Rv0486 - c.-486T>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
4 HR-TB
214 MDR-TB
23 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 236 |
| lineage4.3.2;lineage4.3.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.3.3;lineage4.3.4.1 | 2 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 242 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28393764 | MDR-TB | lineage4.3.3 | None | SRR28393366 | MDR-TB | lineage4.3.3 | None | SRR28393431 | MDR-TB | lineage4.3.3 | None | ERR2516628 | Pre-XDR-TB | lineage4.3.3 | None | ERR2510194 | MDR-TB | lineage4.3.3 | pe | ERR2510153 | MDR-TB | lineage4.3.3 | pe | ERR2510232 | MDR-TB | lineage4.3.3 | pe | ERR1034748 | MDR-TB | lineage4.3.3 | pe | ERR1034750 | MDR-TB | lineage4.3.3 | pe | ERR13260639 | MDR-TB | lineage4.3.3 | None | SRR28394183 | MDR-TB | lineage4.3.3 | None | ERR12117970 | Pre-XDR-TB | lineage4.3.3 | None | SRR10808671 | MDR-TB | lineage4.3.3 | None | ERR13261675 | MDR-TB | lineage4.3.3 | None | SRR16370478 | MDR-TB | lineage4.3.3 | None | ERR6866131 | MDR-TB | lineage4.3.3 | None | SRR29081653 | MDR-TB | lineage4.3.3 | None | ERR13261877 | MDR-TB | lineage4.3.3 | None | ERR13260195 | MDR-TB | lineage4.3.3 | None | ERR13260428 | MDR-TB | lineage4.3.3 | None | ERR13267441 | MDR-TB | lineage4.3.3 | None | ERR13261904 | MDR-TB | lineage4.3.3 | None | ERR13260212 | MDR-TB | lineage4.3.3 | None | ERR9029849 | MDR-TB | lineage4.3.3 | None | ERR2516527 | Pre-XDR-TB | lineage4.3.3 | None | ERR13260176 | MDR-TB | lineage4.3.3 | None | ERR13261892 | MDR-TB | lineage4.3.3 | None | ERR13260636 | MDR-TB | lineage4.3.3 | None | ERR13260529 | MDR-TB | lineage4.3.3 | None | ERR12117983 | MDR-TB | lineage4.3.3 | None | ERR13261579 | MDR-TB | lineage4.3.3 | None | ERR13261915 | MDR-TB | lineage4.3.3 | None | ERR7910859 | MDR-TB | lineage4.3.3 | None | ERR3287803 | MDR-TB | lineage4.3.3 | None | ERR13260230 | MDR-TB | lineage4.3.3 | None | ERR13260693 | Pre-XDR-TB | lineage4.3.3 | None | ERR4025035 | MDR-TB | lineage4.3.3 | None | SAMEA5569996 | MDR-TB | lineage4.3.2;lineage4.3.3 | None | ERR6865695 | HR-TB | lineage4.3.3 | None | ERR13260131 | MDR-TB | lineage4.3.3 | None | ERR13260203 | MDR-TB | lineage4.3.3 | None | ERR13260219 | MDR-TB | lineage4.3.3 | None | ERR6866277 | MDR-TB | lineage4.3.3 | None | ERR13261925 | MDR-TB | lineage4.3.3 | None | ERR13260702 | MDR-TB | lineage4.3.3 | None | ERR7911012 | MDR-TB | lineage4.3.3 | None | ERR3287634 | MDR-TB | lineage4.3.3 | None | ERR9029854 | Pre-XDR-TB | lineage4.3.3 | None | ERR13260193 | MDR-TB | lineage4.3.3 | None | ERR13260208 | MDR-TB | lineage4.3.3 | None | ERR9029855 | MDR-TB | lineage4.3.3 | None | ERR7911009 | MDR-TB | lineage4.3.3 | None | ERR13260652 | MDR-TB | lineage4.3.3 | None | SRR29748787 | MDR-TB | lineage4.3.3 | None | ERR13260211 | MDR-TB | lineage4.3.3 | None | ERR13261648 | MDR-TB | lineage4.3.3 | None | ERR4813563 | MDR-TB | lineage4.3.3 | None | ERR4813642 | MDR-TB | lineage4.3.3 | None | ERR4813703 | MDR-TB | lineage4.3.3 | None | SRR3732570 | MDR-TB | lineage4.3.3 | None | SRR28393563 | MDR-TB | lineage4.3.3 | None | SRR28393909 | MDR-TB | lineage4.3.3 | None | ERR13260213 | MDR-TB | lineage4.3.3 | None | ERR13260123 | MDR-TB | lineage4.3.3 | None | ERR13260682 | MDR-TB | lineage4.3.3 | None | ERR13260227 | MDR-TB | lineage4.3.3 | None | ERR3287747 | MDR-TB | lineage4.3.3 | pe | ERR4812776 | MDR-TB | lineage4.3.3 | pe | ERR3287818 | MDR-TB | lineage4.3.3 | pe | ERR7910880 | MDR-TB | lineage4.3.3 | pe | ERR7911367 | MDR-TB | lineage4.3.3 | pe | ERR7911376 | MDR-TB | lineage4.3.3 | pe | ERR6865324 | Pre-XDR-TB | lineage4.3.3 | None | ERR751543 | MDR-TB | lineage4.3.3 | pe | ERR751629 | MDR-TB | lineage4.3.3 | pe | ERR751509 | MDR-TB | lineage4.3.3 | pe | ERR4812805 | MDR-TB | lineage4.3.3 | None | ERR4812847 | MDR-TB | lineage4.3.3 | None | ERR779890 | MDR-TB | lineage4.3.3 | pe | ERR751548 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4812964 | MDR-TB | lineage4.3.3 | pe | ERR4813053 | MDR-TB | lineage4.3.3 | None | ERR751436 | MDR-TB | lineage4.3.3 | pe | ERR751365 | MDR-TB | lineage4.3.3 | pe | ERR4813364 | MDR-TB | lineage4.3.3 | pe | ERR12118056 | Pre-XDR-TB | lineage4.3.3 | None | ERR13260617 | MDR-TB | lineage4.3.3 | None | ERR1034703 | MDR-TB | lineage4.3.3 | pe | ERR7910860 | MDR-TB | lineage4.3.3 | None | ERR13260135 | MDR-TB | lineage4.3.3 | None | SRR28393676 | MDR-TB | lineage4.3.3 | None | SRR7517834 | MDR-TB | lineage4.3.3 | pe | SRR22461695 | MDR-TB | lineage4.3.3 | None | ERR6879047 | MDR-TB | lineage4.3.3 | None | SRR28394300 | MDR-TB | lineage4.3.3 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR6879035 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | None | ERR4813623 | MDR-TB | lineage4.3.3 | None | SRR28393364 | XDR-TB | lineage4.3.3 | None | ERR13260574 | MDR-TB | lineage4.3.3 | None | ERR13261923 | MDR-TB | lineage4.3.3 | None | ERR13260188 | MDR-TB | lineage4.3.3 | None | ERR13260697 | MDR-TB | lineage4.3.3 | None | SRR29126491 | MDR-TB | lineage4.3.3 | None | ERR13261600 | MDR-TB | lineage4.3.3 | None | SRR28393473 | MDR-TB | lineage4.3.3 | None | ERR13260168 | MDR-TB | lineage4.3.3 | None | ERR13261914 | MDR-TB | lineage4.3.3 | None | ERR13261880 | MDR-TB | lineage4.3.3 | None | ERR13260534 | MDR-TB | lineage4.3.3 | None | ERR13260223 | MDR-TB | lineage4.3.3 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR13260117 | MDR-TB | lineage4.3.3 | None | ERR13260192 | MDR-TB | lineage4.3.3 | None | ERR13260181 | MDR-TB | lineage4.3.3 | None | ERR13260194 | MDR-TB | lineage4.3.3 | None | ERR13261939 | MDR-TB | lineage4.3.3 | None | ERR13260224 | Pre-XDR-TB | lineage4.3.3 | None | SRR28394259 | MDR-TB | lineage4.3.3 | None | ERR6866164 | MDR-TB | lineage4.3.3 | None | ERR13260220 | MDR-TB | lineage4.3.3 | None | SRR17234904 | MDR-TB | lineage4.3.3 | None | ERR13260587 | MDR-TB | lineage4.3.3 | None | ERR4813686 | MDR-TB | lineage4.3.3 | None | ERR13260663 | Pre-XDR-TB | lineage4.3.3 | None | ERR13260128 | MDR-TB | lineage4.3.3 | None | ERR13261885 | MDR-TB | lineage4.3.3 | None | ERR13260237 | MDR-TB | lineage4.3.3 | None | ERR12118043 | MDR-TB | lineage4.3.3 | None | ERR4811979 | MDR-TB | lineage4.3.3 | pe | SRR28393917 | MDR-TB | lineage4.3.3 | None | ERR2184353 | MDR-TB | lineage4.3.3 | None | ERR3287685 | MDR-TB | lineage4.3.3 | pe | ERR3287725 | MDR-TB | lineage4.3.3 | pe | ERR3287872 | MDR-TB | lineage4.3.3 | pe | SRR28393462 | MDR-TB | lineage4.3.3 | None | SRR28394092 | MDR-TB | lineage4.3.3 | None | SRR28393367 | MDR-TB | lineage4.1.2.1;lineage4.3.3 | None | ERR4813536 | MDR-TB | lineage4.3.3 | None | ERR4829788 | MDR-TB | lineage4.3.3 | it | ERR751616 | MDR-TB | lineage4.3.3 | pe | ERR4812632 | MDR-TB | lineage4.3.3 | None | ERR4812749 | MDR-TB | lineage4.3.3 | pe | ERR4812877 | MDR-TB | lineage4.3.3 | None | ERR4812950 | MDR-TB | lineage4.3.3 | pe | ERR4813007 | MDR-TB | lineage4.3.3 | None | ERR4813019 | MDR-TB | lineage4.3.3 | None | ERR4813025 | MDR-TB | lineage4.3.3 | None | ERR4813031 | MDR-TB | lineage4.3.3 | None | ERR4811913 | MDR-TB | lineage4.3.3 | pe | ERR4813079 | MDR-TB | lineage4.3.3 | pe | ERR775338 | MDR-TB | lineage4.3.3 | pe | ERR751591 | Pre-XDR-TB | lineage4.3.3 | pe | ERR751609 | MDR-TB | lineage4.3.3 | pe | ERR2516490 | MDR-TB | lineage4.3.3 | pe | ERR2516668 | Pre-XDR-TB | lineage4.3.3 | pe | ERR2510238 | MDR-TB | lineage4.3.3 | pe | SRR28393412 | MDR-TB | lineage4.3.3 | None | SRR22461585 | MDR-TB | lineage4.3.3 | None | ERR13260438 | MDR-TB | lineage4.3.3 | None | ERR1034798 | MDR-TB | lineage4.3.3 | pe | ERR12117909 | MDR-TB | lineage4.3.3 | None | SRR28394216 | MDR-TB | lineage4.3.3 | None | ERR6865966 | HR-TB | lineage4.3.3 | None | ERR13260210 | MDR-TB | lineage4.3.3 | None | ERR4024886 | HR-TB | lineage4.3.3 | None | ERR13261922 | MDR-TB | lineage4.3.3 | None | ERR4813716 | MDR-TB | lineage4.3.3 | None | ERR6865602 | MDR-TB | lineage4.3.3 | None | SRR13870403 | Pre-XDR-TB | lineage4.3.3 | None | SAMEA5569803 | Pre-XDR-TB | lineage4.3.3 | None | SAMEA5569827 | MDR-TB | lineage4.3.3 | None | ERR10561954 | MDR-TB | lineage4.3.3 | None | ERR13261933 | MDR-TB | lineage4.3.3 | None | ERR13260414 | MDR-TB | lineage4.3.3 | None | ERR4178154 | HR-TB | lineage4.3.3 | None | ERR13261618 | MDR-TB | lineage4.3.3 | None | ERR13259982 | MDR-TB | lineage4.3.3 | None | ERR13260426 | MDR-TB | lineage4.3.3 | None | ERR3287610 | Pre-XDR-TB | lineage4.3.3 | None | ERR13260386 | MDR-TB | lineage4.3.3 | None | ERR13260182 | MDR-TB | lineage4.3.3 | None | ERR4813604 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813731 | MDR-TB | lineage4.3.3 | None | SRR22461610 | MDR-TB | lineage4.3.3 | None | ERR13260696 | MDR-TB | lineage4.3.3 | None | ERR6879033 | MDR-TB | lineage4.3.3 | None | ERR13261575 | MDR-TB | lineage4.3.3 | None | ERR13261936 | MDR-TB | lineage4.3.3 | None | ERR13260401 | MDR-TB | lineage4.3.3 | None | ERR13260229 | Pre-XDR-TB | lineage4.3.3 | None | ERR13260189 | MDR-TB | lineage4.3.3 | None | ERR13260153 | MDR-TB | lineage4.3.3 | None | ERR13260400 | MDR-TB | lineage4.3.3 | None | ERR13260161 | MDR-TB | lineage4.3.3 | None | SRR28393429 | MDR-TB | lineage4.3.3 | None | ERR1034757 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | pe | ERR13261901 | Pre-XDR-TB | lineage4.3.3 | None | ERR4024938 | Pre-XDR-TB | lineage4.3.3 | None | ERR6879034 | MDR-TB | lineage4.3.3 | None | ERR4813339 | MDR-TB | lineage4.3.3 | None | ERR3287363 | Pre-XDR-TB | lineage4.3.3 | pe | ERR3287732 | MDR-TB | lineage4.3.3 | pe | ERR3287749 | MDR-TB | lineage4.3.3 | pe | ERR12117934 | Pre-XDR-TB | lineage4.3.3 | None | ERR3287426 | MDR-TB | lineage4.3.3 | pe | SRR28393556 | MDR-TB | lineage4.3.3 | None | SRR28393968 | MDR-TB | lineage4.3.3 | None | SRR28393553 | MDR-TB | lineage4.3.3 | None | ERR3287691 | MDR-TB | lineage4.3.3 | pe | SRR28393843 | MDR-TB | lineage4.3.3 | None | ERR3287766 | MDR-TB | lineage4.3.3 | pe | ERR3287786 | MDR-TB | lineage4.3.3 | pe | SRR28393460 | MDR-TB | lineage4.3.3 | None | ERR3287813 | MDR-TB | lineage4.3.3 | pe | SRR28393767 | MDR-TB | lineage4.3.3 | None | SRR28393365 | Pre-XDR-TB | lineage4.3.3 | None | ERR3287854 | MDR-TB | lineage4.3.3 | pe | ERR3287374 | MDR-TB | lineage4.3.3 | pe | ERR3287470 | MDR-TB | lineage4.3.3 | pe | SRR28394120 | MDR-TB | lineage4.3.3 | None | SRR28393844 | MDR-TB | lineage4.3.3 | None | ERR4812806 | MDR-TB | lineage4.3.3 | pe | SRR28393969 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813082 | MDR-TB | lineage4.3.3 | pe | ERR775328 | MDR-TB | lineage4.3.3 | pe | ERR751571 | MDR-TB | lineage4.3.3 | pe | SRR28393904 | MDR-TB | lineage4.3.3 | None | SRR28393469 | MDR-TB | lineage4.3.3 | None | SRR28393943 | MDR-TB | lineage4.3.3 | None | SRR28393314 | MDR-TB | lineage4.3.3 | None | ERR751351 | MDR-TB | lineage4.3.3 | pe | ERR751437 | MDR-TB | lineage4.3.3 | pe | ERR751595 | MDR-TB | lineage4.3.3 | pe | ERR4812958 | MDR-TB | lineage4.3.3 | pe | ERR751416 | MDR-TB | lineage4.3.3 | pe | ERR4812993 | MDR-TB | lineage4.3.3 | None | ERR4812995 | MDR-TB | lineage4.3.3 | None | ERR775388 | MDR-TB | lineage4.3.3 | pe | ERR4813073 | MDR-TB | lineage4.3.3 | pe | ERR775358 | MDR-TB | lineage4.3.3 | pe | ERR4813342 | MDR-TB | lineage4.3.3 | pe |
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