lineage | Count |
---|---|
lineage2.2.1 | 16 |
lineage4.9 | 2 |
lineage4.3.4.1 | 1 |
lineage5.1.3 | 1 |
lineage4.5 | 1 |
lineage2.1 | 1 |
lineage4.4.2 | 3 |
lineage4.6.1.2 | 2 |
lineage1.1.2 | 1 |
lineage3 | 3 |
lineage1.2.1.2.1 | 1 |
lineage4.1.2.1 | 2 |
lineage4.2.1 | 1 |
lineage6.2.2 | 1 |
lineage2.2.1.1 | 1 |
lineage2.2.1;lineage3 | 1 |
spoligotype | Count |
---|---|
None | 38 |
ID | Drug resistance | Lineage | Country iso2 | SRR21887753 | Pre-XDR-TB | lineage2.2.1 | None | ERR4423622 | Pre-XDR-TB | lineage4.9 | None | ERR1034815 | Pre-XDR-TB | lineage4.3.4.1 | pt | ERR11067190 | MDR-TB | lineage5.1.3 | None | SRR12420638 | RR-TB | lineage2.2.1 | None | ERR8774236 | Pre-XDR-TB | lineage4.9 | None | ERR4827729 | RR-TB | lineage4.5 | None | ERR4828703 | MDR-TB | lineage2.2.1 | vn | SRR11828965 | MDR-TB | lineage2.1 | None | ERR502928 | Pre-XDR-TB | lineage2.2.1 | None | SRR671740 | Pre-XDR-TB | lineage4.4.2 | cn | ERR1654656 | MDR-TB | lineage4.6.1.2 | None | ERR4827802 | MDR-TB | lineage2.2.1 | None | SRR29017688 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800661 | MDR-TB | lineage1.1.2 | None | SRR12420816 | Pre-XDR-TB | lineage4.4.2 | None | SRR6964574 | MDR-TB | lineage3 | None | SRR29017235 | Pre-XDR-TB | lineage2.2.1 | None | SRR5709864 | MDR-TB | lineage2.2.1 | th | ERR4811045 | MDR-TB | lineage2.2.1 | cn | ERR4819673 | MDR-TB | lineage1.2.1.2.1 | gb | ERR9993017 | XDR-TB | lineage4.1.2.1 | None | ERR2706960 | MDR-TB | lineage4.6.1.2 | cd | SRR4423151 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081370 | MDR-TB | lineage4.2.1 | None | ERR4553920 | Pre-XDR-TB | lineage2.2.1 | None | SRR6485039 | MDR-TB | lineage4.1.2.1 | None | ERR4553903 | MDR-TB | lineage2.2.1 | None | SRR8651660 | Pre-XDR-TB | lineage4.4.2 | cn | ERR10680134 | MDR-TB | lineage6.2.2 | None | ERR4831439 | Pre-XDR-TB | lineage3 | None | ERR1035099 | Pre-XDR-TB | lineage2.2.1.1 | vn | SRR20969466 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553951 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827848 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR25206964 | MDR-TB | lineage2.2.1 | None | ERR550405 | Pre-XDR-TB | lineage2.2.1 | None | ERR3335781 | Pre-XDR-TB | lineage3 | pk |
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