lineage | Count |
---|---|
lineage2.2.2 | 2 |
lineage4.3.3 | 5 |
lineage4.5 | 3 |
lineage2.2.1 | 35 |
lineage4.3.4.2 | 4 |
lineage6.2.2 | 1 |
lineage4.7 | 2 |
lineage2.2.1.1 | 1 |
lineage4.6.1.2 | 2 |
lineage3 | 3 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 59 |
ID | Drug resistance | Lineage | Country iso2 | SRR16370391 | Pre-XDR-TB | lineage2.2.2 | None | SRR8698482 | MDR-TB | lineage4.3.3 | None | ERR9125330 | MDR-TB | lineage4.5 | None | ERR553208 | MDR-TB | lineage2.2.1 | uz | ERR4800588 | Pre-XDR-TB | lineage2.2.1 | in | SRR20969468 | Pre-XDR-TB | lineage2.2.1 | None | ERR3273092 | MDR-TB | lineage2.2.1 | None | SRR25827722 | Pre-XDR-TB | lineage2.2.1 | None | SRR8698496 | MDR-TB | lineage4.3.3 | None | ERR9029857 | MDR-TB | lineage4.3.4.2 | None | ERR10680134 | MDR-TB | lineage6.2.2 | None | ERR552873 | MDR-TB | lineage2.2.1 | None | SRR1180396 | MDR-TB | lineage2.2.1 | None | SAMEA2534973 | MDR-TB | lineage2.2.1 | uz | SRR25827535 | Pre-XDR-TB | lineage2.2.1 | None | ERR751586 | MDR-TB | lineage4.3.3 | pe | ERR11082138 | MDR-TB | lineage4.3.3 | None | SRR671738 | MDR-TB | lineage2.2.1 | cn | ERR4799160 | Pre-XDR-TB | lineage2.2.1 | in | ERR13267082 | Pre-XDR-TB | lineage2.2.1 | None | ERR552872 | MDR-TB | lineage2.2.1 | None | SRR9971214 | MDR-TB | lineage2.2.1 | None | SRR16088334 | MDR-TB | lineage2.2.1 | None | SRR1019140 | MDR-TB | lineage2.2.1 | None | SAMEA2534893 | MDR-TB | lineage2.2.1 | uz | SAMN02585979 | MDR-TB | lineage2.2.1 | za | ERR4797504 | Pre-XDR-TB | lineage2.2.1 | in | SRR1180315 | MDR-TB | lineage2.2.1 | None | SRR7592358 | MDR-TB | lineage4.7 | None | SRR25827312 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11488681 | MDR-TB | lineage4.3.4.2 | None | SRR9738524 | MDR-TB | lineage4.7 | None | SRR5535857 | MDR-TB | lineage4.6.1.2 | None | ERR552772 | MDR-TB | lineage2.2.1 | None | SRR12420610 | MDR-TB | lineage2.2.1 | None | SRR16058058 | MDR-TB | lineage4.5 | None | SRR1181356 | MDR-TB | lineage2.2.1 | None | SAMEA5569854 | MDR-TB | lineage4.3.4.2 | None | ERR552771 | MDR-TB | lineage2.2.1 | None | ERR4423679 | RR-TB | lineage3 | None | ERR4799876 | Pre-XDR-TB | lineage2.2.1 | in | ERR4423678 | MDR-TB | lineage3 | None | SRR12420700 | MDR-TB | lineage2.2.1 | None | ERR7911151 | Pre-XDR-TB | lineage2.2.2 | vn | ERR3273177 | MDR-TB | lineage2.2.1 | None | ERR552873_ERR552872_ERR552874 | MDR-TB | lineage2.2.1 | None | ERR7911374 | MDR-TB | lineage4.3.3 | pe | SAMN02350465 | MDR-TB | lineage2.2.1 | za | SRR1140901 | MDR-TB | lineage2.2.1 | None | ERR2510342 | Pre-XDR-TB | lineage3 | pk | ERR2510543 | Pre-XDR-TB | lineage4.5 | pk | SRR5535858 | MDR-TB | lineage4.6.1.2 | None | ERR11082741 | MDR-TB | lineage2.2.1 | None | ERR13266150 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175236 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287661 | MDR-TB | lineage4.3.4.2 | None | ERR552874 | MDR-TB | lineage2.2.1 | None | ERR4809283 | MDR-TB | lineage4.1.1.3 | za | ERR552772_ERR552771 | MDR-TB | lineage2.2.1 | None |
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