Rv0668 - c.-408C>T
Drug resistance types
182 Sensitive
102 RR-TB
117 HR-TB
55 MDR-TB
25 Pre-XDR-TB
1 XDR-TB
207 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 47 |
| 84 | |
| La2 | 1 |
| lineage4 | 124 |
| lineage5.1.1 | 3 |
| lineage4.9 | 198 |
| lineage4.7 | 2 |
| lineage3 | 23 |
| lineage4.6.1.2 | 6 |
| lineage4.1.2 | 4 |
| lineage4.1.2.1 | 16 |
| lineage4.6.1.1 | 4 |
| lineage4.8 | 18 |
| lineage4.3.2.1 | 3 |
| lineage4.3.3 | 8 |
| lineage1.1.1.1 | 2 |
| lineage4.4.1.2 | 2 |
| lineage4.1.1.3 | 7 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.3.4 | 2 |
| La1.7.X-unk4 | 1 |
| La1.8.1 | 8 |
| lineage6.1.1 | 2 |
| lineage6 | 2 |
| lineage5.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 2 |
| lineage1.2.2.2 | 1 |
| lineage1.1.2 | 7 |
| lineage3.1.2 | 1 |
| lineage2.2.2 | 2 |
| lineage4.5 | 3 |
| lineage1.2.1.2 | 3 |
| lineage2.2 | 8 |
| lineage5.2 | 2 |
| lineage1.1.3.1 | 3 |
| lineage4.6.2.2 | 4 |
| lineage3.1.1 | 2 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage6.1.3 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.6.1 | 5 |
| lineage4.4.1.1.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 6 |
| lineage4.3.4.1 | 1 |
| lineage4.4.2 | 4 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage3.1.3 | 2 |
| La1.7.1 | 2 |
| lineage4.1 | 3 |
| lineage4;lineage2.2 | 2 |
| lineage1.2.2 | 1 |
| lineage4.3.4.2.1 | 8 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage2.1 | 2 |
| lineage1.2.1.1 | 2 |
| lineage4.3 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage4.2 | 1 |
| lineage4.1.1 | 1 |
| lineage3.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.2.1 | 4 |
| lineage4.4.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.8.2 | 1 |
| lineage1.1.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.4.2;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 689 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6855978 | HR-TB | lineage2.2.1 | None | SRR6982365 | Other | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502510 | Sensitive | lineage4 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR502943 | HR-TB | None | ERR3275190 | Other | lineage3 | nl | SRR7496471 | Sensitive | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535053 | Sensitive | lineage3 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | SRR7535073 | Sensitive | lineage4.6.1.1 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7535080 | HR-TB | lineage4.8 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR7535086 | Other | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR323039 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR323085 | Sensitive | lineage4 | None | ERR036207 | Other | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063896 | Sensitive | None | ERR1035122 | Sensitive | None | ERR1063855 | Other | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796569 | Other | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796634 | Other | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR3283008 | Other | lineage4.9 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3445504 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3468578 | Other | La1.8.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797060 | Other | La1.8.1 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR3803778 | Other | lineage6 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4024991 | Other | None | ERR400345 | Other | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR405209 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4627377 | Other | La1.8.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4797264 | Sensitive | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4797474 | Other | None | ERR4798504 | Other | lineage3 | None | ERR4798099 | Other | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4798431 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR6358979 | Other | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR4811030 | Sensitive | None | ERR6336752 | HR-TB | lineage1.2.1.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358991 | HR-TB | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR6866410 | Sensitive | None | ERR702404 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736865 | HR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR751338 | Other | lineage5.1.1 | None | ERR751326 | Sensitive | lineage4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786843 | Other | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9787336 | Other | lineage6 | None | ERR9896144 | Other | lineage3 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR990545 | Other | lineage3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049744 | Sensitive | lineage4.6.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049743 | Sensitive | lineage4.6.1 | None | SRR1062937 | HR-TB | lineage4.6.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1165306 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR11462861 | Other | La1.8.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140627 | Other | lineage4.6.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1169306 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1173777 | Other | lineage4 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13861138 | RR-TB | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13837443 | Sensitive | lineage4.9 | None | SRR13837646 | Sensitive | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861162 | Other | lineage4.9 | None | SRR13861170 | RR-TB | lineage4.9 | None | SRR13861178 | RR-TB | lineage4.9 | None | SRR13861182 | RR-TB | lineage4.9 | None | SRR13861199 | RR-TB | lineage4.9 | None | SRR13861207 | Other | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861233 | RR-TB | lineage4.9 | None | SRR13861277 | RR-TB | lineage4.9 | None | SRR13861282 | RR-TB | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861283 | Other | lineage4.9 | None | SRR13861310 | RR-TB | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861351 | Other | lineage4.9 | None | SRR13861346 | RR-TB | lineage4.9 | None | SRR13861344 | RR-TB | lineage4.9 | None | SRR13861357 | RR-TB | lineage4.9 | None | SRR13861353 | Other | lineage4.9 | None | SRR13861378 | RR-TB | lineage4.9 | None | SRR13861385 | Sensitive | lineage4.9 | None | SRR13861440 | RR-TB | lineage4.9 | None | SRR13861402 | Other | lineage4.9 | None | SRR13861393 | Sensitive | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861437 | RR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861462 | Other | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861458 | MDR-TB | lineage4.9 | None | SRR13861488 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861508 | RR-TB | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861513 | RR-TB | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861542 | RR-TB | lineage4.9 | None | SRR13861545 | Other | lineage4.9 | None | SRR13861563 | RR-TB | lineage4.9 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR13861561 | RR-TB | lineage4.9 | None | SRR13861676 | Sensitive | lineage4.9 | None | SRR13861590 | RR-TB | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861713 | RR-TB | lineage4.9 | None | SRR13861695 | RR-TB | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR13861735 | MDR-TB | lineage4.9 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR14801749 | Sensitive | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR16295733 | Sensitive | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR17658565 | Other | lineage3 | None | SRR1792022 | Other | La1.8.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR16295734 | Other | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR21469201 | Other | La1.7.1 | None | SRR8692893 | Other | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR8692885 | Other | lineage4.9 | None | SRR21469200 | Other | La1.7.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692791 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692825 | Other | lineage4.9 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | SRR8692887 | Other | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | SRR3675477 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4815310 | Other | None | SRR3675488 | HR-TB | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4814700 | Other | lineage4.3.3 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675501 | HR-TB | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR3675222 | Other | None | ERR3275450 | Other | lineage4 | None | SRR3675230 | RR-TB | lineage3 | None | SRR3675229 | Other | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR1750907 | RR-TB | None | ERR1750921 | Sensitive | lineage4.1.1.3 | None | SRR3675249 | Sensitive | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675279 | Other | None | ERR4815550 | Other | lineage4 | None | ERR4814976 | Other | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR176740 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR3675387 | Sensitive | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR176751 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | SRR3675510 | Other | None | ERR1949992 | Other | lineage4.8 | None | ERR4815956 | Other | lineage1.1.2 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816009 | Other | lineage1.1.2 | None | SRR3675522 | Other | None | SRR3675542 | Other | lineage4.9 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR4816043 | Other | lineage4.2 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR212001 | HR-TB | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR212033 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | None | ERR4817060 | RR-TB | None | ERR2446509 | Other | lineage3 | nl | SRR3675571 | HR-TB | None | ERR4817131 | Pre-XDR-TB | None | ERR4816531 | Other | lineage4.1.2 | None | ERR2229233 | Sensitive | lineage4 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR1034791 | RR-TB | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR216965 | HR-TB | lineage4.9 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR4816852 | Other | lineage4.9 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4816738 | Sensitive | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4815815 | Sensitive | lineage4 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR2229519 | Sensitive | lineage4.8 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4817958 | Other | lineage4.2.1 | None | ERR4818663 | Other | lineage3 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4817998 | Other | lineage3 | None | ERR4819017 | RR-TB | lineage3 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245758 | Other | lineage4.9.1 | None | ERR2432997 | Other | lineage4.8 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4818929 | HR-TB | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818904 | Other | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4818536 | Other | lineage4.9 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5341396 | Other | lineage4 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5341453 | Sensitive | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4819119 | HR-TB | lineage1.2.1.2.1 | gb | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341387 | Other | lineage4 | None | ERR4819307 | RR-TB | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341425 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341456 | Other | None | ERR4819720 | Other | lineage3.1.2.1 | gb | ERR4820324 | Other | lineage4 | None | ERR4819456 | Other | lineage4.8 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819462 | Other | lineage4 | None | ERR4819476 | Sensitive | lineage4.3.2 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820394 | Other | lineage4.3.4.2.1 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | SRR5341455 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4819910 | Other | lineage4.9 | None | ERR1023509 | Other | None | ERR4820820 | Other | lineage1.2.1.1 | gb | ERR4820833 | HR-TB | None | ERR4820827 | Other | lineage4.1.2 | None | SRR5341323 | Sensitive | lineage4 | None | ERR2446382 | Other | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR4820679 | Other | lineage4.8 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515228 | Other | lineage2.2.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | ERR4820967 | HR-TB | None | SRR5341470 | HR-TB | None | ERR2517475 | Other | lineage4 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045450 | Other | lineage4.9 | None | ERR4821057 | HR-TB | lineage4 | None | SAMN02381047 | Sensitive | lineage4.6.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045503 | HR-TB | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821276 | Other | lineage3 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821572 | Other | lineage2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045555 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6046151 | Sensitive | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044780 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6046210 | Other | lineage4 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045263 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045399 | Other | None | SRR6045320 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046376 | Other | lineage3 | None | SRR6046397 | Other | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4829606 | Sensitive | lineage4.1.2.1 | None | ERR4830353 | Other | None | SRR6046737 | Other | lineage4.9 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831792 | MDR-TB | lineage4;lineage2.2 | None | ERR4831638 | Sensitive | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831718 | MDR-TB | lineage2.2.1 | vn | ERR4831724 | HR-TB | lineage2.2 | None | ERR4831755 | HR-TB | lineage2.2.1 | vn | ERR4831841 | HR-TB | lineage4.4.2;lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6982246 | Sensitive | lineage4 | None |
|---|
