lineage | Count |
---|---|
lineage1.2.2.2 | 3 |
lineage4.2.1.1 | 15 |
lineage4.2.2 | 1 |
lineage2.2.1 | 20 |
lineage3.1.1 | 1 |
lineage3 | 5 |
lineage1.1.2 | 3 |
lineage4.3.3 | 4 |
lineage4.1.1.3 | 2 |
lineage4.3.2 | 6 |
lineage4.1.2.1 | 3 |
lineage4.4.2 | 3 |
lineage2.1 | 2 |
lineage4.3.4.2.1 | 2 |
lineage4.5 | 2 |
lineage4.2.2.2 | 1 |
lineage4.3.2.1 | 1 |
spoligotype | Count |
---|---|
None | 74 |
ID | Drug resistance | Lineage | Country iso2 | ERR4796725 | MDR-TB | lineage1.2.2.2 | in | ERR13276334 | MDR-TB | lineage4.2.1.1 | None | SRR10040356 | Pre-XDR-TB | lineage4.2.2 | None | ERR551457 | MDR-TB | lineage2.2.1 | None | ERR4798772 | Pre-XDR-TB | lineage1.2.2.2 | in | SRR18715336 | MDR-TB | lineage4.2.1.1 | None | ERR11068705 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR13286160 | MDR-TB | lineage3.1.1 | None | SRR25534159 | MDR-TB | lineage2.2.1 | None | ERR4812959 | Sensitive | lineage2.2.1 | pe | ERR13260063 | MDR-TB | lineage3 | None | SAMN02599088 | Sensitive | lineage1.1.2 | None | ERR550721 | MDR-TB | lineage2.2.1 | None | ERR8773738 | RR-TB | lineage4.3.3 | None | ERR550850 | MDR-TB | lineage2.2.1 | None | SRR16156811 | MDR-TB | lineage4.1.1.3 | None | SRR24255963 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR13261988 | MDR-TB | lineage1.2.2.2 | None | SRR29051040 | RR-TB | lineage4.3.2 | None | SRR7517749 | RR-TB | lineage4.3.3 | None | SRR29017002 | RR-TB | lineage4.3.2 | None | ERR1465792 | MDR-TB | lineage4.1.2.1 | None | SRR25207045 | MDR-TB | lineage4.4.2 | None | SRR5817473 | MDR-TB | lineage2.1 | au | ERR551472 | MDR-TB | lineage2.2.1 | None | SRR18715177 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832019 | HR-TB | lineage4.2.1.1 | None | ERR4808880 | MDR-TB | lineage4.3.4.2.1 | za | ERR1367652 | MDR-TB | lineage4.1.2.1 | None | ERR4810471 | Pre-XDR-TB | lineage4.5 | cn | SRR6832785 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR5865954 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812960 | Sensitive | lineage2.2.1 | pe | SRR9224994 | RR-TB | lineage4.3.2 | None | ERR13284822 | MDR-TB | lineage2.2.1 | None | SRR13583305 | RR-TB | lineage4.3.2 | None | SRR29681470 | MDR-TB | lineage4.2.1.1 | None | ERR13284545 | MDR-TB | lineage2.2.1 | None | SRR29681466 | MDR-TB | lineage4.2.1.1 | None | SRR25207096 | Pre-XDR-TB | lineage4.5 | None | ERR4809313 | MDR-TB | lineage4.3.4.2.1 | za | SRR28858513 | MDR-TB | lineage4.2.1.1 | None | ERR551972 | MDR-TB | lineage2.2.1 | None | SRR20969766 | MDR-TB | lineage4.4.2 | None | ERR13289314 | MDR-TB | lineage4.1.1.3 | None | SRR29681278 | HR-TB | lineage4.2.1.1 | None | ERR13284792 | MDR-TB | lineage2.2.1 | None | ERR8975137 | HR-TB | lineage4.2.2.2 | None | ERR9907712 | MDR-TB | lineage4.3.2 | None | ERR2510525 | MDR-TB | lineage3 | pk | ERR2510503 | MDR-TB | lineage3 | pk | SAMEA3715554 | MDR-TB | lineage4.1.2.1 | al | ERR2653203 | MDR-TB | lineage4.3.2 | None | SRR10040182 | MDR-TB | lineage4.4.2 | None | SRR7517764 | MDR-TB | lineage4.3.3 | None | SRR28045808 | HR-TB | lineage3 | None | ERR11082191 | MDR-TB | lineage2.2.1 | None | ERR11082706 | MDR-TB | lineage2.1 | None | ERR550851 | MDR-TB | lineage2.2.1 | None | ERR11082156 | MDR-TB | lineage4.2.1.1 | None | ERR9806867 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR23340102 | MDR-TB | lineage4.2.1.1 | None | SRR1173117 | Sensitive | lineage1.1.2 | None | ERR10762416 | MDR-TB | lineage4.2.1.1 | None | ERR552344 | MDR-TB | lineage2.2.1 | None | SRR1173287 | Sensitive | lineage1.1.2 | None | ERR8773737 | RR-TB | lineage4.3.3 | None | SRR14088380 | MDR-TB | lineage3 | None | SRR11662597 | MDR-TB | lineage2.2.1 | None | SRR29385511 | XDR-TB | lineage2.2.1 | None | SRR15316221 | MDR-TB | lineage2.2.1 | None | SRR24256334 | MDR-TB | lineage4.2.1.1 | None | ERR13284502 | MDR-TB | lineage2.2.1 | None | ERR7361947 | MDR-TB | lineage4.2.1.1 | None |
---|