Rv0667 - p.Pro45Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
22 RR-TB
0 HR-TB
156 MDR-TB
89 Pre-XDR-TB
6 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 97 |
| lineage4.1.2.1 | 32 |
| lineage4.8 | 22 |
| lineage4.3.2 | 8 |
| lineage4.3.4.2 | 3 |
| lineage4.4.1.1 | 5 |
| lineage3 | 10 |
| lineage4.3.3 | 3 |
| lineage2.2.1.2 | 6 |
| lineage4.7 | 1 |
| lineage2.2.1.1 | 3 |
| lineage3.1.2 | 5 |
| lineage4.1.1.1 | 20 |
| lineage4.1.1.3 | 7 |
| lineage2.2.2 | 18 |
| lineage4 | 4 |
| lineage4.1 | 2 |
| lineage2.2.1.2;lineage4.1.1.3 | 1 |
| lineage4.2.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.5 | 4 |
| lineage4.1.1.3;lineage4.1.2.1 | 1 |
| lineage4.8.1 | 2 |
| lineage2.2.2;lineage4.9 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.6.2.2 | 2 |
| 4 | |
| lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2 | 1 |
| lineage4.1.1 | 1 |
| lineage1.2.2.2;lineage3;lineage4.4.1.1 | 1 |
| lineage2.1 | 2 |
| lineage4.1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 273 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4827814 | MDR-TB | lineage2.2.1 | None | ERR9806967 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR28706494 | MDR-TB | lineage2.2.1 | None | ERR4872165 | MDR-TB | lineage4.8 | None | ERR4827699 | MDR-TB | lineage2.2.1 | None | ERR13260675 | RR-TB | lineage4.3.2 | None | ERR6358856 | MDR-TB | lineage4.3.4.2 | None | SRR5486905 | RR-TB | lineage4.8 | None | SRR25206935 | MDR-TB | lineage2.2.1 | None | ERR3287878 | MDR-TB | lineage4.1.2.1 | pe | ERR11138649 | Pre-XDR-TB | lineage2.2.1 | None | ERR10680070 | MDR-TB | lineage4.4.1.1 | None | ERR11082910 | MDR-TB | lineage3 | None | SRR1047988 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358857 | MDR-TB | lineage4.3.4.2 | None | SAMEA5569681 | MDR-TB | lineage4.1.2.1 | None | SRR13232645 | MDR-TB | lineage2.2.1 | None | SRR10380061 | MDR-TB | lineage4.3.3 | None | ERR6397188 | MDR-TB | lineage3 | None | ERR9119573 | MDR-TB | lineage4.8 | None | ERR403295 | MDR-TB | lineage2.2.1 | None | ERR2600512 | MDR-TB | lineage2.2.1 | None | ERR4178150 | RR-TB | lineage4.3.2 | None | SRR25827692 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR11068094 | RR-TB | lineage4.7 | None | ERR9119565 | MDR-TB | lineage4.8 | None | ERR6397212 | MDR-TB | lineage3 | None | SRR29385489 | MDR-TB | lineage2.2.1.1 | None | SRR1180464 | RR-TB | lineage3.1.2 | None | SRR28119845 | Pre-XDR-TB | lineage2.2.1 | None | SRR13243560 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256202 | MDR-TB | lineage2.2.1 | None | SRR29017631 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR13106398 | MDR-TB | lineage3 | None | SRR29803446 | MDR-TB | lineage4.1.1.3 | None | SRR28239581 | MDR-TB | lineage2.2.1 | None | SRR29539042 | MDR-TB | lineage2.2.1 | None | SRR29538910 | MDR-TB | lineage2.2.1 | None | ERR13245345 | Pre-XDR-TB | lineage2.2.2 | None | ERR551450 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681373 | MDR-TB | lineage2.2.1 | None | SRR29803444 | MDR-TB | lineage4.1.1.3 | None | ERR4457843 | MDR-TB | lineage4 | None | ERR13266699 | Pre-XDR-TB | lineage2.2.1 | None | SRR16087880 | MDR-TB | lineage2.2.1 | None | SRR29539278 | MDR-TB | lineage2.2.1 | None | ERR5864234 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872145 | MDR-TB | lineage4.8 | None | ERR108477 | MDR-TB | lineage2.2.1 | ru | SRR29093796 | MDR-TB | lineage3 | None | ERR13260354 | MDR-TB | lineage4.1.2.1 | None | ERR13258488 | Pre-XDR-TB | lineage2.2.2 | None | SRR1169539 | MDR-TB | lineage3.1.2 | None | SRR29803436 | MDR-TB | lineage4.1.1.3 | None | SRR18715091 | RR-TB | lineage4.1 | None | ERR4797994 | Pre-XDR-TB | lineage2.2.1.2;lineage4.1.1.3 | in | SRR1172136 | MDR-TB | lineage3.1.2 | None | ERR3273217 | MDR-TB | lineage4.8 | None | SRR29539203 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261617 | MDR-TB | lineage4 | None | ERR4822418 | Pre-XDR-TB | lineage2.2.1 | ua | ERR13266719 | Pre-XDR-TB | lineage4.2.2 | None | SRR1049009 | Pre-XDR-TB | lineage2.2.2 | None | ERR4799353 | Pre-XDR-TB | lineage4.8 | None | ERR13191375 | MDR-TB | lineage2.2.2 | None | ERR3287874 | MDR-TB | lineage4.1.2.1 | pe | ERR3287879 | MDR-TB | lineage4.1.2.1 | pe | SRR28393603 | MDR-TB | lineage4.8 | None | SRR25395618 | Pre-XDR-TB | lineage2.2.1 | None | ERR751481 | MDR-TB | lineage4.1.2.1 | pe | ERR8665539 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811278 | RR-TB | lineage2.2.1 | cn | ERR7911581 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2707185 | RR-TB | lineage4.1.1.1 | cd | ERR10610150 | MDR-TB | lineage4.8 | None | ERR4800482 | MDR-TB | lineage2.2.1.2 | None | ERR4813617 | RR-TB | lineage4.3.2 | None | ERR038742 | MDR-TB | lineage4.8 | ug | ERR1873534 | Pre-XDR-TB | lineage4.1.2.1 | za | SRR7341695 | MDR-TB | lineage4 | ro | ERR1213950 | MDR-TB | lineage4.1.1.1 | bd | SRR1049010 | Pre-XDR-TB | lineage2.2.2 | None | SRR28706687 | MDR-TB | lineage2.2.1 | None | SRR6797627 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR3132270 | MDR-TB | lineage4.1.1.1 | None | SRR18715255 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255899 | Pre-XDR-TB | lineage2.2.1 | None | SRR26397810 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR9029861 | MDR-TB | lineage4.1.2.1 | None | SRR7496554 | MDR-TB | lineage4.1.2.1 | us | SRR1180256 | RR-TB | lineage3.1.2 | None | SRR1013623 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515670 | RR-TB | lineage4.1.1.3 | None | SRR24710082 | MDR-TB | lineage2.2.1 | None | ERR4811312 | MDR-TB | lineage2.2.1 | cn | SRR25207087 | MDR-TB | lineage2.2.2 | None | SRR1144805 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144820 | Pre-XDR-TB | lineage2.2.1 | None | ERR551582 | MDR-TB | lineage2.2.1 | None | ERR551582_ERR551581 | MDR-TB | lineage2.2.1 | None | SRR25207221 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681218 | MDR-TB | lineage2.2.1 | None | ERR11068680 | MDR-TB | lineage3 | None | SRR28706436 | MDR-TB | lineage2.2.1 | None | SRR29093665 | MDR-TB | lineage3 | None | ERR11775964 | MDR-TB | lineage4.5 | None | ERR9806691 | MDR-TB | lineage4.8 | None | SRR28394303 | MDR-TB | lineage4.1.2.1 | None | SRR16088331 | MDR-TB | lineage2.2.1 | None | SRR29096618 | Pre-XDR-TB | lineage4.1.1.3;lineage4.1.2.1 | None | ERR6397167 | MDR-TB | lineage4.1.2.1 | None | SRR29017204 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR7737630 | MDR-TB | lineage3 | None | SRR25207155 | MDR-TB | lineage2.2.1 | None | SRR16088564 | MDR-TB | lineage2.2.1 | None | ERR4872175 | MDR-TB | lineage4.8 | None | SRR29273750 | MDR-TB | lineage4.1.2.1 | None | ERR9907755 | Pre-XDR-TB | lineage4.8.1 | None | ERR11043393 | MDR-TB | lineage4.8 | None | SRR29231003 | RR-TB | lineage4.1.1.1 | None | SRR16087913 | XDR-TB | lineage2.2.1 | None | ERR13264939 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR29538911 | Pre-XDR-TB | lineage2.2.1 | None | SRR29385423 | Pre-XDR-TB | lineage2.2.2 | None | SRR11662396 | Pre-XDR-TB | lineage4.5 | None | SRR7516353 | RR-TB | lineage4.1.2.1 | None | ERR13284231 | Pre-XDR-TB | lineage2.2.1 | None | ERR13258387 | Pre-XDR-TB | lineage2.2.2;lineage4.9 | None | SRR15465769 | MDR-TB | lineage2.2.1.2 | None | SRR10040226 | MDR-TB | lineage2.2.1 | None | ERR13261126 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR29539086 | Pre-XDR-TB | lineage2.2.1 | None | SRR29289279 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR17787489 | MDR-TB | lineage2.2.1 | None | ERR2510421 | Pre-XDR-TB | lineage4.1.1.1 | pk | SRR29539673 | MDR-TB | lineage2.2.1 | None | SRR28119842 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798392 | Pre-XDR-TB | lineage4.8 | in | ERR4799073 | Pre-XDR-TB | lineage4.8 | in | ERR4596933 | RR-TB | lineage4.6.1.1 | None | ERR4872126 | MDR-TB | lineage4.6.2.2 | None | ERR4830163 | MDR-TB | lineage2.2.1 | tj | SRR29385354 | Pre-XDR-TB | lineage2.2.1.1 | None | SAMN02360592 | Pre-XDR-TB | lineage2.2.2 | kr | ERR6397203 | MDR-TB | lineage4.1.2.1 | None | SRR21887763 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810902 | RR-TB | lineage2.2.1 | None | SRR13423596 | MDR-TB | lineage2.2.1 | None | ERR3287488 | MDR-TB | lineage4.1.2.1 | None | ERR4553879 | MDR-TB | None | SRR28119838 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811336 | MDR-TB | lineage2.2.2 | cn | ERR8665895 | MDR-TB | lineage2.2.1 | None | SRR28393663 | MDR-TB | lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2 | None | ERR7911520 | MDR-TB | lineage2.2.1.1 | vn | ERR9119549 | MDR-TB | lineage4.8 | None | ERR4812998 | MDR-TB | lineage4.1.1 | pe | ERR9119592 | MDR-TB | lineage4.8 | None | SRR20632812 | RR-TB | lineage2.2.1 | None | SRR23938590 | MDR-TB | lineage2.2.1 | None | SRR12142359 | MDR-TB | lineage2.2.1 | None | ERR552662 | MDR-TB | lineage4.4.1.1 | None | ERR2516377 | MDR-TB | lineage2.2.1 | be | ERR2041794 | MDR-TB | lineage4.8 | rs | ERR2041722 | MDR-TB | lineage4.8 | rs | SRR16088423 | MDR-TB | lineage2.2.1 | None | SRR26397809 | XDR-TB | lineage4.3.4.1 | None | SRR25207348 | MDR-TB | lineage2.2.2 | None | SRR14164417 | MDR-TB | lineage4.1.2.1 | None | SRR24710201 | MDR-TB | lineage2.2.1 | None | ERR2145512 | MDR-TB | lineage4.1.2.1 | None | SRR6458413 | Pre-XDR-TB | lineage2.2.1 | None | SRR28434989 | MDR-TB | lineage2.2.1 | None | ERR2653177 | MDR-TB | lineage4.3.2 | None | ERR13266583 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR11776007 | MDR-TB | lineage4.1.2.1 | None | ERR2510676 | MDR-TB | lineage4.1.2.1 | it | ERR6865682 | RR-TB | lineage4.3.2 | None | SRR4423149 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR1035006 | Pre-XDR-TB | lineage4.1.2.1 | za | SRR18715468 | MDR-TB | lineage2.2.1 | None | SRR16088421 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119532 | MDR-TB | lineage4.6.2.2 | None | ERR2600513 | MDR-TB | lineage2.2.1 | None | SRR29681242 | MDR-TB | lineage2.2.1 | None | SRR29273770 | MDR-TB | lineage4.1.2.1 | None | SRR28119742 | Pre-XDR-TB | lineage2.2.1 | None | ERR13264957 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR28741128 | MDR-TB | lineage2.2.1 | None | ERR13260510 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1013624 | Pre-XDR-TB | lineage2.2.2 | None | ERR13284109 | MDR-TB | lineage3 | None | ERR13284871 | MDR-TB | lineage2.2.1 | None | SRR17787491 | MDR-TB | lineage2.2.1 | None | DRR130065 | Pre-XDR-TB | lineage2.2.2;lineage4.9 | None | SRR29539028 | MDR-TB | lineage2.2.1 | None | ERR2307667 | MDR-TB | lineage2.2.1 | None | SRR21887787 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017199 | XDR-TB | lineage4.1.1.1 | None | SRR29803450 | MDR-TB | lineage4.1.1.3 | None | SRR10040538 | MDR-TB | lineage2.2.1 | None | SRR24256143 | MDR-TB | lineage2.2.1 | None | ERR3273155 | MDR-TB | lineage4.1.2.1 | None | SRR18715090 | RR-TB | lineage4.1 | None | SRR13232726 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969970 | RR-TB | lineage2.2.2 | None | SRR28119785 | Pre-XDR-TB | lineage2.2.1 | None | ERR551581 | MDR-TB | lineage2.2.1 | None | ERR2307522 | MDR-TB | lineage2.2.1 | None | SRR29803440 | MDR-TB | lineage4.1.1.3 | None | ERR2653122 | XDR-TB | lineage4.3.4.2 | None | ERR13290740 | MDR-TB | lineage4.5 | None | SRR25206926 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715472 | MDR-TB | lineage2.2.1 | None | SRR29093924 | Pre-XDR-TB | lineage2.2.2 | None | ERR6397174 | MDR-TB | lineage4.1.2.1 | None | SRR29231828 | RR-TB | lineage4.1.1.1 | None | SRR5486877 | MDR-TB | lineage4 | None | ERR10680185 | MDR-TB | lineage4.4.1.1 | None | SRR29289278 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR2510453 | Pre-XDR-TB | lineage4.8 | pk | SRR17658015 | MDR-TB | lineage4.1.1.1 | None | ERR4800090 | Pre-XDR-TB | lineage4.2.2 | in | SRR29093901 | MDR-TB | lineage2.2.1 | None | ERR4798003 | Pre-XDR-TB | lineage2.2.1.2 | in | DRR130080 | Pre-XDR-TB | lineage2.2.2 | None | ERR4796787 | MDR-TB | lineage1.2.2.2;lineage3;lineage4.4.1.1 | in | SAMN02398702 | Pre-XDR-TB | lineage2.2.1 | kr | SRR8651571 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4822343 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02398701 | Pre-XDR-TB | lineage2.2.1 | kr | SRR22536486 | MDR-TB | lineage4.3.3 | None | SAMN02599048 | MDR-TB | lineage3.1.2 | in | SRR20969463 | Pre-XDR-TB | lineage2.2.1 | None | SRR671855 | Pre-XDR-TB | lineage2.2.2 | cn | SRR12072598 | Pre-XDR-TB | lineage2.1 | None | SRR12072599 | Pre-XDR-TB | lineage2.1 | None | ERR4811322 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4553932 | Pre-XDR-TB | None | ERR4553894 | XDR-TB | None | ERR4553863 | Pre-XDR-TB | None | ERR4810997 | Pre-XDR-TB | lineage2.2.1 | cn | ERR9907685 | MDR-TB | lineage4.8.1 | None | SRR28393575 | MDR-TB | lineage4.1.2.1 | None | SRR27069424 | MDR-TB | lineage4.5 | None | ERR4810480 | MDR-TB | lineage2.2.2 | cn | ERR7911320 | MDR-TB | lineage2.2.1 | vn | ERR2707116 | RR-TB | lineage4.1.1.1 | cd | ERR4813016 | RR-TB | lineage4.3.2 | pe | ERR4830781 | Pre-XDR-TB | lineage4.1.2.1 | et | ERR779905 | MDR-TB | lineage4.1.2.1 | pe | SRR24256040 | MDR-TB | lineage2.2.1 | None | ERR4830815 | Pre-XDR-TB | lineage4.1.2.1 | et | ERR2510665 | MDR-TB | lineage4.3.3 | it | SAMEA2534045 | MDR-TB | lineage2.2.1 | uz | ERR760759 | MDR-TB | lineage4.1.2.1.1 | ar | ERR2516761 | MDR-TB | lineage4.4.1.1 | gb | ERR2516970 | MDR-TB | lineage4.4.1.1 | gb | ERR2515950 | MDR-TB | lineage4.1.1.1 | za | SRR6824489 | MDR-TB | lineage2.2.1 | cn | SRR6831854 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260021 | MDR-TB | lineage3 | None | ERR13260345 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13285126 | MDR-TB | lineage4.8 | None | ERR4553917 | MDR-TB | lineage4.1.1.1 | None | ERR4872194 | MDR-TB | lineage4.8 | None | SRR6256990 | MDR-TB | lineage4.1.2.1 | ru | ERR067626 | MDR-TB | lineage2.2.1 | ru | SRR16088543 | XDR-TB | lineage2.2.1 | None | SRR29017586 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR29803447 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4972551 | MDR-TB | lineage4.3.2 | None |
|---|
