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SRA data
Rv0639
- c.564C>T
Drug resistance types
2 Sensitive
0 RR-TB
6 HR-TB
25 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
3 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.2.1
23
lineage4.9
5
lineage2.2.1;lineage4.2.1
3
lineage4.1.2;lineage4.2.1
2
lineage2.1;lineage4.1.4;lineage4.9
1
lineage4.2;lineage4.9
1
M.canetti;lineage4.2;lineage4.9
1
lineage4.9;lineage7
1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
38
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067629
MDR-TB
lineage4.2.1
ru
ERR067748
MDR-TB
lineage4.2.1
ru
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR11043317
MDR-TB
lineage4.2.1
None
ERR11081497
MDR-TB
lineage4.2.1
None
ERR13284791
MDR-TB
lineage4.2.1
None
ERR13288865
MDR-TB
lineage2.2.1;lineage4.2.1
None
ERR13288866
MDR-TB
lineage4.1.2;lineage4.2.1
None
ERR13288867
MDR-TB
lineage4.2.1
None
ERR3797036
HR-TB
lineage2.1;lineage4.1.4;lineage4.9
None
Showing 1 to 10 of 38 entries
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