lineage | Count |
---|---|
lineage2.2.1 | 34 |
lineage2.2.2 | 1 |
lineage4.1 | 4 |
lineage4.3.4.2 | 1 |
lineage4.9.1 | 2 |
lineage1.1.2 | 1 |
lineage4.1.1 | 2 |
lineage4.4.1.1 | 2 |
lineage4.8 | 1 |
lineage4.2.1 | 1 |
lineage4.2.2.2 | 1 |
lineage4.5 | 1 |
lineage2.2;lineage4.8 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 53 |
ID | Drug resistance | Lineage | Country iso2 | ERR4798368 | Pre-XDR-TB | lineage2.2.1 | in | SRR29093398 | MDR-TB | lineage2.2.1 | None | SRR29539271 | MDR-TB | lineage2.2.1 | None | ERR550911 | MDR-TB | lineage2.2.1 | None | ERR9030526 | XDR-TB | lineage2.2.1 | None | ERR13191076 | Pre-XDR-TB | lineage2.2.2 | None | SRR10397114 | MDR-TB | lineage4.1 | None | SRR28044618 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093151 | MDR-TB | lineage2.2.1 | None | ERR1034836 | MDR-TB | lineage4.3.4.2 | pt | SRR29093631 | MDR-TB | lineage4.9.1 | None | ERR4797438 | Pre-XDR-TB | lineage2.2.1 | in | SRR15014617 | MDR-TB | lineage1.1.2 | None | SRR11662650 | MDR-TB | lineage2.2.1 | None | ERR5866489 | MDR-TB | lineage2.2.1 | None | ERR4024916 | MDR-TB | lineage4.1.1 | None | ERR10762438 | MDR-TB | lineage2.2.1 | None | ERR552387 | MDR-TB | lineage2.2.1 | None | SRR9588009 | MDR-TB | lineage4.4.1.1 | None | SRR7653082 | Pre-XDR-TB | lineage4.8 | None | SRR29093767 | MDR-TB | lineage4.9.1 | None | SRR21887770 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207219 | MDR-TB | lineage2.2.1 | None | ERR4831578 | XDR-TB | lineage2.2.1 | None | SRR25515563 | MDR-TB | lineage2.2.1 | None | SRR10869198 | MDR-TB | lineage2.2.1 | None | SRR29539010 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774364 | MDR-TB | lineage4.1 | None | ERR13285702 | MDR-TB | lineage2.2.1 | None | ERR552040 | MDR-TB | lineage2.2.1 | None | ERR13243565 | MDR-TB | lineage2.2.1 | None | ERR11069110 | MDR-TB | lineage4.2.1 | None | ERR552083 | MDR-TB | lineage4.4.1.1 | sz | ERR4796389 | Pre-XDR-TB | lineage2.2.1 | in | SRR29093746 | MDR-TB | lineage2.2.1 | None | ERR5865958 | MDR-TB | lineage4.1 | None | ERR4830792 | MDR-TB | lineage4.2.2.2 | et | ERR6866031 | MDR-TB | lineage4.1.1 | None | SRR7070071 | MDR-TB | lineage4.5 | None | SRR18002889 | MDR-TB | lineage2.2;lineage4.8 | None | ERR8774365 | MDR-TB | lineage4.1 | None | ERR13284781 | MDR-TB | lineage2.2.1 | None | ERR5865920 | MDR-TB | lineage2.2.1 | None | SRR29093410 | MDR-TB | lineage2.2.1 | None | ERR5866488 | MDR-TB | lineage2.2.1 | None | SRR29055534 | MDR-TB | lineage2.2.1 | None | ERR551939 | Pre-XDR-TB | lineage2.2.1 | None | SRR29055535 | MDR-TB | lineage2.2.1 | None | SRR11662719 | MDR-TB | lineage2.2.1 | None | ERR550847 | MDR-TB | lineage2.2.1 | None | SRR25515236 | MDR-TB | lineage2.2.1 | None | ERR552222 | Pre-XDR-TB | lineage2.2.1 | None | SRR29081645 | MDR-TB | lineage4.1.1.3 | None |
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