lineage | Count |
---|---|
lineage4.6.2.2 | 8 |
lineage4.7 | 13 |
lineage3 | 4 |
lineage2.2.1 | 14 |
lineage4.3.3 | 2 |
lineage2.2.2 | 1 |
lineage4.4.1.1 | 5 |
lineage4.8 | 5 |
lineage4.5 | 2 |
lineage4.1.2.1;lineage4.8 | 1 |
lineage4.3.2 | 1 |
lineage1.2.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 57 |
ID | Drug resistance | Lineage | Country iso2 | ERR9119493 | MDR-TB | lineage4.6.2.2 | None | ERR4872044 | XDR-TB | lineage4.7 | None | ERR11080936 | MDR-TB | lineage3 | None | SRR25207185 | MDR-TB | lineage2.2.1 | None | ERR4872043 | Pre-XDR-TB | lineage4.7 | None | ERR4872042 | XDR-TB | lineage4.7 | None | ERR2653178 | MDR-TB | lineage4.3.3 | None | ERR4872086 | MDR-TB | lineage4.6.2.2 | None | SRR25389514 | Pre-XDR-TB | lineage2.2.1 | None | ERR13194010 | Pre-XDR-TB | lineage2.2.2 | None | ERR4810622 | XDR-TB | lineage2.2.1 | cn | ERR2041775 | RR-TB | lineage4.4.1.1 | rs | SRR29289236 | XDR-TB | lineage3 | None | ERR2041745 | RR-TB | lineage4.4.1.1 | rs | SRR21887760 | XDR-TB | lineage2.2.1 | None | ERR13284646 | MDR-TB | lineage3 | None | ERR2041774 | RR-TB | lineage4.4.1.1 | rs | SRR24114360 | MDR-TB | lineage3 | None | ERR4872047 | XDR-TB | lineage4.7 | None | ERR9119490 | MDR-TB | lineage4.6.2.2 | None | ERR9119571 | MDR-TB | lineage4.6.2.2 | None | ERR4872039 | XDR-TB | lineage4.7 | None | ERR4872045 | XDR-TB | lineage4.7 | None | ERR4811128 | Pre-XDR-TB | lineage2.2.1 | cn | ERR11082913 | MDR-TB | lineage4.8 | None | SRR6797862 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082377 | Pre-XDR-TB | lineage4.7 | None | SRR25389525 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284758 | MDR-TB | lineage4.8 | None | ERR4872040 | Pre-XDR-TB | lineage4.7 | None | ERR4810977 | Pre-XDR-TB | lineage4.5 | cn | ERR4872173 | MDR-TB | lineage4.6.2.2 | None | SRR25207110 | XDR-TB | lineage2.2.1 | None | ERR1555039 | RR-TB | lineage4.8 | None | ERR2200092 | RR-TB | lineage4.4.1.1 | rs | SRR25206930 | MDR-TB | lineage2.2.1 | None | ERR11082159 | MDR-TB | lineage4.1.2.1;lineage4.8 | None | ERR11082585 | MDR-TB | lineage4.8 | None | SRR25389528 | Pre-XDR-TB | lineage2.2.1 | None | SRR25389524 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872084 | MDR-TB | lineage4.6.2.2 | None | SRR25389486 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284944 | MDR-TB | lineage4.3.3 | None | SRR25207239 | Pre-XDR-TB | lineage4.5 | None | ERR4872049 | Pre-XDR-TB | lineage4.7 | None | ERR4872041 | Pre-XDR-TB | lineage4.7 | None | ERR2041784 | RR-TB | lineage4.4.1.1 | rs | ERR4872048 | XDR-TB | lineage4.7 | None | ERR038747 | MDR-TB | lineage4.8 | ug | ERR4872046 | XDR-TB | lineage4.7 | None | ERR9119492 | MDR-TB | lineage4.6.2.2 | None | SRR19276635 | MDR-TB | lineage4.3.2 | None | ERR4872037 | XDR-TB | lineage4.7 | None | ERR4872087 | MDR-TB | lineage4.6.2.2 | None | ERR4811316 | MDR-TB | lineage2.2.1 | cn | SRR25389526 | Pre-XDR-TB | lineage2.2.1 | None | SRR5338521 | MDR-TB | lineage1.2.1.2.1 | None |
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