lineage | Count |
---|---|
lineage4.1.2.1 | 2 |
lineage1.1.2 | 1 |
lineage4.2.1 | 20 |
lineage3.1.2;lineage4.2.2.2;lineage4.3.3 | 1 |
lineage2.2.1 | 15 |
lineage4.1.2 | 1 |
lineage2.2.1;lineage4.2.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.4.2 | 1 |
lineage2.1 | 1 |
lineage4.8 | 1 |
lineage2.2;lineage4.2.1 | 1 |
lineage4.3.4.2 | 2 |
lineage3 | 2 |
lineage4.3.3 | 1 |
lineage1.2.2.2 | 1 |
lineage3.1.2;lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 53 |
ID | Drug resistance | Lineage | Country iso2 | ERR3148188 | RR-TB | lineage4.1.2.1 | mx | SRR15014666 | Pre-XDR-TB | lineage1.1.2 | None | SRR14801846 | MDR-TB | lineage4.2.1 | None | SRR25827517 | Pre-XDR-TB | lineage3.1.2;lineage4.2.2.2;lineage4.3.3 | None | SRR10380071 | MDR-TB | lineage4.2.1 | None | SRR3743390 | Pre-XDR-TB | lineage4.2.1 | None | SRR1723524 | MDR-TB | lineage2.2.1 | None | ERR7911094 | MDR-TB | lineage4.2.1 | md | ERR11488627 | MDR-TB | lineage4.1.2 | None | ERR11798656 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR12420268 | MDR-TB | lineage2.2.1 | None | SRR29017672 | Pre-XDR-TB | lineage2.2.1 | None | ERR7910895 | MDR-TB | lineage4.2.1 | md | ERR5917988 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR14801708 | XDR-TB | lineage4.2.1 | None | SRR10040372 | Pre-XDR-TB | lineage4.4.2 | None | ERR11798658 | MDR-TB | lineage4.2.1 | None | SRR13423582 | Pre-XDR-TB | lineage2.1 | None | SRR14801847 | MDR-TB | lineage4.2.1 | None | ERR2510677 | MDR-TB | lineage4.8 | it | SRR28351388 | XDR-TB | lineage4.2.1 | None | SRR1723523 | MDR-TB | lineage2.2.1 | None | SRR23310938 | Pre-XDR-TB | lineage4.2.1 | None | SRR22249997 | MDR-TB | lineage2.2.1 | None | SRR7517723 | MDR-TB | lineage4.2.1 | ch | SRR10380165 | Pre-XDR-TB | lineage4.2.1 | None | SRR3743496 | MDR-TB | lineage2.2;lineage4.2.1 | None | SRR2024981 | MDR-TB | lineage2.2.1 | cn | SRR6824408 | MDR-TB | lineage2.2.1 | cn | ERR2515395 | RR-TB | lineage4.3.4.2 | za | ERR2510476 | RR-TB | lineage3 | pk | SRR28498376 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782320 | Pre-XDR-TB | lineage4.2.1 | None | SRR6797556 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380070 | MDR-TB | lineage4.2.1 | None | ERR7911222 | MDR-TB | lineage4.2.1 | md | ERR11043974 | MDR-TB | lineage2.2.1 | None | ERR9992651 | MDR-TB | lineage4.3.3 | None | SRR15014789 | MDR-TB | lineage1.2.2.2 | None | SRR6807711 | MDR-TB | lineage4.2.1 | None | SRR25827341 | Pre-XDR-TB | lineage3.1.2;lineage4.3.3 | None | SRR29055716 | MDR-TB | lineage4.1.2.1 | None | SRR10380166 | MDR-TB | lineage4.2.1 | None | SRR6896325 | RR-TB | lineage4.3.4.2 | None | ERR11798657 | MDR-TB | lineage4.2.1 | None | SRR25389527 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645941 | Pre-XDR-TB | lineage4.2.1 | None | SAMN03246276 | MDR-TB | lineage2.2.1 | cn | ERR4553729 | MDR-TB | lineage2.2.1 | None | ERR3470547 | MDR-TB | lineage3 | None | SRR21887663 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498481 | Pre-XDR-TB | lineage2.2.1 | None |
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