lineage | Count |
---|---|
lineage1.2.1.2.1 | 8 |
lineage2.2.1 | 15 |
lineage4.4.2 | 1 |
lineage4.1.1.1 | 1 |
lineage6.2.2 | 1 |
lineage4.1.2.1 | 11 |
lineage1.1.3.1 | 1 |
lineage4.1.1 | 3 |
lineage4.8 | 7 |
lineage2.2.1.2 | 1 |
lineage2.2.2 | 3 |
lineage4.3.3 | 3 |
lineage2.2.1.1 | 3 |
lineage4.6.2.2 | 1 |
lineage4.1.2 | 1 |
La1.2.BCG | 1 |
lineage4.8.1 | 1 |
lineage3 | 6 |
lineage4.3.2 | 4 |
lineage1.2.1.2 | 4 |
lineage1.1.2 | 4 |
lineage4.9 | 1 |
lineage3.1.2.1 | 1 |
lineage1.2.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage1.2.2.2 | 2 |
La1.8.1 | 1 |
lineage4.3.4.1 | 1 |
spoligotype | Count |
---|---|
None | 88 |
ID | Drug resistance | Lineage | Country iso2 | SRR28860085 | Sensitive | lineage1.2.1.2.1 | None | SRR26112559 | Sensitive | lineage2.2.1 | None | SRR26111912 | Sensitive | lineage4.4.2 | None | SRR28859979 | Sensitive | lineage4.1.1.1 | None | SRR28868472 | Sensitive | lineage1.2.1.2.1 | None | SRR28860158 | Sensitive | lineage6.2.2 | None | SRR26112468 | Sensitive | lineage4.1.2.1 | None | SRR28860083 | Sensitive | lineage1.1.3.1 | None | SRR28860005 | Sensitive | lineage4.1.1 | None | SRR28860155 | HR-TB | lineage4.8 | None | SRR24799211 | Sensitive | lineage2.2.1.2 | None | SRR28859992 | Sensitive | lineage2.2.2 | None | SRR28860146 | Sensitive | lineage4.3.3 | None | SRR28859641 | Sensitive | lineage4.1.2.1 | None | SRR28859952 | Sensitive | lineage4.8 | None | SRR28858425 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR28859853 | Sensitive | lineage4.6.2.2 | None | SRR28860203 | Sensitive | lineage4.8 | None | SRR28860162 | Sensitive | lineage4.1.2 | None | SRR28858419 | RR-TB | lineage1.2.1.2.1 | None | SRR26112369 | Other | lineage2.2.1 | None | SRR28868376 | HR-TB | La1.2.BCG | None | SRR28859760 | HR-TB | lineage4.1.2.1 | None | SRR28858609 | Sensitive | lineage2.2.1 | None | SRR28860169 | Sensitive | lineage4.1.2.1 | None | SRR28859645 | HR-TB | lineage4.8.1 | None | SRR28858408 | Sensitive | lineage3 | None | SRR28860084 | Sensitive | lineage2.2.2 | None | SRR28859636 | Sensitive | lineage4.3.3 | None | SRR28868654 | Sensitive | lineage4.8 | None | SRR28860043 | Sensitive | lineage4.3.2 | None | SRR28859854 | Sensitive | lineage1.2.1.2 | None | SRR28860081 | Sensitive | lineage4.1.2.1 | None | SRR28859673 | Sensitive | lineage2.2.2 | None | SRR26112025 | Sensitive | lineage4.3.2 | None | SRR28860088 | Sensitive | lineage4.3.2 | None | SRR28858412 | Sensitive | lineage1.1.2 | None | SRR28859649 | HR-TB | lineage1.2.1.2.1 | None | SRR28860074 | Sensitive | lineage4.9 | None | SRR28859805 | Sensitive | lineage3 | None | SRR28868593 | Sensitive | lineage3.1.2.1 | None | SRR28859628 | HR-TB | lineage2.2.1 | None | SRR28859923 | Sensitive | lineage3 | None | SRR28858421 | MDR-TB | lineage2.2.1 | None | SRR26112560 | Sensitive | lineage4.1.1 | None | SRR26111963 | Sensitive | lineage4.1.2.1 | None | SRR28860200 | HR-TB | lineage2.2.1 | None | SRR27449993 | Sensitive | lineage1.2.1.2.1 | None | SRR28859918 | Sensitive | lineage4.1.2.1 | None | SRR28858608 | Sensitive | lineage3 | None | SRR28860106 | Other | lineage1.2.1.2.1 | None | SRR26112384 | Sensitive | lineage2.2.1.1 | None | SRR16088206 | XDR-TB | lineage2.2.1 | None | SRR28859787 | Sensitive | lineage1.2.2 | None | SRR28860057 | Other | lineage2.2.1 | None | SRR27450012 | Sensitive | lineage1.2.1.2 | None | SRR29440962 | Sensitive | lineage4.3.4.2.1 | None | SRR28859994 | Sensitive | lineage1.2.1.2 | None | SRR27450142 | Sensitive | lineage1.2.1.2.1 | None | SRR28858405 | Sensitive | lineage4.3.2 | None | ERR11050582 | Sensitive | lineage4.1.2.1 | None | SRR28859615 | Sensitive | lineage4.3.3 | None | SRR24710252 | Pre-XDR-TB | lineage2.2.1 | None | SRR26112352 | Sensitive | lineage2.2.1.1 | None | SRR26112017 | Sensitive | lineage2.2.1 | None | SRR28859985 | Sensitive | lineage2.2.1 | None | SRR18715199 | MDR-TB | lineage2.2.1 | None | ERR12311993 | Sensitive | lineage4.1.2.1 | None | SRR27450422 | Sensitive | lineage1.2.1.2 | None | SRR28860139 | HR-TB | lineage2.2.1 | None | SRR28859997 | Sensitive | lineage4.8 | None | SRR28859642 | Sensitive | lineage4.8 | None | SRR28860049 | Other | lineage4.1.2.1 | None | SRR28860077 | Sensitive | lineage4.1.2.1 | None | SRR28859659 | Sensitive | lineage1.2.2.2 | None | SRR21733122 | Other | lineage1.1.2 | None | SRR28858736 | Sensitive | lineage2.2.1 | None | SRR28859793 | Other | lineage1.1.2 | None | SRR28860164 | HR-TB | lineage1.1.2 | None | SRR28859792 | Sensitive | lineage4.1.1 | None | SRR28859813 | Sensitive | lineage1.2.1.2.1 | None | SRR28860183 | Sensitive | lineage4.8 | None | SRR28868599 | HR-TB | lineage2.2.1 | None | SRR28858603 | Sensitive | lineage1.2.2.2 | None | SRR28860131 | Other | La1.8.1 | None | SRR28859912 | Other | lineage3 | None | SRR28860204 | Sensitive | lineage4.3.4.1 | None | SRR27450394 | Sensitive | lineage3 | None |
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