lineage | Count |
---|---|
lineage4.8 | 2 |
lineage2.2.1 | 38 |
lineage4 | 3 |
lineage4.3.3 | 3 |
lineage4;lineage3 | 1 |
lineage3 | 5 |
lineage4.3.4.2.1 | 2 |
lineage4.1.1.3 | 6 |
lineage3.1.2 | 1 |
lineage4.1.2.1 | 12 |
lineage6 | 1 |
lineage1.2.2.2 | 2 |
lineage4.3.2 | 1 |
lineage4.2.2.2 | 3 |
lineage4.1.1 | 2 |
lineage4.7 | 1 |
lineage4.2.2.2;lineage2.2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.6.1.2 | 2 |
lineage2.2 | 1 |
spoligotype | Count |
---|---|
None | 88 |
ID | Drug resistance | Lineage | Country iso2 | ERR4831471 | Pre-XDR-TB | lineage4.8 | pk | ERR3287719 | MDR-TB | lineage2.2.1 | pe | ERR3287846 | XDR-TB | lineage4 | pe | ERR4813970 | RR-TB | lineage4.3.3 | br | ERR4829940 | Pre-XDR-TB | lineage4;lineage3 | pk | ERR2510476 | RR-TB | lineage3 | pk | ERR11043176 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043661 | MDR-TB | lineage4.3.3 | None | ERR3639712 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639793 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011996 | MDR-TB | lineage4.3.4.2.1 | None | ERR4012002 | MDR-TB | lineage4.3.4.2.1 | None | ERR4553870 | Pre-XDR-TB | lineage2.2.1 | None | ERR4809071 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2510637 | MDR-TB | lineage3.1.2 | pk | ERR11043175 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044279 | MDR-TB | lineage4.1.2.1 | None | ERR3806631 | MDR-TB | lineage6 | None | ERR4553883 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515615 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4831465 | Pre-XDR-TB | lineage4.8 | None | ERR5865071 | MDR-TB | lineage2.2.1 | None | ERR5865165 | MDR-TB | lineage2.2.1 | None | ERR5865070 | MDR-TB | lineage2.2.1 | None | ERR5865072 | MDR-TB | lineage2.2.1 | None | ERR5865069 | MDR-TB | lineage2.2.1 | None | ERR5865643 | MDR-TB | lineage2.2.1 | None | ERR5865162 | MDR-TB | lineage2.2.1 | None | ERR5865164 | MDR-TB | lineage2.2.1 | None | ERR5865163 | MDR-TB | lineage2.2.1 | None | ERR5865512 | MDR-TB | lineage4.1.2.1 | None | ERR5865513 | MDR-TB | lineage4.1.2.1 | None | ERR5865638 | MDR-TB | lineage2.2.1 | None | ERR5865642 | MDR-TB | lineage2.2.1 | None | ERR5865639 | MDR-TB | lineage2.2.1 | None | ERR5866594 | MDR-TB | lineage4.1.2.1 | None | ERR7737639 | MDR-TB | lineage2.2.1 | None | ERR6362240 | MDR-TB | lineage4.1.1.3 | None | ERR9119771 | MDR-TB | lineage4.1.1.3 | None | SRR15014789 | MDR-TB | lineage1.2.2.2 | None | SRR13232771 | Pre-XDR-TB | lineage4.3.3 | None | SRR15014607 | MDR-TB | lineage3 | None | ERR11069028 | MDR-TB | lineage4.1.2.1 | None | SRR20969956 | MDR-TB | lineage2.2.1 | None | SRR15368767 | RR-TB | lineage2.2.1 | None | SRR19276635 | MDR-TB | lineage4.3.2 | None | SRR24673509 | MDR-TB | lineage2.2.1 | None | SRR25827771 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR10610077 | MDR-TB | lineage4.1.1 | None | ERR11081121 | Pre-XDR-TB | lineage4.7 | None | SRR24114344 | MDR-TB | lineage1.2.2.2 | None | ERR11080918 | MDR-TB | lineage4.1.2.1 | None | ERR9806624 | MDR-TB | lineage4.1.1 | None | SRR10828634 | RR-TB | lineage2.2.1 | None | SRR21887679 | Pre-XDR-TB | lineage2.2.1 | None | SRR671748 | MDR-TB | lineage2.2.1 | cn | SRR25206872 | MDR-TB | lineage2.2.1 | None | SRR25515368 | MDR-TB | lineage2.2.1 | None | SRR25827820 | Pre-XDR-TB | lineage4.2.2.2;lineage2.2.1 | None | SRR3105788 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR24673552 | MDR-TB | lineage4.1.2.1 | None | SAMN03246286 | MDR-TB | lineage2.2.1 | cn | ERR133867 | MDR-TB | lineage2.2.1 | ru | SRR6824677 | MDR-TB | lineage2.2.1 | cn | ERR229997 | MDR-TB | lineage2.2.1 | ru | ERR2707206 | MDR-TB | lineage4.6.1.2 | cd | ERR2706996 | RR-TB | lineage3 | cd | SRR20969667 | MDR-TB | lineage2.2 | None | ERR1199127 | MDR-TB | lineage4.6.1.2 | cd | ERR133935 | MDR-TB | lineage2.2.1 | ru | ERR229947 | Pre-XDR-TB | lineage2.2.1 | ru | ERR117462 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4798914 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR4798912 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR2516414 | MDR-TB | lineage4 | pe | ERR2516757 | Pre-XDR-TB | lineage4.2.2.2 | gb | ERR2516725 | MDR-TB | lineage4.1.2.1 | nl | ERR4798022 | Pre-XDR-TB | lineage4.1.1.3 | in | ERR2516675 | Pre-XDR-TB | lineage2.2.1 | pe | ERR2516541 | XDR-TB | lineage4 | pe | ERR3335762 | MDR-TB | lineage3 | pk | ERR4798282 | MDR-TB | lineage3 | in | ERR4800424 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR4800303 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR4797338 | Pre-XDR-TB | lineage4.1.1.3 | in | ERR4831005 | Pre-XDR-TB | lineage4.2.2.2 | np | ERR4832043 | MDR-TB | lineage2.2.1 | None | ERR4813444 | MDR-TB | lineage2.2.1 | pe |
---|