lineage | Count |
---|---|
lineage4.1 | 2 |
lineage2.2.1 | 72 |
lineage4.8 | 26 |
lineage3 | 37 |
lineage1.1.2 | 10 |
La3 | 1 |
lineage2.2.1.2 | 2 |
lineage4.1.2 | 4 |
lineage2.2.1.1 | 4 |
lineage3.1.2 | 8 |
lineage1.2.2.2 | 9 |
1 | |
lineage4.3.3 | 9 |
lineage3.1 | 2 |
lineage4.2.2.2 | 4 |
lineage4.3.3;lineage2.2.1 | 1 |
lineage3.1.2.1 | 4 |
lineage4.3.4.2 | 2 |
lineage4.8.1 | 1 |
lineage1.2.1.2.1 | 2 |
lineage4.1.2.1 | 7 |
lineage4.9 | 1 |
lineage4.7 | 3 |
lineage4.8;lineage3.1 | 1 |
lineage4.1.1.1 | 1 |
lineage3;lineage1.1.3.1 | 1 |
La1.2 | 2 |
lineage2.2 | 29 |
lineage4.2.1 | 13 |
lineage4.2.1.1 | 3 |
lineage4 | 3 |
lineage4.4.1.2 | 1 |
lineage4.5 | 1 |
lineage3.1.2;lineage2.2.1.1 | 1 |
lineage4.4.2 | 1 |
spoligotype | Count |
---|---|
None | 269 |
ID | Drug resistance | Lineage | Country iso2 | ERR4829570 | Sensitive | lineage4.1 | it | ERR4796405 | Pre-XDR-TB | lineage2.2.1 | in | ERR2677403 | MDR-TB | lineage2.2.1 | de | ERR2229214 | Sensitive | lineage4.8 | dk | ERR4797031 | HR-TB | lineage3 | in | ERR4797092 | Sensitive | lineage1.1.2 | in | ERR4797099 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796515 | Sensitive | La3 | in | ERR4797160 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796749 | MDR-TB | lineage3 | in | ERR2229520 | Sensitive | lineage4.8 | dk | ERR4796977 | MDR-TB | lineage2.2.1.2 | in | ERR4822374 | Sensitive | lineage4.1.2 | kg | ERR4796348 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR7911412 | MDR-TB | lineage2.2.1 | us | ERR4797090 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797034 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796779 | Pre-XDR-TB | lineage3.1.2 | in | ERR4796731 | Sensitive | lineage1.2.2.2 | in | ERR4797076 | Sensitive | lineage3 | in | ERR4822632 | Sensitive | lineage4.8 | None | ERR4796617 | Sensitive | in | ERR4796704 | Other | lineage3 | in | ERR4796907 | MDR-TB | lineage4.3.3 | in | ERR4797062 | Sensitive | lineage3.1 | in | ERR4797094 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR4822387 | Pre-XDR-TB | lineage2.2.1 | kg | ERR4797032 | Sensitive | lineage3 | in | ERR4830092 | MDR-TB | lineage4.3.3;lineage2.2.1 | None | ERR4796895 | MDR-TB | lineage3 | in | ERR4796858 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR4797091 | Sensitive | lineage3 | in | ERR4829578 | Sensitive | lineage2.2.1 | it | ERR4796983 | Pre-XDR-TB | lineage2.2.1 | in | ERR2229287 | Sensitive | lineage4.8 | dk | ERR4822395 | MDR-TB | lineage2.2.1 | kg | ERR4796969 | Pre-XDR-TB | lineage4.8 | in | ERR4796862 | MDR-TB | lineage3.1.2.1 | in | ERR4830097 | HR-TB | lineage2.2.1 | None | ERR4797029 | Sensitive | lineage1.1.2 | in | ERR2229556 | Sensitive | lineage4.8 | None | ERR4797042 | MDR-TB | lineage3.1.2 | in | ERR4796927 | Pre-XDR-TB | lineage4.3.4.2 | in | ERR4796945 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796944 | Pre-XDR-TB | lineage2.2.1 | in | ERR2677469 | MDR-TB | lineage2.2.1 | de | ERR4797113 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797075 | HR-TB | lineage1.1.2 | in | ERR4796856 | Sensitive | lineage3 | in | ERR4796764 | Other | lineage3 | in | ERR7911432 | MDR-TB | lineage4.8.1 | za | ERR4796943 | Sensitive | lineage1.2.1.2.1 | in | ERR4796658 | Sensitive | lineage1.2.2.2 | in | ERR4797088 | Other | lineage3.1.2.1 | in | ERR4796675 | Sensitive | lineage3 | in | ERR4796683 | MDR-TB | lineage2.2.1 | in | ERR4797041 | Sensitive | lineage3 | in | ERR4797017 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR4797035 | Pre-XDR-TB | lineage4.8 | in | ERR4830034 | HR-TB | lineage2.2.1 | None | ERR4796650 | Sensitive | lineage3 | in | ERR4796726 | MDR-TB | lineage2.2.1 | in | ERR4796850 | Pre-XDR-TB | lineage2.2.1 | in | ERR2229079 | Other | lineage4.8 | dk | ERR4796853 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796791 | MDR-TB | lineage2.2.1 | in | ERR4796974 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796878 | MDR-TB | lineage3 | in | ERR4797107 | Pre-XDR-TB | lineage3 | in | ERR4797055 | Sensitive | lineage3 | in | ERR4797050 | MDR-TB | lineage1.1.2 | in | ERR4796865 | Sensitive | lineage1.1.2 | in | ERR4796951 | Pre-XDR-TB | lineage2.2.1 | in | ERR4829430 | Sensitive | lineage4.1.2.1 | None | ERR2229218 | Sensitive | lineage4.8 | dk | ERR4797057 | Sensitive | lineage3.1.2 | in | ERR4796948 | MDR-TB | lineage2.2.1 | in | ERR4797073 | Sensitive | lineage1.1.2 | in | ERR4796331 | HR-TB | lineage4.9 | in | ERR4796971 | Sensitive | lineage1.2.2.2 | in | ERR4796914 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796932 | Sensitive | lineage1.2.2.2 | in | ERR4797021 | Sensitive | lineage1.2.2.2 | in | ERR4797049 | Sensitive | lineage3 | in | ERR4831078 | Sensitive | lineage2.2.1 | np | ERR4797030 | Sensitive | lineage1.1.2 | in | ERR4797106 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797007 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797127 | Other | lineage4.8 | in | ERR4796634 | Other | lineage3.1.2 | in | ERR4797027 | MDR-TB | lineage1.1.2 | in | ERR4830070 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796882 | HR-TB | lineage3 | in | ERR4796697 | Pre-XDR-TB | lineage2.2.1 | in | ERR7911439 | RR-TB | lineage2.2.1 | za | ERR4797084 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797079 | Sensitive | lineage3.1.2 | in | ERR4796473 | MDR-TB | lineage3 | in | ERR4797006 | Sensitive | lineage3 | in | ERR4796937 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796966 | MDR-TB | lineage2.2.1 | in | ERR4830078 | Sensitive | lineage2.2.1 | None | ERR4796647 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796332 | Sensitive | lineage3 | in | ERR4796709 | HR-TB | lineage1.1.2 | in | ERR4796973 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796742 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796498 | Sensitive | lineage3 | in | ERR4822411 | Sensitive | lineage2.2.1 | ua | ERR4797158 | Pre-XDR-TB | lineage3.1.2 | in | ERR4796490 | HR-TB | lineage1.2.2.2 | in | ERR4831059 | Sensitive | lineage2.2.1 | np | ERR4796909 | Sensitive | lineage3 | in | ERR4829571 | Sensitive | lineage3 | it | ERR4797140 | Sensitive | lineage3 | in | ERR4831251 | Pre-XDR-TB | lineage2.2.1 | de | ERR2229073 | Sensitive | lineage4.8 | dk | ERR4797068 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797098 | Sensitive | lineage1.1.2 | in | ERR4830069 | Sensitive | lineage2.2.1 | None | ERR7911405 | MDR-TB | lineage2.2.1 | us | ERR4797105 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797048 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796900 | Sensitive | lineage3 | in | ERR7911427 | MDR-TB | lineage2.2.1 | us | ERR4797103 | Sensitive | lineage4.3.3 | in | ERR7911426 | MDR-TB | lineage2.2.1 | us | ERR4797059 | Pre-XDR-TB | lineage4.1.2 | in | ERR4796946 | MDR-TB | lineage4.8 | in | ERR4797046 | HR-TB | lineage1.2.2.2 | in | ERR4797159 | Sensitive | lineage3 | in | ERR4829619 | Sensitive | lineage4.8 | it | ERR4796625 | Sensitive | lineage2.2.1.1 | in | ERR4831067 | Sensitive | lineage3 | np | ERR4796725 | MDR-TB | lineage1.2.2.2 | in | ERR4796912 | Pre-XDR-TB | lineage2.2.1 | in | ERR7911408 | Pre-XDR-TB | lineage2.2.1 | us | ERR4796992 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796950 | Pre-XDR-TB | lineage2.2.1 | in | ERR7911410 | MDR-TB | lineage2.2.1 | us | ERR4797109 | Sensitive | lineage3 | in | ERR4796879 | MDR-TB | lineage2.2.1 | in | ERR4796947 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830167 | MDR-TB | lineage2.2.1 | None | ERR4796873 | Sensitive | lineage3.1.2 | in | ERR4797044 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797039 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796991 | Sensitive | lineage4.7 | in | ERR4797126 | Other | lineage3 | in | ERR4829620 | Sensitive | lineage4.8 | it | ERR4796952 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796934 | Sensitive | lineage4.3.3 | in | ERR4796870 | Sensitive | lineage3 | in | ERR4796690 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796340 | Sensitive | lineage4.8 | in | ERR4796860 | Sensitive | lineage3 | in | ERR4829817 | Sensitive | lineage4.3.3 | it | ERR4796669 | HR-TB | lineage4.8;lineage3.1 | in | ERR4797033 | Sensitive | lineage4.1.1.1 | in | ERR4797011 | Sensitive | lineage3;lineage1.1.3.1 | in | ERR4829573 | Sensitive | lineage4.7 | it | ERR4829487 | RR-TB | lineage4.7 | it | ERR4797036 | Sensitive | lineage1.2.1.2.1 | in | ERR10796643 | Other | lineage4.3.4.2 | None | ERR10969244 | Sensitive | lineage4.8 | None | ERR10969228 | HR-TB | lineage4.1.2.1 | None | ERR10969249 | Sensitive | lineage4.1.2.1 | None | ERR10969181 | Sensitive | lineage4.1.2.1 | None | ERR7910959 | RR-TB | lineage4.1.2.1 | None | ERR10969262 | Sensitive | lineage4.8 | None | ERR6210130 | Other | La1.2 | None | SRR16088064 | MDR-TB | lineage2.2 | None | SRR16088140 | Sensitive | lineage2.2 | None | SRR16088101 | Sensitive | lineage4.1.2.1 | None | SRR16088129 | HR-TB | lineage4.3.3 | None | SRR16088221 | Other | lineage2.2 | None | SRR16088142 | HR-TB | lineage4.2.1 | None | SRR16088127 | Other | lineage4.2.1 | None | SRR16088148 | Other | lineage4.8 | None | SRR16088147 | Sensitive | lineage2.2 | None | SRR16088226 | HR-TB | lineage4.8 | None | SRR16088144 | Sensitive | lineage2.2 | None | SRR16088224 | Sensitive | lineage2.2 | None | SRR16088225 | HR-TB | lineage2.2 | None | SRR16088232 | HR-TB | lineage2.2 | None | SRR16088228 | Other | lineage4.8 | None | SRR16088238 | Sensitive | lineage4.2.1 | None | SRR16088235 | HR-TB | lineage2.2 | None | SRR16088236 | Sensitive | lineage4.8 | None | SRR16088233 | RR-TB | lineage4.2.1.1 | None | SRR16088239 | Sensitive | lineage4 | None | SRR16088256 | Sensitive | lineage4.1.2 | None | SRR16088246 | Sensitive | lineage4.1.2 | None | SRR16088248 | Sensitive | lineage4.2.1.1 | None | SRR16088258 | Sensitive | lineage4.8 | None | SRR16088255 | Sensitive | lineage4 | None | SRR16088266 | MDR-TB | lineage2.2 | None | SRR16088245 | Sensitive | lineage4.8 | None | SRR16088321 | Sensitive | lineage4.3.3 | None | SRR16088247 | Sensitive | lineage4.2.1.1 | None | SRR16088265 | Sensitive | lineage4 | None | SRR16088361 | MDR-TB | lineage2.2 | None | SRR16088436 | HR-TB | lineage2.2 | None | SRR16088439 | Sensitive | lineage4.8 | None | SRR16088438 | Sensitive | lineage2.2 | None | SRR16088437 | Other | lineage2.2 | None | SRR16088452 | Other | lineage2.2 | None | SRR16088441 | Sensitive | lineage4.8 | None | SRR16088448 | HR-TB | lineage2.2 | None | SRR16088442 | Sensitive | lineage4.2.1 | None | SRR16088445 | Other | lineage2.2 | None | SRR16088453 | Sensitive | lineage4.1.2.1 | None | SRR23086729 | Pre-XDR-TB | lineage4.8 | None | SRR16088539 | Sensitive | lineage2.2 | None | SRR19304122 | Sensitive | lineage4.2.2.2 | None | SRR23310867 | MDR-TB | lineage2.2 | None | SRR23310845 | MDR-TB | lineage2.2 | None | SRR23310825 | MDR-TB | lineage2.2 | None | SRR23310940 | MDR-TB | lineage4.2.1 | None | SRR23310885 | MDR-TB | lineage2.2 | None | SRR23310930 | Pre-XDR-TB | lineage4.2.1 | None | SRR23310939 | Pre-XDR-TB | lineage4.3.3 | None | SRR23310904 | MDR-TB | lineage4.2.1 | None | SRR23310925 | MDR-TB | lineage4.2.1 | None | SRR23310927 | Pre-XDR-TB | lineage2.2 | None | SRR23310941 | MDR-TB | lineage2.2 | None | SRR23310961 | Sensitive | lineage4.1 | None | SRR23310946 | Sensitive | lineage2.2 | None | SRR23311002 | MDR-TB | lineage4.2.1 | None | SRR23310989 | MDR-TB | lineage2.2 | None | SRR23310999 | MDR-TB | lineage4.2.1 | None | SRR23311011 | Pre-XDR-TB | lineage4.2.1 | None | SRR23311022 | MDR-TB | lineage2.2 | None | SRR23311012 | MDR-TB | lineage4.2.1 | None | SRR23311062 | MDR-TB | lineage4.2.1 | None | SRR23311027 | MDR-TB | lineage2.2 | None | SRR23311028 | Sensitive | lineage2.2 | None | ERR4796802 | MDR-TB | lineage2.2.1 | in | ERR4797022 | Sensitive | lineage3 | in | ERR4796892 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797086 | Other | lineage4.4.1.2 | in | ERR4796330 | Sensitive | lineage3 | in | ERR4830019 | Sensitive | lineage4.5 | None | ERR4796954 | MDR-TB | lineage3.1.2.1 | in | ERR4796963 | MDR-TB | lineage3 | in | ERR4797053 | MDR-TB | lineage3.1.2 | in | ERR4796970 | Sensitive | lineage3.1 | in | ERR4796852 | MDR-TB | lineage3.1.2;lineage2.2.1.1 | in | ERR4797118 | Sensitive | lineage4.3.3 | in | ERR4796972 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796329 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830066 | Sensitive | lineage2.2.1 | None | ERR4797002 | Sensitive | lineage2.2.1 | in | ERR4796684 | Sensitive | lineage3 | in | ERR4796334 | HR-TB | lineage1.2.2.2 | in | ERR4796848 | Sensitive | lineage4.4.2 | in | ERR4796705 | Sensitive | lineage3 | in | ERR4830062 | MDR-TB | lineage2.2.1 | None | ERR4829629 | Other | La1.2 | it | ERR4830181 | MDR-TB | lineage2.2.1 | None | ERR4797156 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830096 | HR-TB | lineage4.3.3 | None | ERR4797115 | Pre-XDR-TB | lineage2.2.1 | in | ERR4831254 | MDR-TB | lineage2.2.1 | de | ERR4797081 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796988 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797025 | Pre-XDR-TB | lineage3 | in | ERR4796876 | MDR-TB | lineage3.1.2.1 | in | ERR4830052 | MDR-TB | lineage2.2.1 | None |
---|