Rv0668 - c.-276G>C
Drug resistance types
110 Sensitive
39 RR-TB
87 HR-TB
22 MDR-TB
20 Pre-XDR-TB
1 XDR-TB
114 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.3.3 | 6 |
| lineage2.2.1 | 25 |
| lineage3 | 18 |
| lineage4.1.1.3 | 2 |
| lineage4 | 77 |
| lineage5.1.1 | 1 |
| 73 | |
| lineage4.7 | 2 |
| lineage4.6.1.1 | 3 |
| La1.2 | 3 |
| lineage4.3.4.2.1 | 5 |
| lineage4.9 | 107 |
| lineage4.3.4 | 1 |
| lineage4.2.1 | 4 |
| lineage4.1.2.1 | 12 |
| lineage5.1.2 | 1 |
| lineage4.9;La1.3 | 2 |
| lineage2.2 | 6 |
| lineage2.2.1.2 | 3 |
| lineage3.1.2.1 | 3 |
| lineage4.5 | 2 |
| lineage4.6.5 | 2 |
| lineage3.1.3 | 1 |
| lineage6 | 1 |
| lineage3.1.1 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.8 | 5 |
| lineage4.4.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.4 | 1 |
| lineage4.4 | 1 |
| lineage2.2.2 | 2 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1 | 2 |
| lineage2.1 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage1.1.2 | 2 |
| lineage5.1.4 | 1 |
| lineage4.3.2.1 | 2 |
| La1.8.1 | 1 |
| lineage1.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 393 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831745 | MDR-TB | lineage2.2.1.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR502943 | HR-TB | None | ERR502889 | Other | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7851312 | Other | La1.2 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR067681 | HR-TB | None | ERR017781 | Other | lineage3 | None | ERR027293 | Other | None | ERR036207 | Other | lineage4.9 | None | ERR1023525 | HR-TB | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283024 | Other | None | ERR3283055 | HR-TB | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10796569 | Other | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR3797061 | Other | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797024 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797044 | Other | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797081 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR403298 | HR-TB | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4798406 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798431 | HR-TB | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR6197032 | Other | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6197031 | Other | lineage4.7 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR736837 | Other | lineage4.9 | None | ERR736839 | Other | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9787336 | Other | lineage6 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1049672 | Other | lineage3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR10809087 | Sensitive | lineage4.4.1.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173310 | MDR-TB | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180440 | Other | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR13837443 | Sensitive | lineage4.9 | None | SRR13837507 | HR-TB | lineage4.9 | None | SRR13837619 | Sensitive | lineage4.9 | None | SRR13837646 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR158583 | HR-TB | None | SRR22424765 | MDR-TB | lineage4 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR4815296 | Sensitive | lineage4 | None | SRR3675502 | Other | None | SRR3675488 | HR-TB | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675501 | HR-TB | None | ERR3275450 | Other | lineage4 | None | SRR3675222 | Other | None | ERR4814976 | Other | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675279 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | ERR1750907 | RR-TB | None | SRR3675234 | Other | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | ERR4816417 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | ERR4816192 | Sensitive | lineage3 | None | SRR3675550 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212034 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675510 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675542 | Other | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4817204 | RR-TB | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR4816470 | Other | lineage3 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR2228890 | Other | lineage4 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2513259 | Other | lineage3 | None | ERR4817998 | Other | lineage3 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4818285 | HR-TB | lineage4.1.2.1 | None | ERR1035162 | Other | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818929 | HR-TB | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819793 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341456 | Other | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341418 | Other | None | ERR4819910 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR1023509 | Other | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820030 | Other | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517475 | Other | lineage4 | None | ERR2693231 | Other | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR2693230 | Other | None | SRR5431730 | Other | La1.8.1 | None | SRR6045519 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045503 | HR-TB | None | SRR5535933 | HR-TB | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821276 | Other | lineage3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR6045217 | Other | lineage4 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045053 | Other | None | SRR6045124 | Other | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046046 | Other | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6045399 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046460 | HR-TB | None | ERR4830353 | Other | None | SRR6046482 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | SRR6046492 | Other | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046824 | HR-TB | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR4831719 | MDR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | ERR4831716 | HR-TB | lineage1.1.1.1 | None |
|---|
