lineage | Count |
---|---|
lineage2.2.1.1 | 13 |
lineage3 | 21 |
lineage4.3.2 | 1 |
lineage4.1.2.1 | 9 |
lineage4.8 | 4 |
lineage2.2;lineage3 | 1 |
lineage4.1.2 | 1 |
lineage2.2.1 | 10 |
lineage2.2.1;lineage3 | 5 |
1 | |
lineage4.3.4.2 | 6 |
lineage2.2.1.1;lineage4.1.1.1 | 1 |
lineage4.9.1 | 1 |
lineage3.1.1 | 1 |
lineage1.1.2 | 1 |
spoligotype | Count |
---|---|
None | 76 |
ID | Drug resistance | Lineage | Country iso2 | ERR4796442 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796972 | Pre-XDR-TB | lineage2.2.1.1 | in | SAMN02381049 | Pre-XDR-TB | lineage3 | ug | SRR1049734 | Pre-XDR-TB | lineage3 | None | ERR4830754 | Pre-XDR-TB | lineage3 | ir | ERR4798254 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4972489 | MDR-TB | lineage4.3.2 | None | ERR3148177 | Pre-XDR-TB | lineage3 | mx | ERR13261698 | MDR-TB | lineage4.1.2.1 | None | SRR1062932 | Pre-XDR-TB | lineage3 | None | ERR108482 | MDR-TB | lineage4.1.2.1 | ru | ERR3148179 | Pre-XDR-TB | lineage3 | mx | ERR2513872 | Pre-XDR-TB | lineage3 | gb | ERR2516698 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4798330 | XDR-TB | lineage2.2.1.1 | in | SAMN02381042 | Pre-XDR-TB | lineage3 | ug | ERR2864233 | MDR-TB | lineage4.1.2.1 | pt | ERR11081270 | RR-TB | lineage4.8 | None | ERR4814494 | Pre-XDR-TB | lineage3 | gb | SRR1173380 | Pre-XDR-TB | lineage2.2;lineage3 | None | SRR6832647 | Pre-XDR-TB | lineage4.1.2 | None | SRR5067439 | MDR-TB | lineage2.2.1 | vn | SRR1140625 | Pre-XDR-TB | lineage3 | None | SRR1049608 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR4553406 | MDR-TB | None | ERR2510363 | MDR-TB | lineage3 | pk | ERR2513954 | Pre-XDR-TB | lineage3 | gb | SRR1173800 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR1140589 | Pre-XDR-TB | lineage3 | None | ERR4831931 | MDR-TB | lineage2.2.1 | vn | SRR25827354 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1165574 | MDR-TB | lineage4.3.4.2 | None | SRR1162721 | MDR-TB | lineage4.3.4.2 | None | SRR1165523 | MDR-TB | lineage4.3.4.2 | None | ERR13276293 | RR-TB | lineage4.8 | None | ERR4797417 | Pre-XDR-TB | lineage2.2.1.1;lineage4.1.1.1 | in | SRR29289404 | XDR-TB | lineage3 | None | ERR4423629 | Pre-XDR-TB | lineage3 | None | ERR11138635 | MDR-TB | lineage2.2.1 | None | SRR21887658 | MDR-TB | lineage2.2.1 | None | ERR3561992 | MDR-TB | lineage4.3.4.2 | None | SRR5065610 | MDR-TB | lineage2.2.1 | vn | ERR4796776 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR1140575 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SAMN02414951 | MDR-TB | lineage4.3.4.2 | se | ERR4797727 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798204 | RR-TB | lineage4.9.1 | in | SRR1062892 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR1062939 | Pre-XDR-TB | lineage3 | None | ERR4797945 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800059 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR1166712 | MDR-TB | lineage4.3.4.2 | None | ERR13242803 | MDR-TB | lineage2.2.1 | None | SRR22424902 | MDR-TB | lineage3 | None | ERR11081518 | RR-TB | lineage4.8 | None | SRR26937140 | RR-TB | lineage4.1.2.1 | None | SRR1049733 | Pre-XDR-TB | lineage3 | None | SRR6511635 | MDR-TB | lineage4.1.2.1 | None | ERR1034842 | MDR-TB | lineage4.1.2.1 | pt | SRR29385418 | RR-TB | lineage2.2.1 | None | ERR4799657 | XDR-TB | lineage2.2.1.1 | None | SRR1049607 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR29017050 | MDR-TB | lineage3 | None | SRR10040419 | MDR-TB | lineage2.2.1 | None | ERR229932 | MDR-TB | lineage4.1.2.1 | ru | SRR25827594 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR2516405 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4797413 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR10040444 | MDR-TB | lineage2.2.1 | None | ERR13276306 | RR-TB | lineage4.8 | None | SRR10147676 | Pre-XDR-TB | lineage3 | None | ERR4799634 | XDR-TB | lineage2.2.1.1 | in | ERR2245296 | RR-TB | lineage3.1.1 | no | SRR28044854 | MDR-TB | lineage1.1.2 | None | ERR4831866 | MDR-TB | lineage2.2.1 | vn | ERR4821955 | Pre-XDR-TB | lineage3 | None |
---|