lineage | Count |
---|---|
lineage4.3.3 | 37 |
lineage2.2.1 | 6 |
lineage4.1.2.1 | 2 |
lineage1.2.1.2.1 | 2 |
lineage4.9 | 1 |
lineage2.2.1;lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 49 |
ID | Drug resistance | Lineage | Country iso2 | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR1175057 | HR-TB | lineage4.3.3 | None | ERR11138632 | MDR-TB | lineage2.2.1 | None | SRR847775 | Pre-XDR-TB | lineage4.3.3 | za | SRR10869188 | Pre-XDR-TB | lineage4.3.3 | None | ERR5866492 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR16156718 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011483 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586022 | MDR-TB | lineage4.3.3 | za | SRR16156731 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR13266911 | MDR-TB | lineage2.2.1 | None | ERR9125281 | MDR-TB | lineage1.2.1.2.1 | None | ERR2516069 | MDR-TB | lineage4.3.3 | za | SRR9971170 | MDR-TB | lineage4.3.3 | None | ERR7911073 | Pre-XDR-TB | lineage4.3.3 | za | ERR5987411 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140955 | Pre-XDR-TB | lineage4.3.3 | None | SRR16058383 | MDR-TB | lineage1.2.1.2.1 | None | SRR1184304 | MDR-TB | lineage4.3.3 | None | ERR5866491 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR10040446 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02585987 | MDR-TB | lineage4.3.3 | za | SRR16156743 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993220 | Pre-XDR-TB | lineage4.9 | None | SRR9971374 | Pre-XDR-TB | lineage4.3.3 | None | ERR11138621 | MDR-TB | lineage2.2.1 | None | SAMN02350486 | Pre-XDR-TB | lineage4.3.3 | za | SRR1172858 | MDR-TB | lineage4.3.3 | None | SRR1196670 | MDR-TB | lineage4.3.3 | None | ERR9120006 | MDR-TB | lineage4.3.3 | None | SRR16156695 | Pre-XDR-TB | lineage4.3.3 | None | ERR5987340 | MDR-TB | lineage4.3.3 | None | SRR10315458 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR16156753 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196587 | MDR-TB | lineage4.3.3 | None | SRR1062854 | Pre-XDR-TB | lineage4.3.3 | None | SRR16156723 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350440 | Pre-XDR-TB | lineage4.3.3 | za | SRR1184389 | MDR-TB | lineage4.3.3 | None | SRR1019162 | Pre-XDR-TB | lineage4.3.3 | None | ERR11138627 | MDR-TB | lineage2.2.1 | None | ERR4811278 | RR-TB | lineage2.2.1 | cn | ERR9119877 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172843 | MDR-TB | lineage4.3.3 | None | ERR9120007 | MDR-TB | lineage4.3.3 | None | ERR2515286 | Pre-XDR-TB | lineage4.3.3 | za | SRR924224 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925657 | Pre-XDR-TB | lineage4.3.3 | None |
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