| lineage5.3 |
15 |
| lineage4.4.1.1;lineage2.2.1 |
20 |
| lineage4.3.2.1;lineage2.2.1 |
5 |
| lineage4.3.3;lineage3 |
6 |
| lineage4.3.4.2.1;lineage1.1.3.2 |
4 |
| lineage4.8;lineage2.2.1.1 |
1 |
| lineage4;lineage3.1.2 |
2 |
| lineage1.2.2.2;lineage1.1.3.2 |
3 |
| lineage4.3.3 |
3 |
| lineage4.3.4.2.1;lineage2.2.1.1 |
2 |
| lineage3.1.1;La1.1 |
4 |
| lineage4.1.1.3.1;lineage3.1.2 |
1 |
| lineage4.1.2;lineage1.1.2 |
2 |
| lineage4.3.2;lineage2.2.1 |
5 |
| lineage5.1.5 |
13 |
| lineage4.1.2.1;lineage2.2.1 |
10 |
| lineage4;lineage3.1.1 |
6 |
| lineage1.2.2.2;lineage1.1.2 |
6 |
| lineage4.1.2;lineage2.2.1 |
2 |
| lineage4.8;lineage1.1.2 |
2 |
| lineage4.8;lineage2.2.1 |
9 |
| lineage4.9;lineage1.1.2 |
1 |
| lineage4.7;lineage2.2.1 |
1 |
| lineage4.3.4.2.1;lineage1.1.2 |
2 |
| lineage4.1.1.3;lineage2.2.1 |
3 |
| lineage2.2.1;lineage1.1.1 |
5 |
| lineage4.1.2.1;lineage1.1.3.2 |
1 |
| M.orygis |
13 |
| lineage4.4.2;lineage3;lineage1.1.3.1 |
1 |
| lineage4.2.1;lineage2.2.1 |
9 |
| lineage4.3.2.1;lineage3.1.1 |
1 |
| La1.2 |
34 |
| lineage4.3.4.2.1;lineage3 |
2 |
| lineage6.1.3 |
4 |
| lineage6.3.3 |
12 |
| lineage6;lineage4.6.2.2 |
1 |
| lineage6.3.1;lineage5.1.2 |
1 |
| lineage3;lineage1.1.2 |
5 |
| lineage4.1.2.1 |
3 |
| lineage4.3.3;lineage2.2.1.1 |
2 |
| lineage4.2.2;lineage2.2.1 |
2 |
| lineage4.1.1.3;lineage1.1.2 |
1 |
| lineage4.3.4.2.1;lineage3.1.2 |
3 |
| lineage3.1.1;lineage1.1.3.2 |
3 |
| lineage4.8 |
2 |
| La1 |
5 |
| lineage2.2.1;lineage1.1.2 |
9 |
| lineage4.3.4.2;lineage3;lineage1.1.3.2 |
1 |
| lineage4.4.1.1;lineage3 |
3 |
| lineage4.3.4.2;lineage2.2.1 |
2 |
| lineage1.2.2.2;lineage1.1.3 |
2 |
| lineage5.3;lineage4.1.2.1 |
1 |
| lineage2.2.2;lineage2.2.1.1 |
3 |
| lineage4.3.4.2.1 |
4 |
| lineage1.2.1 |
7 |
| lineage4.1;lineage2.2.1 |
2 |
| lineage4.7;lineage1.1.3.1 |
1 |
| lineage6.1.3;lineage2.2.1 |
1 |
| lineage4;lineage3.1.3 |
3 |
| lineage2.2.1.1;lineage2.1 |
1 |
| lineage3.1.2.1;lineage1.1.2 |
1 |
| lineage4.1;lineage3 |
1 |
| lineage4.4.1.1.1;lineage3.1.1 |
1 |
| lineage4.3.2.1;lineage2.2.2 |
2 |
| lineage1.1.3.3;lineage1.1.2 |
1 |
| lineage4.1.1.3;lineage2.2.1.2 |
1 |
| lineage3;lineage1.2.2.2 |
4 |
| lineage4.8;lineage3 |
3 |
| lineage4.6.1.2;lineage4.1.2 |
1 |
| lineage4;lineage3.1.1;lineage1.1.3.2 |
1 |
| lineage4.3.4.1;lineage2.2.1.1 |
1 |
| La1.3 |
3 |
| lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3.1.1;lineage2.2.1 |
1 |
| La1.7.X-unk5 |
1 |
| lineage4.7;lineage3 |
2 |
| lineage4.8;lineage3.1 |
1 |
| lineage4.3.2.1;lineage2.2.1.1 |
6 |
| lineage4.1.2.1;lineage3;lineage2.2.1.1 |
1 |
| lineage4.3.4.2.1;lineage3.1.1 |
4 |
| lineage4.3.2.1;lineage3 |
1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 |
1 |
| lineage2 |
9 |
| lineage4.1.2.1;lineage2.2 |
3 |
| lineage2.2;lineage1 |
1 |
| La1.8 |
2 |
| lineage4.4.2;lineage2.2 |
2 |
| lineage4.2.1 |
2 |
| lineage4;lineage1.2.1.1 |
1 |
| lineage5.1.2;lineage5.1.1 |
1 |
| lineage1.1.3.2;lineage1.1.2 |
1 |
| lineage4.2.2;lineage1.1.2 |
2 |
| lineage2.2.1;lineage1.2.1.2.1 |
3 |
| lineage6.1.2 |
5 |
| lineage4.3.4;lineage3.1.1 |
1 |
| lineage1.2.2 |
1 |
| lineage4.9;lineage3.1.2.1 |
1 |
| lineage4.9;lineage3.1.2 |
1 |
| lineage4.3.4.2.1;lineage1.2.2.1 |
3 |
| lineage4.1.1.3.1 |
1 |
| lineage4.4.2;lineage1.1.1.1 |
2 |
| lineage4.3.3;lineage1.2.1.2.1 |
1 |
| lineage4.8;lineage3.1.2 |
2 |
| lineage4.8;lineage1.1.1 |
1 |
| lineage4.1.2 |
1 |
| lineage2.2.1.1;lineage1.1.1.1 |
1 |
| lineage4.3.3;lineage1.2.2.2 |
1 |
| lineage4.1.1;lineage2.2.1.1 |
1 |
| lineage3.1.2.1;lineage2.2.1 |
1 |
| lineage4.7;lineage4.4.1;lineage4.3.4.2.1;lineage4.3.3;lineage2.2.1;lineage1.1.3 |
1 |
| lineage4;lineage1.1.3.2 |
4 |
| lineage4;La1.2.BCG |
1 |
| lineage2.2.1.2;lineage1.1.1 |
1 |
| lineage4.9;lineage2.2.1;lineage1 |
1 |
| lineage4;lineage2.2.1.1 |
3 |
| lineage4.5;lineage3 |
2 |
| lineage3;M.bovis |
1 |
| lineage2.2.1.1;lineage1.1.1 |
1 |
| lineage3;lineage1.2.1.2.1 |
1 |
| lineage4.9;lineage3 |
2 |
| lineage2.2.1;lineage1.2.1.2 |
1 |
| M.orygis;M.bovis |
1 |
| lineage4;lineage1.2.1.2.1 |
1 |
| lineage4.4;lineage4.3.4.2.1;lineage1.1.2 |
1 |
| lineage5.1.2;lineage4.1.1.3 |
1 |
| lineage3.1.2;lineage2.2.1.1 |
2 |
| lineage3;lineage1.1.3.1 |
1 |
| lineage4.2.1.1;lineage2.2 |
1 |
| lineage4.1.1.3;lineage2.2.2 |
1 |
| lineage4.1.2;lineage3 |
2 |
| lineage4.4.1.1.1;lineage2.2.1 |
1 |
| lineage2.2.1;lineage1.1.3 |
1 |
| lineage4.8;lineage1.2.2.2 |
1 |
| lineage4.1;lineage1.1.1.1 |
1 |
| lineage4.2.1;lineage2.2.1.1 |
1 |
| lineage4.2.2.2;lineage3 |
1 |
| M.caprae |
1 |
| lineage4.6.2;lineage3 |
1 |
| lineage4;lineage1.1.3.3 |
1 |
| lineage4.1.1.2;lineage3 |
1 |
| lineage4.9;lineage3.1.1 |
1 |
| La1.1 |
3 |
| lineage4.1.1;lineage2.2.1 |
4 |
| lineage4.4;lineage3 |
1 |
| lineage4.8.2;lineage3.1.3 |
1 |
| lineage2.2.1;M.orygis |
1 |
| lineage4.5;lineage3.1.2 |
1 |
| lineage4;lineage3.1.2.1 |
2 |
| lineage4.1.1.3;lineage1.2.2.2 |
1 |
| lineage1.1.3.3;lineage1.1.1 |
1 |
| lineage4.1.1.3 |
2 |
| lineage4.4;lineage2.2.1 |
1 |
| lineage4.9;lineage4.1.1.3;lineage3;lineage2.2.1 |
1 |
| lineage6.2.2;lineage4.3.3 |
1 |
| lineage2.2.1;lineage1.1 |
1 |
| lineage4.4.2;lineage2.2.1.1 |
1 |
| lineage4.9;lineage2.2.2 |
1 |
| lineage4.3.4.2;lineage3.1.1 |
1 |
| lineage4.1;lineage1.1.2 |
1 |
| lineage4.6;lineage2.2.1 |
1 |
| lineage4.9;lineage4.3.4.2.1;lineage4.1;lineage3.1.1;lineage1.1.3.2 |
1 |
| lineage6.3.1;lineage5.1.2;lineage5.1.1 |
1 |
| lineage2.2.1;lineage1.2.2.2 |
4 |
| lineage6.2.3;lineage4.1.3;lineage4.1.2.1 |
1 |
| lineage4.2;lineage2.2.1 |
1 |
| lineage4.3.4.1;lineage1.1.2 |
1 |
| lineage4.6.5;lineage3 |
1 |
| lineage2.2;lineage1.1.1.1 |
1 |
| lineage4.1.2;lineage3.1.1 |
1 |
| lineage4.3.4.2.1;lineage2.2 |
1 |
| lineage4;lineage3.1.2.1;lineage2.2.1;lineage1.2.2.2 |
1 |
| lineage4.3.2.1;lineage3.1.2 |
1 |
| lineage4.3.4.2.1;lineage1.2.2.2 |
1 |
| lineage6.3 |
1 |
| La1.8.2;La1.2 |
1 |
| lineage4.1.2;lineage1.1.3.2 |
1 |
| lineage4.3.4.1;lineage3.1.2 |
1 |
| lineage4.9 |
1 |
| lineage4.1.2.1;lineage3 |
1 |