Rv0407 - p.Asn82Thr
Drug resistance types
120 Sensitive
8 RR-TB
12 HR-TB
10 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
59 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 16 |
| La1.2.BCG | 1 |
| lineage4.3.2 | 2 |
| lineage3 | 28 |
| lineage3.1.2 | 6 |
| lineage4.8 | 11 |
| lineage4.4.1.1 | 3 |
| lineage4.1.1.3 | 7 |
| La2 | 2 |
| lineage4.6.2.2 | 5 |
| lineage4.3.4.2.1 | 6 |
| lineage2.2.1 | 16 |
| lineage1.2.2.1 | 1 |
| lineage4.1.2 | 3 |
| lineage4.1.1.3.1 | 3 |
| lineage4.4.1.2 | 2 |
| lineage1.2.2.2 | 4 |
| lineage4.4.2 | 2 |
| La1.6 | 1 |
| lineage1.2.1.2.1 | 4 |
| lineage4.6.1.1 | 4 |
| lineage4.1.3;lineage4.1.1.1 | 1 |
| La1.2 | 2 |
| La1.8.1 | 5 |
| La1.3 | 1 |
| La1.7.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.8.2 | 1 |
| lineage4.3.3 | 4 |
| lineage4.3.1.1 | 3 |
| lineage4.1.2.1 | 9 |
| lineage4.3.2.1 | 3 |
| lineage2.2 | 3 |
| lineage4.1.1 | 3 |
| lineage4.5 | 4 |
| lineage4;lineage1.2.2.1 | 1 |
| lineage1.1.3.1 | 9 |
| 4 | |
| lineage1 | 1 |
| lineage1.1.3 | 2 |
| lineage4.8.1 | 1 |
| lineage3.1.2.2 | 3 |
| lineage2.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.1.2 | 2 |
| lineage3.1.3 | 2 |
| lineage1.1 | 2 |
| lineage6 | 2 |
| lineage4.3.3;lineage4.1.2.1 | 1 |
| lineage1.1.3.2 | 2 |
| La3 | 2 |
| lineage4.1.4 | 1 |
| lineage4.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3.1.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4;lineage3 | 1 |
| lineage4 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 214 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9940989 | Sensitive | lineage4.9 | None | SRR8234778 | Other | La1.2.BCG | None | ERR023755 | Sensitive | lineage4.3.2 | None | SRR9940993 | Sensitive | lineage4.9 | None | ERR046804 | Sensitive | lineage3 | None | ERR023749 | Sensitive | lineage3 | None | ERR046829 | Sensitive | lineage3 | None | ERR046815 | Sensitive | lineage3.1.2 | None | ERR046828 | Sensitive | lineage3 | None | ERR046899 | Sensitive | lineage4.8 | None | ERR046835 | Sensitive | lineage4.4.1.1 | None | ERR046902 | Sensitive | lineage4.1.1.3 | None | ERR4407520 | Sensitive | lineage4.8 | None | ERR046909 | Sensitive | lineage4.9 | None | ERR10430713 | Sensitive | La2 | None | ERR10430720 | Sensitive | La2 | None | ERR376096 | Sensitive | lineage4.9 | None | ERR4407470 | HR-TB | lineage4.6.2.2 | None | ERR779665 | Sensitive | lineage4.3.4.2.1 | None | ERR4407543 | Sensitive | lineage2.2.1 | None | ERR779664 | Sensitive | lineage1.2.2.1 | None | ERR779668 | Sensitive | lineage4.1.2 | None | ERR779661 | Sensitive | lineage4.3.4.2.1 | None | ERR779663 | HR-TB | lineage4.3.4.2.1 | None | ERR9117848 | Sensitive | lineage3.1.2 | None | ERR779674 | Sensitive | lineage4.3.4.2.1 | None | ERR779677 | Sensitive | lineage4.3.4.2.1 | None | ERR9117723 | Other | lineage4.1.1.3.1 | None | ERR9117772 | Sensitive | lineage4.4.1.2 | None | ERR779673 | Sensitive | lineage4.1.2 | None | ERR779679 | MDR-TB | lineage1.2.2.2 | None | ERR9125012 | Sensitive | lineage3 | None | ERR9124929 | RR-TB | lineage4.8 | None | ERR9124991 | Sensitive | lineage4.4.2 | None | SRR10993955 | Other | La1.6 | None | ERR9125146 | Sensitive | lineage3 | None | ERR9125356 | Sensitive | lineage1.2.1.2.1 | None | ERR9125366 | Sensitive | lineage4.6.1.1 | None | ERR9125367 | Sensitive | lineage4.6.1.1 | None | ERR9786307 | Sensitive | lineage4.1.3;lineage4.1.1.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | ERR9125301 | MDR-TB | lineage1.2.1.2.1 | None | ERR9891994 | Other | La1.2 | None | SRR16058292 | MDR-TB | lineage1.2.1.2.1 | None | SRR16058107 | Sensitive | lineage3 | None | SRR11462893 | Other | La1.8.1 | None | SRR1573706 | Sensitive | lineage4.4.2 | None | SRR16058030 | Sensitive | lineage1.2.1.2.1 | None | SRR16058095 | Sensitive | lineage3 | None | SRR16058516 | Sensitive | lineage4.6.1.1 | None | SRR16058379 | RR-TB | lineage4.8 | None | SRR16058515 | Sensitive | lineage4.6.1.1 | None | SRR1791712 | Other | La1.3 | None | SRR1792499 | Other | La1.7.1 | None | SRR1792242 | Other | La1.8.1 | None | SRR1792414 | Other | La1.8.1 | None | SRR1792055 | Other | La1.8.1 | None | SRR6207286 | Sensitive | lineage2.2.1.1 | None | SRR18213688 | Sensitive | lineage4.8.2 | None | SRR21658636 | Sensitive | lineage4.3.3 | None | ERR11243483 | Sensitive | lineage4.8 | None | SRR21031686 | MDR-TB | lineage2.2.1 | None | SRR18213739 | Sensitive | lineage4.3.1.1 | None | SRR19976648 | Sensitive | lineage4.9 | None | SRR2101435 | Sensitive | lineage4.1.2.1 | None | SRR2101472 | Sensitive | lineage4.3.2.1 | None | SRR2101605 | Sensitive | lineage2.2.1 | None | SRR6207281 | Pre-XDR-TB | lineage2.2 | None | SRR6207287 | Sensitive | lineage4.1.1.3 | None | SRR6650350 | Other | lineage3 | None | SRR6650303 | Other | lineage2.2.1 | None | SRR6650243 | Sensitive | lineage4.1.1 | None | SRR6650379 | Sensitive | lineage4.5 | None | SRR6650390 | Sensitive | lineage4;lineage1.2.2.1 | None | SRR6797635 | Other | lineage2.2.1 | None | SRR6650117 | Sensitive | lineage4.4.1.2 | None | SRR6797458 | MDR-TB | lineage1.1.3.1 | None | SRR6650175 | Sensitive | lineage1.2.2.2 | None | SRR6650127 | Sensitive | None | SRR6650235 | Other | lineage3 | None | SRR6650182 | Sensitive | lineage1 | None | SRR6650319 | Sensitive | lineage1.1.3.1 | None | SRR6650285 | Sensitive | lineage4.8 | None | SRR6650283 | Sensitive | lineage3 | None | SRR6650404 | Sensitive | lineage2.2.1 | None | SRR6650392 | Sensitive | lineage2.2.1 | None | SRR6650391 | Sensitive | lineage1.1.3.1 | None | SRR6650210 | Sensitive | lineage1.1.3.1 | None | SRR6650161 | Other | lineage1.1.3 | None | SRR6797416 | Sensitive | lineage2.2 | None | SRR6797610 | Sensitive | lineage4.5 | None | SRR6650106 | Other | lineage3 | None | SRR6650227 | Sensitive | lineage1.1.3.1 | None | SRR6650401 | Sensitive | lineage1.2.2.2 | None | SRR6650299 | Other | lineage1.1.3.1 | None | SRR6797679 | Sensitive | lineage4.1.1.3 | None | SRR3105784 | Pre-XDR-TB | lineage2.2.1 | None | SRR6797685 | Sensitive | lineage4.1.1 | None | ERR1465726 | Other | lineage4.1.2 | None | SRR6797691 | Sensitive | lineage1.2.2.2 | None | ERR4815242 | Sensitive | lineage3 | None | SRR3675272 | HR-TB | lineage3 | None | ERR4814531 | MDR-TB | lineage3.1.2 | None | ERR4815484 | Sensitive | lineage4.6.2.2 | None | ERR4814512 | Other | lineage2.2.1 | None | ERR1679640 | Sensitive | lineage4.6.2.2 | None | ERR1679655 | Sensitive | lineage4.6.2.2 | None | ERR4815079 | RR-TB | lineage3 | None | SRR3675277 | Sensitive | lineage4.1.1.3 | None | ERR4815541 | Sensitive | lineage4.9 | None | ERR4815080 | Other | lineage4.1.2.1 | None | ERR841400 | Other | lineage4.8 | None | ERR4815847 | Sensitive | lineage3 | None | ERR2027250 | Other | lineage3.1.2 | None | SRR3732710 | Sensitive | lineage4.3.2 | None | ERR4817476 | Sensitive | lineage4.1.2.1 | None | ERR4816424 | Sensitive | lineage4.9 | None | SRR3732680 | Other | lineage4.8 | None | SRR1723693_SRR1723694 | RR-TB | lineage2.2.1.1 | None | SRR4033290 | Sensitive | lineage4.8.1 | None | ERR4817423 | Sensitive | lineage4.8 | None | SRR4034204 | HR-TB | lineage4.3.2.1 | None | ERR498299 | Sensitive | lineage4.1.2.1 | None | ERR4816837 | Sensitive | lineage4.9 | None | ERR4816825 | Sensitive | lineage3.1.2.2 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4816877 | Sensitive | lineage4.9 | None | ERR4816902 | Sensitive | lineage4.9 | None | ERR2513581 | Sensitive | lineage1.1.1.1 | None | ERR4816933 | Other | lineage4.1.1.3 | None | ERR4817754 | Sensitive | lineage4.9 | None | ERR2513092 | Sensitive | lineage1.1.3 | None | ERR234127 | Sensitive | lineage2.2.1 | None | ERR234139 | Sensitive | lineage2.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2503380 | Sensitive | lineage4.4.1.1 | None | ERR4818403 | RR-TB | lineage4.1.2.1 | None | ERR2512766 | Other | lineage3.1.3 | None | ERR2513682 | Sensitive | lineage3 | None | ERR4818962 | Sensitive | lineage1.1 | None | ERR023754 | Sensitive | lineage4.1.2.1 | None | ERR4818574 | Other | lineage6 | None | ERR4819527 | Sensitive | lineage4.9 | None | ERR4819356 | RR-TB | lineage4.3.3;lineage4.1.2.1 | None | ERR4819600 | Sensitive | lineage4.9 | None | ERR4820407 | Sensitive | lineage4.9 | None | ERR4819896 | Sensitive | lineage3 | None | ERR4819842 | Other | lineage4.1.2.1 | None | ERR4819688 | Sensitive | lineage6 | None | ERR4819867 | Other | lineage1.1.3.2 | None | ERR2514767 | Sensitive | lineage4.8 | None | ERR2515022 | Sensitive | lineage3 | None | ERR4820192 | Other | La3 | None | ERR4820685 | Sensitive | lineage4.9 | None | ERR4821955 | Pre-XDR-TB | lineage3 | None | SRR6045502 | Sensitive | lineage4.1.4 | None | SRR6046113 | Other | lineage4.1.1.3 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822090 | Sensitive | lineage4.9 | None | ERR4821548 | Other | lineage3 | None | SRR6046115 | Sensitive | lineage3 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6045860 | Sensitive | lineage4.1.1.2 | None | SRR6045894 | Other | lineage4.8 | None | SRR6044871 | Sensitive | lineage3 | None | SRR6045925 | Other | lineage4.2 | None | SRR6044916 | Other | lineage4.1.1 | None | SRR6045932 | MDR-TB | lineage4.2.2.2 | None | SRR6044993 | Other | lineage3 | None | SRR6045033 | HR-TB | None | SRR6045022 | Other | lineage3.1.1 | None | SRR6045018 | Sensitive | lineage4.3.4.2 | None | SRR6045036 | Other | lineage4;lineage3 | None | SRR6045058 | HR-TB | lineage4.3.3 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR6046193 | Sensitive | lineage3.1.2.2 | None | SRR6045068 | Other | La1.2 | None | SRR6045110 | Other | lineage3 | None | SRR6045064 | Other | lineage4.3.1.1 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR6046037 | Pre-XDR-TB | None | SRR6045331 | HR-TB | lineage3.1.2 | None | SRR6045230 | HR-TB | None | SRR6045308 | Other | lineage3.1.2.2 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6046208 | Other | lineage4 | None | SRR6046607 | Other | lineage3 | None | SRR6045407 | Other | La1.8.1 | None | SRR6046334 | Sensitive | La3 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6046481 | Other | lineage4.1.1.3.1 | None | SRR6046774 | Sensitive | lineage1.1.3.2 | None | SRR6046627 | Sensitive | lineage4.3.3 | None | SRR6046874 | Other | lineage4.5 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR611423 | HR-TB | lineage2.2.1 | None | SRR6982140 | Other | lineage2.2 | None | ERR3077961 | MDR-TB | lineage4.3.3 | None | ERR4831945 | HR-TB | lineage4.5 | None | SRR6982112 | Sensitive | lineage4.1.2.1 | None | SRR6650204 | Sensitive | lineage1.1.3.1 | None | ERR3077957 | MDR-TB | lineage4.3.4.2.1 | None | SRR6797297 | Sensitive | lineage2.2.1 | None | SRR6832049 | Sensitive | lineage4.2.1 | None | SRR6797439 | Sensitive | lineage1.1 | None | SRR6981902 | Sensitive | lineage4.3.2.1 | None |
|---|
