lineage | Count |
---|---|
La1.8.2 | 2 |
lineage4.1.1 | 1 |
lineage4.3.4.1 | 2 |
lineage2.2.1 | 19 |
lineage4.1.1.3 | 1 |
lineage4 | 1 |
lineage4.1.2 | 1 |
lineage4.3.3 | 4 |
lineage4.8 | 8 |
lineage1.2.1.1 | 2 |
lineage1.2.1.2 | 1 |
lineage3 | 7 |
lineage1.2.2.2 | 1 |
lineage4.3.4.2 | 1 |
1 | |
lineage4.5 | 3 |
lineage1.2.1.2.1 | 1 |
lineage4.1.2.1 | 4 |
lineage4.2.1 | 1 |
lineage6.3.1 | 1 |
lineage3.1.1 | 2 |
lineage4.2.1.1 | 3 |
lineage4.6.2.2 | 1 |
lineage4.7 | 1 |
lineage4.8;lineage2.2.1 | 1 |
lineage4.6.2 | 1 |
lineage4.2.2.1 | 1 |
lineage4.2.2.2 | 1 |
lineage4.3.2.1 | 1 |
lineage4.1 | 1 |
spoligotype | Count |
---|---|
None | 75 |
ID | Drug resistance | Lineage | Country iso2 | ERR6139643 | Other | La1.8.2 | None | ERR7764395 | Sensitive | lineage4.1.1 | None | ERR7764328 | HR-TB | lineage4.3.4.1 | None | ERR6140656 | Other | La1.8.2 | None | ERR11049929 | Sensitive | lineage2.2.1 | None | ERR11049981 | Sensitive | lineage2.2.1 | None | ERR7764424 | Other | lineage4.1.1.3 | None | ERR11050086 | HR-TB | lineage4 | None | ERR11050079 | Other | lineage4.1.2 | None | ERR11050092 | Sensitive | lineage4.3.3 | None | ERR11050087 | Sensitive | lineage4.8 | None | ERR11050525 | Sensitive | lineage2.2.1 | None | ERR11050097 | Sensitive | lineage1.2.1.1 | None | ERR11050102 | HR-TB | lineage1.2.1.2 | None | ERR11050182 | HR-TB | lineage3 | None | ERR11050200 | Sensitive | lineage1.2.2.2 | None | ERR11050207 | MDR-TB | lineage4.3.4.2 | None | SRR12006647 | Sensitive | None | ERR11050107 | Sensitive | lineage4.5 | None | ERR11050219 | Sensitive | lineage4.5 | None | ERR11050377 | Sensitive | lineage3 | None | ERR11050401 | Other | lineage3 | None | SRR12006628 | Sensitive | lineage1.2.1.2.1 | None | SRR14782599 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782337 | Sensitive | lineage4.3.3 | None | ERR11050582 | Sensitive | lineage4.1.2.1 | None | SRR14801767 | MDR-TB | lineage4.2.1 | None | ERR11050593 | Sensitive | lineage4.8 | None | ERR11050707 | Sensitive | lineage3 | None | SRR16088109 | MDR-TB | lineage2.2.1 | None | ERR11050680 | Sensitive | lineage4.3.3 | None | ERR11050765 | Sensitive | lineage6.3.1 | None | ERR11050764 | Sensitive | lineage3.1.1 | None | SRR18714778 | Sensitive | lineage4.2.1.1 | None | SRR18714799 | Sensitive | lineage4.3.4.1 | None | ERR11050725 | Sensitive | lineage4.8 | None | SRR18714801 | Sensitive | lineage4.3.3 | None | SRR18714899 | Other | lineage4.8 | None | SRR18715071 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR18714928 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714941 | Sensitive | lineage4.8 | None | SRR18714990 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714934 | MDR-TB | lineage2.2.1 | None | SRR18715302 | MDR-TB | lineage2.2.1 | None | SRR18715198 | MDR-TB | lineage4.1.2.1 | None | ERR11050773 | Sensitive | lineage4.6.2.2 | None | SRR18715107 | Sensitive | lineage2.2.1 | None | SRR18715116 | Sensitive | lineage4.7 | None | SRR18715149 | Sensitive | lineage2.2.1 | None | SRR18715199 | MDR-TB | lineage2.2.1 | None | SRR18715300 | Other | lineage2.2.1 | None | SRR18715359 | MDR-TB | lineage4.8;lineage2.2.1 | None | SRR18715369 | Other | lineage2.2.1 | None | SRR18715364 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715466 | Sensitive | lineage4.2.1.1 | None | ERR11050775 | Sensitive | lineage1.2.1.1 | None | ERR11050779 | Sensitive | lineage4.5 | None | ERR11050789 | Sensitive | lineage4.6.2 | None | ERR11081897 | Sensitive | lineage4.2.2.1 | None | ERR11050828 | Sensitive | lineage3.1.1 | None | ERR11050891 | Sensitive | lineage3 | None | ERR11050798 | HR-TB | lineage4.2.2.2 | None | ERR11050832 | Sensitive | lineage4.1.2.1 | None | ERR11080863 | Sensitive | lineage4.1.2.1 | None | ERR11081506 | HR-TB | lineage4.8 | None | SRR23862167 | Other | lineage4.8 | None | SRR23861838 | HR-TB | lineage2.2.1 | None | SRR23861888 | Sensitive | lineage4.8 | None | ERR10748309 | MDR-TB | lineage4.3.2.1 | None | SRR23938707 | HR-TB | lineage2.2.1 | None | SRR6650371 | Sensitive | lineage3 | None | ERR4831469 | MDR-TB | lineage3 | None | ERR11043751 | Sensitive | lineage2.2.1 | None | ERR11043747 | Sensitive | lineage4.1 | None | ERR11049443 | Pre-XDR-TB | lineage2.2.1 | None |
---|