Rv0529 - c.-60T>G
Drug resistance types
164 Sensitive
7 RR-TB
21 HR-TB
30 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
87 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 9 |
| lineage4.2.1 | 2 |
| lineage1.2.2.2 | 3 |
| lineage2.2.1 | 32 |
| lineage4.1.2.1 | 14 |
| lineage4.7 | 7 |
| lineage2.2.1.1 | 4 |
| lineage3 | 25 |
| lineage4.6.2.2 | 5 |
| lineage4.2.2.2 | 4 |
| lineage4.4.1.1 | 12 |
| lineage1.1.3.1 | 5 |
| La1.6 | 3 |
| lineage2.2.2 | 2 |
| lineage4.1.1.3 | 6 |
| La1 | 1 |
| La1.8.1 | 30 |
| lineage4.8.1 | 1 |
| lineage4.8 | 19 |
| lineage4.3.3 | 9 |
| La1.7.1 | 5 |
| La2 | 4 |
| La1.2 | 4 |
| La1.7.X-unk4 | 1 |
| La1.7 | 1 |
| lineage4.3.4.2 | 6 |
| lineage4.1.2 | 8 |
| lineage4.3.2 | 2 |
| lineage4.4.1.1.1;lineage3.1.1 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage4.3.2.1 | 11 |
| lineage4.5 | 6 |
| lineage4.4.1.1.1 | 3 |
| lineage4.9 | 25 |
| lineage1.2.1.2.1 | 2 |
| lineage6.2.3 | 2 |
| lineage4.1 | 1 |
| lineage4.1.1 | 3 |
| lineage4;lineage1.2.2.1 | 1 |
| 6 | |
| lineage1.1.3 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.2;lineage2.2.1 | 1 |
| lineage4 | 3 |
| La1.8.2 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2 | 1 |
| lineage4.6 | 1 |
| lineage5.1.4 | 1 |
| lineage4.4 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.3 | 1 |
| lineage3.1.1 | 3 |
| lineage4.2.2.2;lineage3.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.1.1.2 | 1 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 317 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9117838 | Sensitive | lineage1.1.2 | None | ERR9117765 | HR-TB | lineage4.2.1 | None | ERR9657199 | Sensitive | lineage1.2.2.2 | None | ERR9657179 | Other | lineage1.1.2 | None | ERR9786035 | Sensitive | lineage2.2.1 | None | ERR9786140 | Sensitive | lineage4.1.2.1 | None | ERR9786255 | Sensitive | lineage4.7 | None | ERR9786190 | Sensitive | lineage4.1.2.1 | None | ERR983232 | MDR-TB | lineage4.7 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR9891964 | Sensitive | lineage4.7 | None | ERR9899672 | Sensitive | lineage4.1.2.1 | None | ERR9891970 | Other | lineage3 | None | ERR9891998 | Sensitive | lineage4.6.2.2 | None | ERR9893151 | Sensitive | lineage4.2.2.2 | None | ERR9891972 | Sensitive | lineage4.4.1.1 | None | ERR9891993 | Other | lineage1.1.3.1 | None | SRR023473 | Sensitive | lineage4.1.2.1 | None | SRR10993940 | Other | La1.6 | None | SRR023485 | MDR-TB | lineage4.2.2.2 | None | SRR10272570 | Sensitive | lineage4.4.1.1 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR023478 | MDR-TB | lineage4.1.1.3 | None | SRR10272558 | Sensitive | lineage4.4.1.1 | None | SRR10993938 | Other | La1.6 | None | SRR1144755 | MDR-TB | lineage2.2.1 | None | SRR10993956 | Other | La1.6 | None | SRR11294527 | HR-TB | La1 | None | SRR11418335 | Other | La1.8.1 | None | SRR11462888 | Other | La1.8.1 | None | SRR1144806 | MDR-TB | lineage4.2.2.2 | None | SRR11462874 | Other | La1.8.1 | None | SRR11972165 | MDR-TB | lineage2.2.1.1 | None | SRR1165670 | MDR-TB | lineage4.8.1 | None | SRR1159682 | Sensitive | lineage2.2.1 | None | SRR11972399 | MDR-TB | lineage2.2.1 | None | SRR11972168 | Sensitive | lineage3 | None | SRR11972281 | MDR-TB | lineage2.2.1 | None | SRR11972413 | MDR-TB | lineage1.1.2 | None | SRR11972418 | MDR-TB | lineage4.7 | None | SRR12634537 | Sensitive | lineage4.2.2.2 | None | SRR1203934 | Sensitive | lineage2.2.1 | None | SRR11972443 | Sensitive | lineage3 | None | SRR12634634 | Sensitive | lineage4.8 | None | SRR12634554 | Sensitive | lineage3 | None | SRR12634630 | Sensitive | lineage2.2.1 | None | SRR13870377 | MDR-TB | lineage4.3.3 | None | SRR13199744 | Other | La1.7.1 | None | SRR13591394 | Sensitive | lineage4.3.3 | None | SRR13888755 | Sensitive | La2 | None | SRR13986567 | Other | La1.2 | None | SRR13986565 | Other | La1.7.X-unk4 | None | SRR13986560 | Other | La1.7 | None | SRR16115013 | HR-TB | lineage4.3.4.2 | None | SRR14088376 | MDR-TB | lineage3 | None | SRR14296148 | Other | La1.8.1 | None | SRR14296239 | Other | La1.8.1 | None | SRR14296270 | Other | La1.8.1 | None | SRR14296310 | Other | La1.8.1 | None | SRR14296393 | Other | La1.8.1 | None | SRR14296408 | Other | La1.8.1 | None | SRR16089848 | Sensitive | lineage4.2.1 | None | SRR14296140 | Other | La1.8.1 | None | SRR14296196 | Other | La1.8.1 | None | SRR14296254 | Other | La1.8.1 | None | SRR14296403 | Other | La1.8.1 | None | SRR15296920 | HR-TB | La1.7.1 | None | SRR16089549 | MDR-TB | lineage4.4.1.1 | None | SRR16115017 | Sensitive | lineage3 | None | SRR1640346 | Sensitive | lineage4.1.2 | None | SRR16115087 | Other | lineage3 | None | SRR16370373 | Sensitive | lineage2.2.1 | None | SRR16370435 | HR-TB | lineage2.2.1 | None | SRR17156538 | Sensitive | La2 | None | SRR1640711 | Sensitive | lineage4.1.2 | None | SRR18910199 | HR-TB | lineage4.8 | None | SRR1791868 | Other | La1.7.1 | None | SRR1791870 | Other | La1.7.1 | None | SRR1791889 | Other | La1.8.1 | None | SRR1791926 | Other | La1.8.1 | None | SRR18391687 | Other | La1.7.1 | None | SRR1791913 | Other | La1.8.1 | None | SRR1791974 | Other | La1.8.1 | None | SRR18213729 | Sensitive | lineage3 | None | SRR18910206 | Sensitive | lineage3 | None | SRR18911593 | Other | lineage3 | None | SRR18910994 | HR-TB | lineage4.3.4.2 | None | SRR19276598 | Pre-XDR-TB | lineage4.3.3 | None | SRR18913783 | Sensitive | lineage4.7 | None | SRR19314670 | Sensitive | lineage4.3.2 | None | SRR2101546 | Sensitive | lineage4.4.1.1.1;lineage3.1.1 | None | SRR2101409 | Sensitive | lineage4.3.4.2.1 | None | SRR2101492 | Other | lineage4.3.2.1 | None | SRR19324963 | Other | lineage2.2.1 | None | SRR2101407 | Sensitive | lineage2.2.1 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR2101628 | Other | lineage4.3.2.1 | None | SRR21657458 | Sensitive | lineage4.5 | None | SRR2101678 | Sensitive | lineage4.4.1.1.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR21239903 | Sensitive | lineage4.3.3 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR21657447 | Sensitive | lineage4.1.1.3 | None | SRR21678365 | Sensitive | lineage4.8 | None | SRR21675441 | HR-TB | lineage1.2.1.2.1 | None | SRR21674627 | HR-TB | lineage4.5 | None | SRR21675708 | HR-TB | lineage4.1.2.1 | None | SRR21675859 | Sensitive | lineage4.6.2.2 | None | SRR21678380 | Sensitive | lineage4.1.2 | None | SRR21727879 | Sensitive | lineage4.3.3 | None | SRR21728325 | Sensitive | lineage1.1.2 | None | SRR21727880 | Sensitive | lineage4.3.4.2 | None | SRR22048371 | Sensitive | lineage1.1.2 | None | SRR21031686 | MDR-TB | lineage2.2.1 | None | SRR23174198 | Other | La1.8.1 | None | ERR551399 | Sensitive | lineage4.3.3 | None | ERR551439 | Sensitive | lineage6.2.3 | None | ERR552159 | Sensitive | lineage4.1 | None | ERR551550 | Sensitive | lineage4.8 | None | SRR6650243 | Sensitive | lineage4.1.1 | None | ERR552521 | Sensitive | lineage4.8 | None | ERR552308 | Sensitive | lineage4.3.3 | None | SRR8662665 | Pre-XDR-TB | lineage2.2.1 | None | SRR6650168 | Sensitive | lineage4.3.4.2 | None | SRR6650379 | Sensitive | lineage4.5 | None | SRR6650390 | Sensitive | lineage4;lineage1.2.2.1 | None | SRR6797415 | Other | lineage2.2.1 | None | SRR6650111 | Sensitive | lineage1.2.2.2 | None | SRR6797509 | Sensitive | lineage4.5 | None | SRR6650127 | Sensitive | None | SRR6650108 | Sensitive | lineage1.1.3 | None | SRR6650404 | Sensitive | lineage2.2.1 | None | SRR6650117 | Sensitive | lineage4.4.1.2 | None | SRR6650345 | Other | lineage1.1.3.1 | None | SRR6650175 | Sensitive | lineage1.2.2.2 | None | SRR6797837 | Sensitive | lineage4.8 | None | SRR6797712 | Other | lineage4.3.4.2;lineage2.2.1 | None | SRR6797630 | HR-TB | lineage4 | None | SRR6650210 | Sensitive | lineage1.1.3.1 | None | SRR6650193 | Sensitive | lineage3 | None | SRR6650299 | Other | lineage1.1.3.1 | None | SRR6650230 | MDR-TB | lineage2.2.1 | None | ERR4815619 | Sensitive | lineage4.9 | None | SRR6650399 | Sensitive | lineage4.1.2.1 | None | ERR4815310 | Other | None | SRR3091244 | Other | La1.8.1 | None | SRR3091240 | Other | La1.8.1 | None | ERR4814442 | Other | lineage4.4.1.1 | None | SRR3091246 | Other | La1.8.1 | None | ERR4815374 | Sensitive | lineage3 | None | ERR4815007 | Sensitive | lineage3 | None | SRR3135067 | Other | La1.8.2 | None | SRR3205963 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815413 | Other | lineage4.3.4.2.1 | None | ERR4814531 | MDR-TB | lineage3.1.2 | None | ERR4815456 | Sensitive | lineage3 | None | ERR4814690 | Sensitive | lineage2.2.1 | None | ERR4815485 | Sensitive | lineage4.9 | None | ERR4814874 | MDR-TB | lineage1.1.2 | None | ERR4815975 | Sensitive | lineage4.1.2.1 | None | ERR4815075 | MDR-TB | lineage3 | None | ERR1950055 | Sensitive | lineage4.8 | None | ERR212034 | HR-TB | None | SRR3675533 | Sensitive | lineage3 | None | ERR4817346 | Sensitive | lineage4.9 | None | SRR3675591 | HR-TB | lineage4.6.2.2 | None | ERR4816300 | Other | lineage4.1.2.1 | None | SRR3675573 | Sensitive | lineage4.8 | None | ERR4816748 | Sensitive | lineage4.9 | None | SRR3732652 | Sensitive | lineage4.6.2.2 | None | ERR4816560 | Sensitive | lineage4.9 | None | ERR4816627 | Other | lineage2.2 | None | ERR4817423 | Sensitive | lineage4.8 | None | ERR4817144 | Sensitive | lineage1.1.2 | None | ERR2229649 | Sensitive | lineage4.8 | None | SRR4034111 | Sensitive | lineage2.2.1 | None | SRR4033144 | Sensitive | lineage4.1.2 | None | ERR4816897 | Sensitive | lineage4.9 | None | ERR4817284 | Other | lineage4.6.2.2 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR4817788 | Sensitive | lineage4.6 | None | ERR2228903 | RR-TB | lineage4 | None | SRR1735686 | Sensitive | lineage4.1.2.1 | None | ERR4816902 | Sensitive | lineage4.9 | None | ERR2513092 | Sensitive | lineage1.1.3 | None | ERR234145 | Sensitive | lineage5.1.4 | None | ERR4818769 | Other | lineage4.9 | None | ERR2432986 | Pre-XDR-TB | lineage4.8 | None | ERR2513446 | Sensitive | lineage3 | None | ERR234212 | Sensitive | lineage4.9 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR2513443 | Sensitive | lineage4.3.4.2.1 | None | ERR4818904 | Other | lineage4.8 | None | ERR2433013 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | SRR4037743 | HR-TB | lineage4.4.1.1 | None | ERR2503380 | Sensitive | lineage4.4.1.1 | None | ERR2509674 | Sensitive | lineage3 | None | SRR5073986 | Sensitive | lineage2.2.1 | None | ERR4817567 | Sensitive | lineage4.9 | None | ERR2503379 | Other | lineage4.1.2 | None | ERR2513302 | Other | La1.8.1 | None | ERR4817622 | Sensitive | lineage4.9 | None | ERR2513895 | Sensitive | lineage4.8 | None | ERR2513364 | Sensitive | lineage4.1.2.1 | None | ERR4820764 | Other | lineage4.9 | None | ERR2514308 | Other | lineage3 | None | ERR4819839 | Sensitive | lineage1.1.2 | None | ERR2514443 | Sensitive | lineage4.4 | None | ERR4819794 | Sensitive | lineage4.8 | None | SRR5486076 | Other | La1.2 | None | ERR4819913 | Sensitive | lineage4.8 | None | ERR4820137 | Sensitive | lineage3 | None | ERR4820608 | Sensitive | lineage4.9 | None | SRR5486079 | Other | La1.2 | None | SRR5486084 | Other | La1.2 | None | ERR2659167 | Sensitive | None | SRR6045480 | Other | lineage4.1.1 | None | ERR2653098 | Pre-XDR-TB | lineage4.7 | None | ERR2653103 | MDR-TB | lineage4.3.2 | None | ERR4821206 | Sensitive | lineage4.1.2.1 | None | ERR4821948 | Sensitive | lineage4.9 | None | ERR4822130 | Sensitive | lineage3 | None | ERR4821548 | Other | lineage3 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045308 | Other | lineage3.1.2.2 | None | ERR4821705 | Sensitive | None | SRR6045704 | Sensitive | lineage4.9 | None | SRR6046003 | Sensitive | lineage4.9 | None | SRR6046179 | HR-TB | lineage4.1.3 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6046115 | Sensitive | lineage3 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046430 | Sensitive | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046607 | Other | lineage3 | None | SRR6046735 | Sensitive | lineage4.8 | None | SRR6046870 | Sensitive | lineage4.1.1.3 | None | ERR3077963 | MDR-TB | lineage4.2.2.2;lineage3.1.1 | None | SRR6484975 | MDR-TB | lineage2.2.1 | None | ERR3077962 | RR-TB | lineage3.1.1 | None | SRR6046874 | Other | lineage4.5 | None | SRR6982100 | Sensitive | lineage4.4.1.1.1 | None | SRR6982407 | MDR-TB | lineage2.2.1 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | SRR6982093 | Sensitive | lineage4.3.4.2.1 | None | SRR6896303 | HR-TB | lineage4.4.1.1 | None | SRR6982125 | Sensitive | lineage4.3.2.1 | None | SRR6982415 | HR-TB | lineage4.9.1 | None | SRR6896230 | Sensitive | lineage4.3.2.1 | None | SRR6982132 | Sensitive | lineage4.4.1.1.1 | None | SRR6896280 | Other | lineage4.1.1.3 | None | SRR6832098 | MDR-TB | lineage4.3.3 | None | SRR6797438 | Other | lineage2.2.1.2 | None | SRR6982180 | Sensitive | lineage4.1.1.2 | None | SRR6832410 | HR-TB | lineage4.7 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR6982445 | Sensitive | lineage4.3.4.2 | None | SRR6982252 | Sensitive | lineage4.3.2.1 | None | SRR6982264 | Other | lineage4.1.1.3 | None | SRR6964657 | Sensitive | lineage3 | None | SRR6982290 | HR-TB | lineage4.3.2.1 | None | SRR6982293 | Sensitive | lineage4.3.2.1 | None | SRR6981927 | Sensitive | lineage4.3.2.1 | None | SRR6981954 | Sensitive | lineage4.3.3 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR6981966 | Other | lineage2.2.1 | None | SRR6981957 | Sensitive | lineage2.2.1.1 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982383 | Other | lineage4.3.2.1 | None | SRR6982013 | Sensitive | lineage2.2.1 | None | SRR6831749 | MDR-TB | lineage2.2.1 | None | SRR6831725 | Sensitive | lineage4.8 | None | SRR6982516 | Sensitive | lineage4.4.1.1 | None | ERR3077930 | MDR-TB | lineage3.1.1 | None | SRR6982507 | Sensitive | lineage4.4.1.1 | None | SRR8073612 | Other | La1.8.1 | None | SRR8073621 | Other | La1.8.1 | None | SRR8073641 | Other | La1.8.1 | None | SRR8073661 | Other | La1.8.1 | None | SRR8073645 | Other | La1.8.1 | None | SRR8073646 | Other | La1.8.1 | None | SRR8073657 | Other | La1.8.1 | None | SRR9940958 | Sensitive | lineage4.9 | None | SRR8073675 | Other | La1.8.1 | None | SRR9940989 | Sensitive | lineage4.9 | None | SRR9940961 | Sensitive | lineage4.9 | None | SRR9940993 | Sensitive | lineage4.9 | None | SRR9940998 | Sensitive | lineage4.9 | None | SRR9940976 | Sensitive | lineage4.9 | None | SRR9940995 | Sensitive | lineage4.9 | None | DRR034474 | Sensitive | lineage4.5 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR184932 | Other | lineage2.2.1 | None | ERR10430714 | Sensitive | La2 | None | ERR10370892 | Other | lineage4.9 | None | ERR025425 | Other | lineage4.1.2 | None | ERR3509870 | Pre-XDR-TB | lineage2.2.1 | None | ERR10430719 | Sensitive | La2 | None | ERR1367692 | Sensitive | lineage4.3.4.2 | None | ERR3509867 | MDR-TB | lineage4.3.4.2.1 | None | ERR3803811 | Sensitive | lineage6.2.3 | None | ERR3803784 | Sensitive | lineage6 | None | ERR3803804 | Sensitive | lineage2.2.1 | None | ERR3803913 | Sensitive | lineage6.3.1 | None | ERR392507 | Other | lineage2.2.1.2 | None | ERR3803991 | Other | lineage6.1.3 | None | ERR4407480 | Sensitive | lineage4.1.2 | None | ERR392508 | Sensitive | lineage2.2.1.1 | None | ERR4407531 | Sensitive | lineage4.4.1.1 | None | ERR4407520 | Sensitive | lineage4.8 | None | ERR5908260 | Sensitive | lineage1.2.1.2.1 | None | ERR4407530 | HR-TB | lineage4.1.2.1 | None | ERR5864428 | MDR-TB | lineage2.2.1 | None | ERR779667 | Sensitive | lineage4.1.1.3 | None | ERR6358951 | HR-TB | lineage4 | None | ERR779670 | Sensitive | lineage4.1.2 | None |
|---|
