lineage | Count |
---|---|
lineage3 | 2 |
lineage4.1.4 | 1 |
lineage1.1.2 | 2 |
lineage4.1.2.1 | 9 |
lineage6.1.1 | 1 |
lineage2.2.1 | 19 |
lineage1.2.1.2.1 | 1 |
lineage4.1.1 | 1 |
lineage4.8 | 11 |
lineage4.1.2 | 2 |
La1.2 | 1 |
La1.8.2 | 2 |
lineage4.2.2.2 | 2 |
lineage4.1.1.3 | 1 |
lineage4 | 1 |
lineage4.3.4.2 | 2 |
lineage1.1.3.2 | 1 |
lineage4.6.2.2 | 1 |
lineage4.2.1 | 3 |
lineage4.3.4.1 | 2 |
lineage4.3.3 | 2 |
lineage4.2.2.1 | 1 |
lineage4.4.1.1 | 1 |
lineage1.2.2.2 | 1 |
lineage4.2.1.1 | 2 |
La1.7.X-unk4 | 1 |
La1.4 | 1 |
spoligotype | Count |
---|---|
None | 74 |
ID | Drug resistance | Lineage | Country iso2 | ERR11067201 | Sensitive | lineage3 | None | ERR11049818 | Sensitive | lineage4.1.4 | None | ERR4829305 | Sensitive | lineage1.1.2 | None | ERR11067457 | HR-TB | lineage4.1.2.1 | None | SRR7131283 | Sensitive | lineage1.1.2 | None | SRR7131238 | Sensitive | lineage6.1.1 | None | ERR10748303 | MDR-TB | lineage2.2.1 | None | ERR11067627 | XDR-TB | lineage2.2.1 | None | ERR10680195 | MDR-TB | lineage4.1.2.1 | None | ERR4796943 | Sensitive | lineage1.2.1.2.1 | in | ERR10748302 | MDR-TB | lineage4.1.1 | None | ERR11043749 | Sensitive | lineage2.2.1 | None | ERR11049443 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049463 | Sensitive | lineage4.1.2.1 | None | ERR10748307 | MDR-TB | lineage2.2.1 | None | ERR10796624 | Other | lineage4.8 | None | ERR11044548 | Sensitive | lineage4.8 | None | ERR11049029 | HR-TB | lineage4.1.2.1 | None | ERR4796912 | Pre-XDR-TB | lineage2.2.1 | in | ERR11050095 | Sensitive | lineage4.1.2 | None | ERR6198204 | Other | La1.2 | None | ERR6139637 | Other | La1.8.2 | None | ERR6140805 | Other | La1.8.2 | None | ERR7737926 | MDR-TB | lineage4.2.2.2 | None | ERR7764424 | Other | lineage4.1.1.3 | None | ERR9125260 | Sensitive | lineage4.8 | None | SRR1158939 | Sensitive | lineage4 | None | ERR9286046 | Sensitive | lineage2.2.1 | None | ERR11050106 | Sensitive | lineage2.2.1 | None | ERR9811807 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR11050208 | MDR-TB | lineage4.3.4.2 | None | ERR11050239 | Sensitive | lineage1.1.3.2 | None | SRR14782480 | MDR-TB | lineage2.2.1 | None | ERR11050360 | Sensitive | lineage4.1.2.1 | None | ERR11050485 | Sensitive | lineage4.6.2.2 | None | ERR11050500 | Sensitive | lineage4.1.2.1 | None | ERR11050515 | Sensitive | lineage4.2.2.2 | None | SRR14781856 | MDR-TB | lineage4.2.1 | None | SRR14781914 | HR-TB | lineage2.2.1 | None | SRR14782413 | Other | lineage4.8 | None | SRR13232397 | Pre-XDR-TB | lineage2.2.1 | None | SRR14781919 | MDR-TB | lineage4.2.1 | None | SRR14782339 | Pre-XDR-TB | lineage4.2.1 | None | SRR14782711 | Sensitive | lineage4.3.4.1 | None | SRR14782566 | Sensitive | lineage4.8 | None | SRR14782578 | Sensitive | lineage2.2.1 | None | SRR14782546 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802110 | Sensitive | lineage2.2.1 | None | SRR14782714 | HR-TB | lineage2.2.1 | None | ERR11050708 | Sensitive | lineage3 | None | ERR11050621 | Sensitive | lineage4.1.2 | None | SRR16088144 | Sensitive | lineage2.2.1 | None | ERR11050680 | Sensitive | lineage4.3.3 | None | ERR11050681 | Sensitive | lineage4.2.2.1 | None | SRR16157094 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR11050619 | Sensitive | lineage1.2.2.2 | None | SRR18714778 | Sensitive | lineage4.2.1.1 | None | SRR18714950 | Sensitive | lineage4.1.2.1 | None | SRR18714932 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714936 | Sensitive | lineage2.2.1 | None | SRR18715011 | Sensitive | lineage4.1.2.1 | None | SRR18714983 | Sensitive | lineage4.1.2.1 | None | SRR18715288 | Other | lineage4.8 | None | SRR18715284 | Sensitive | lineage4.3.3 | None | SRR23861870 | Sensitive | lineage4.8 | None | ERR11081542 | Other | La1.7.X-unk4 | None | ERR11082586 | Sensitive | lineage4.8 | None | ERR11068921 | Other | lineage2.2.1 | None | SRR23862073 | Sensitive | lineage4.2.1.1 | None | ERR2229549 | Sensitive | lineage4.8 | None | SRR23562879 | Other | La1.4 | None | ERR7363044 | Sensitive | lineage4.3.4.1 | None | ERR1949975 | Other | lineage4.8 | None | ERR2229206 | Sensitive | lineage4.8 | None |
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