Rv0486 - c.-39C>G
Drug resistance types
119 Sensitive
0 RR-TB
1 HR-TB
3 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.1 | 1 |
| lineage3 | 12 |
| lineage3.1.2 | 9 |
| lineage4.8 | 5 |
| lineage1.1.2 | 11 |
| lineage2.2.1 | 8 |
| lineage7 | 22 |
| lineage2.2.1.1 | 1 |
| lineage6.1.1 | 1 |
| lineage4.3.3 | 2 |
| lineage6 | 1 |
| lineage6.2.2;lineage4 | 1 |
| lineage1.2.2.1 | 4 |
| lineage1.2.2.2 | 4 |
| lineage3.1.1 | 14 |
| lineage1.1.3.2 | 8 |
| lineage4.9.1 | 4 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2.1 | 8 |
| lineage4.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1.2.1 | 2 |
| La1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.6.3 | 1 |
| lineage4.6 | 1 |
| lineage4.1.1 | 5 |
| lineage4.1.1.3.1 | 8 |
| lineage4.8.2 | 3 |
| lineage4.8.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 144 |
Geographic prevalence
Country level data for this variant is available for 109 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1792495 | Other | La1.7.1 | None | SRR2100075 | Sensitive | lineage3 | None | SRR2100080 | Sensitive | lineage3.1.2 | None | SRR2100076 | Sensitive | lineage3.1.2 | None | SRR2100073 | Sensitive | lineage4.8 | None | SRR2100077 | Sensitive | lineage3 | None | SRR2100083 | Sensitive | lineage3 | None | SRR2100086 | Other | lineage3.1.2 | None | SRR2100085 | Sensitive | lineage3.1.2 | None | SRR2100092 | Sensitive | lineage1.1.2 | None | ERR181440 | Sensitive | lineage2.2.1 | dj | ERR233355 | Sensitive | lineage7 | None | ERR1200618 | Sensitive | lineage7 | None | ERR1200639 | Sensitive | lineage7 | et | ERR233361 | Sensitive | lineage2.2.1.1 | None | ERR233362 | Sensitive | lineage6.1.1 | sn | ERR1200603 | Sensitive | lineage7 | None | ERR1193641 | Sensitive | lineage4.3.3 | et | SAMN03246243 | MDR-TB | lineage2.2.1 | cn | ERR841397 | Sensitive | lineage4.8 | rs | ERR233368 | Sensitive | lineage6 | None | ERR233367 | Sensitive | lineage6.2.2;lineage4 | None | ERR1200609 | Sensitive | lineage3 | et | ERR233346 | Sensitive | lineage7 | None | ERR233353 | Sensitive | lineage1.2.2.1 | et | ERR1200629 | Sensitive | lineage1.2.2.1 | et | ERR1200613 | Sensitive | lineage7 | et | ERR233364 | Other | lineage1.2.2.2 | cn | ERR234128 | Sensitive | lineage2.2.1 | cn | ERR1200630 | Sensitive | lineage3.1.1 | et | ERR245656 | Sensitive | lineage1.1.3.2 | mw | ERR245650 | Sensitive | lineage4.9.1 | mw | ERR245647 | Sensitive | lineage1.1.3.2 | mw | ERR1200605 | Other | lineage4.2.1 | et | ERR245668 | Sensitive | lineage3.1.1 | mw | ERR245674 | Sensitive | lineage1.1.3.2 | mw | ERR245682 | Other | lineage3 | mw | ERR245681 | Sensitive | lineage4.3.4.2.1 | mw | ERR245679 | Sensitive | lineage1.1.3.2 | mw | ERR245677 | Sensitive | lineage1.1.3.2 | mw | ERR245684 | Sensitive | lineage3.1.1 | mw | ERR245698 | Sensitive | lineage1.1.2 | mw | ERR245689 | Sensitive | lineage3.1.1 | mw | ERR245691 | Sensitive | lineage1.1.2 | mw | ERR245696 | Sensitive | lineage2.2.1 | mw | ERR245694 | Sensitive | lineage3.1.1 | mw | ERR245700 | Sensitive | lineage4.3.4.2.1 | mw | ERR245714 | Sensitive | lineage4.9.1 | mw | ERR245701 | Other | lineage4.8 | mw | ERR245704 | Sensitive | lineage3.1.1 | mw | ERR245710 | Sensitive | lineage2.2.1 | mw | ERR245702 | Sensitive | lineage3.1.1 | mw | ERR245711 | Other | lineage4.1.2 | mw | ERR245707 | Sensitive | lineage4.3.4.2.1 | mw | ERR245713 | Sensitive | lineage3.1.1 | mw | ERR245715 | Sensitive | lineage3.1.1 | mw | ERR245709 | Other | lineage4.3.4.2.1 | mw | ERR245712 | Sensitive | lineage4.9.1 | mw | ERR245735 | Sensitive | lineage2.2.1 | mw | ERR245721 | Sensitive | lineage1.1.3.2 | mw | ERR245719 | Sensitive | lineage4.9.1 | mw | ERR245720 | Sensitive | lineage1.1.3.2 | mw | ERR245737 | Sensitive | lineage4.3.4.2.1 | mw | ERR245730 | Sensitive | lineage4.3.4.2.1 | mw | ERR245781 | Sensitive | lineage1.1.3.2 | mw | ERR245848 | Sensitive | lineage4.3.4.2.1 | mw | ERR245815 | Sensitive | lineage4.3.4.2.1 | None | ERR1200636 | Other | lineage7 | et | ERR1200608 | Sensitive | lineage7 | et | ERR1200635 | Sensitive | lineage7 | et | ERR1200606 | Sensitive | lineage7 | et | ERR233354 | Sensitive | lineage7 | None | ERR233359 | Sensitive | lineage2.2.2 | kr | ERR1200602 | Sensitive | lineage7 | et | ERR1200625 | Sensitive | lineage7 | et | ERR233351 | Sensitive | lineage1.1.2 | et | ERR233360 | Sensitive | lineage3 | None | ERR1200610 | Sensitive | lineage7 | et | ERR1200634 | Sensitive | lineage7 | et | ERR1200604 | Sensitive | lineage7 | et | ERR233352 | Sensitive | lineage4.1.2.1 | None | ERR1200622 | Other | La1.3 | et | ERR1200623 | Sensitive | lineage7 | et | ERR1200632 | Sensitive | lineage1.1.3.1 | et | ERR1200628 | Sensitive | lineage4.1.2.1 | None | ERR1200624 | Sensitive | lineage7 | et | ERR1200617 | Other | lineage7 | et | ERR1200627 | Sensitive | lineage4.3.3 | et | ERR1200633 | Sensitive | lineage7 | et | ERR233370 | Other | lineage2.2.1 | None | SRR611416 | Pre-XDR-TB | lineage2.2.1 | None | ERR1200640 | Sensitive | lineage7 | et | ERR1200626 | Sensitive | lineage1.1.2 | et | ERR1200611 | Other | lineage4.6.3 | et | ERR1200619 | Sensitive | lineage7 | et | ERR1200621 | Sensitive | lineage4.6 | et | ERR233347 | Sensitive | lineage3 | None | ERR046743 | Sensitive | lineage4.1.1 | gb | ERR046733 | Sensitive | lineage4.1.1 | gb | ERR046745 | Sensitive | lineage4.1.1 | gb | ERR046737 | Sensitive | lineage4.1.1 | gb | ERR046785 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046751 | Sensitive | lineage4.8.2 | gb | ERR046757 | Sensitive | lineage4.8 | None | ERR046778 | HR-TB | lineage4.8.1 | gb | ERR046786 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046787 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046781 | Sensitive | lineage4.4.1.2 | gb | ERR046796 | Pre-XDR-TB | lineage4.8 | gb | ERR046802 | Sensitive | lineage3.1.2 | None | ERR046801 | Sensitive | lineage3 | None | ERR046813 | Sensitive | lineage3 | None | ERR046810 | Sensitive | lineage3.1.2 | None | ERR046803 | Sensitive | lineage3 | None | ERR046816 | Other | lineage3.1.2 | None | ERR046823 | Sensitive | lineage1.2.2.2 | gb | ERR046815 | Sensitive | lineage3.1.2 | None | ERR046822 | Sensitive | lineage4.1.1.3.1 | gb | ERR046830 | Sensitive | lineage3.1.2 | None | ERR046845 | Sensitive | lineage3.1.1 | gb | ERR046848 | Sensitive | lineage1.2.2.1 | gb | ERR046832 | Sensitive | lineage1.1.2 | gb | ERR046842 | Sensitive | lineage4.1.1 | gb | ERR046851 | Sensitive | lineage4.1.1.3.1 | gb | ERR046843 | Sensitive | lineage4.1.1.3.1 | gb | ERR046867 | Sensitive | lineage3.1.1 | gb | ERR046861 | Sensitive | lineage3.1.1 | gb | ERR046850 | Sensitive | lineage1.2.2.2 | gb | ERR046855 | MDR-TB | lineage1.1.2 | gb | ERR046856 | MDR-TB | lineage1.1.2 | gb | ERR046878 | Sensitive | lineage4.8.2 | gb | ERR046869 | Sensitive | lineage4.1.1.3 | gb | ERR046880 | Sensitive | lineage1.2.2.2 | gb | ERR046866 | Sensitive | lineage3.1.1 | gb | ERR046883 | Sensitive | lineage3 | gb | ERR046896 | Sensitive | lineage1.1.2 | None | ERR046893 | Other | lineage1.2.2.1 | gb | ERR046913 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046895 | Sensitive | lineage3 | gb | ERR046900 | Sensitive | lineage1.1.2 | gb | ERR046907 | Sensitive | lineage1.1.2 | gb | ERR046904 | Sensitive | lineage4.1.1.3.1 | gb | ERR046914 | Sensitive | lineage3.1.1 | gb | ERR046920 | Sensitive | lineage4.8.2 | gb |
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