lineage | Count |
---|---|
lineage2.2.1 | 18 |
lineage4.2.2.2 | 6 |
lineage4.2.1.1 | 3 |
lineage4.3.4.2 | 7 |
lineage4.8 | 7 |
lineage4.3.2.1 | 3 |
lineage2.2.1.1 | 4 |
lineage4.1.2.1 | 2 |
lineage3 | 3 |
lineage4.3.4.1 | 1 |
lineage4.1.1.3 | 1 |
lineage6.3.1 | 2 |
lineage2.2.1;lineage4.2.2.2 | 1 |
lineage1.2.1.2.1 | 1 |
lineage3.1.1 | 1 |
lineage1.2.1.2.1;lineage2.2.1 | 1 |
La1.8;lineage4.3.2 | 1 |
lineage4.1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 63 |
ID | Drug resistance | Lineage | Country iso2 | SRR12420748 | RR-TB | lineage2.2.1 | None | SRR12420684 | RR-TB | lineage2.2.1 | None | ERR7737675 | MDR-TB | lineage4.2.2.2 | None | SRR5710017 | Pre-XDR-TB | lineage4.2.1.1 | th | SRR13583510 | MDR-TB | lineage4.3.4.2 | None | SRR6356974 | MDR-TB | lineage2.2.1 | None | SRR28393262 | MDR-TB | lineage4.8 | None | SRR12420331 | Pre-XDR-TB | lineage2.2.1 | None | SRR29273715 | Pre-XDR-TB | lineage4.8 | None | ERR11081050 | MDR-TB | lineage4.2.2.2 | None | SRR1140952 | MDR-TB | lineage4.3.2.1 | None | SRR21887775 | RR-TB | lineage2.2.1.1 | None | ERR11050946 | MDR-TB | lineage4.1.2.1 | None | ERR4828988 | RR-TB | lineage4.3.4.2 | None | ERR233381 | MDR-TB | lineage3 | None | ERR7737647 | MDR-TB | lineage4.2.2.2 | None | SRR29051050 | MDR-TB | lineage4.3.4.2 | None | ERR8650527 | MDR-TB | lineage4.3.4.1 | None | SRR12420803 | MDR-TB | lineage2.2.1 | None | SRR22251101 | MDR-TB | lineage4.1.1.3 | None | SAMN02350476 | MDR-TB | lineage4.3.2.1 | za | SRR12420745 | Pre-XDR-TB | lineage2.2.1 | None | ERR11067661 | MDR-TB | lineage6.3.1 | None | SRR21674620 | MDR-TB | lineage4.2.2.2 | None | SRR25827527 | Pre-XDR-TB | lineage2.2.1;lineage4.2.2.2 | None | ERR12790845 | MDR-TB | lineage4.3.4.2 | None | SRR28044756 | MDR-TB | lineage3 | None | SRR29050638 | MDR-TB | lineage4.3.4.2 | None | SRR12142424 | Pre-XDR-TB | lineage2.2.1 | None | SRR5338518 | MDR-TB | lineage1.2.1.2.1 | None | SRR11972385 | MDR-TB | lineage2.2.1.1 | None | ERR9119914 | MDR-TB | lineage2.2.1.1 | None | SRR5709953 | MDR-TB | lineage2.2.1 | th | SRR1019169 | MDR-TB | lineage4.3.2.1 | None | SRR5709752 | Pre-XDR-TB | lineage4.2.1.1 | th | ERR1035286 | Pre-XDR-TB | lineage4.1.2.1 | br | SRR1196473 | RR-TB | lineage2.2.1 | None | SRR13583499 | MDR-TB | lineage4.3.4.2 | None | SAMN02585991 | RR-TB | lineage2.2.1 | za | SRR1367226 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827753 | XDR-TB | lineage3 | None | ERR3148184 | MDR-TB | lineage4.3.4.2 | mx | ERR6362376 | MDR-TB | lineage2.2.1.1 | None | ERR4829106 | MDR-TB | lineage3.1.1 | dj | SRR1184344 | RR-TB | lineage2.2.1 | None | SRR12420653 | MDR-TB | lineage2.2.1 | None | SRR3742668 | Pre-XDR-TB | lineage2.2.1 | None | SRR26936996 | MDR-TB | lineage1.2.1.2.1;lineage2.2.1 | None | ERR2516535 | MDR-TB | lineage4.2.1.1 | nl | SRR1367221 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276281 | MDR-TB | lineage4.2.2.2 | None | SRR26937137 | MDR-TB | lineage2.2.1 | None | ERR8976033 | MDR-TB | lineage4.8 | None | ERR4797166 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR6930892 | Pre-XDR-TB | La1.8;lineage4.3.2 | None | SRR29273728 | Pre-XDR-TB | lineage4.8 | None | ERR8975011 | MDR-TB | lineage4.1.1.1 | None | ERR4827840 | Pre-XDR-TB | lineage2.2.1 | None | SRR24466786 | Pre-XDR-TB | lineage4.8 | None | ERR7911129 | MDR-TB | lineage2.2.1 | None | ERR13285150 | MDR-TB | lineage6.3.1 | None | ERR5918088 | MDR-TB | lineage4.8 | za | ERR8975863 | MDR-TB | lineage4.8 | None |
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