Rv0668 - c.-411G>C


Drug resistance types
174 Sensitive 23 RR-TB 50 HR-TB 35 MDR-TB 19 Pre-XDR-TB 1 XDR-TB 104 Other
lineage Counts
lineage Count
lineage4.2.1 3
lineage4.9 121
lineage4 103
lineage4.1.2.1 11
lineage4.3.4.2.1 6
lineage2.2.1 28
47
lineage4.3.2.1 3
lineage3 9
lineage2.2.1.1 2
lineage2.1 2
lineage2.2 2
lineage4.1 2
lineage4;lineage2.2 2
lineage4.4.2;lineage2.2.1 1
lineage4.1.2 2
lineage4.7 2
lineage4.8 7
lineage4.3.3 3
lineage4.4.1.2 1
lineage4.8.1 1
lineage4.3.4.1;La1.7 1
lineage6.2.3;lineage1.1.2 1
lineage5.1.2 1
La1.2 1
lineage4;lineage3.1 1
La1.3 2
lineage4.9;La1.3 1
lineage2.2.1.2 1
lineage4.5 2
lineage1.1.1.1 1
lineage1.1.3.1 1
lineage4.1.1.3 4
lineage3.1.1 2
lineage4.3.4.2 1
lineage6.1.3 1
lineage6 1
lineage4.8;lineage4.3.3 4
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage4.4.1.1.1 2
lineage4.9;lineage2.2 1
lineage2 1
La1.8.1 2
La1.7.1 2
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage1.2.1.1 1
lineage4.1.3;lineage4.1.2.1;lineage1.1.2 1
lineage4.1.1 1
lineage2.2.2 1
lineage1.1.2 2
lineage3.1.3 1
lineage4.1.1.2 1
lineage5.1.4 1
lineage1.1.1 1
lineage4.9;lineage2.1 1
spoligotype Counts
spoligotype Count
None 406
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045664 Other lineage4.2.1 None
ERR4821172 RR-TB lineage4.9 None
ERR4821655 Sensitive lineage4 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045706 Sensitive lineage4 None
SRR6046141 Other lineage4.9 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6044875 HR-TB lineage4.9 None
SRR6044835 Sensitive lineage4 None
SRR6045832 HR-TB lineage4.9 None
SRR6045892 Sensitive None
SRR6044819 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6044925 Sensitive lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045320 Other lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6045263 Sensitive lineage4.9 None
SRR6046376 Other lineage3 None
SRR6046259 Sensitive lineage4.9 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046210 Other lineage4 None
SRR6046245 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR4830353 Other None
SRR6046611 HR-TB lineage4.9 None
SRR6046737 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
SRR6046802 Other lineage4 None
SRR6046839 Other lineage4.9 None
SRR6046897 Sensitive lineage4 None
SRR6511621 HR-TB None
ERR502470 RR-TB lineage4.9 None
ERR4832002 Pre-XDR-TB lineage2.1 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831638 Sensitive None
ERR4831724 HR-TB lineage2.2 None
SRR6789624 MDR-TB lineage4.1 None
ERR4831792 MDR-TB lineage4;lineage2.2 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR4831841 HR-TB lineage4.4.2;lineage2.2.1 None
SRR9970980 Other lineage4.1.2 None
ERR502943 HR-TB None
SRR9971270 RR-TB lineage2.2.1 None
SRR7496523 Other lineage4.7 None
ERR502510 Sensitive lineage4 None
SRR7496471 Sensitive None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9970979 Sensitive lineage4.8 None
SRR7535082 Sensitive lineage4 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971114 Other lineage2.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR9971113 Other lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR323066 Sensitive lineage4 None
ERR323085 Sensitive lineage4 None
ERR1063883 Sensitive lineage4 None
ERR036207 Other lineage4.9 None
ERR037234 Sensitive lineage4.9 None
ERR1035122 Sensitive None
ERR1063855 Other lineage4 None
ERR11465802 Other lineage4.3.4.1;La1.7 None
ERR1063896 Sensitive None
ERR137286 Sensitive lineage4 None
ERR10796569 Other lineage4.9 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR108471 HR-TB lineage4 None
ERR323115 Sensitive lineage4 None
ERR3283014 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283008 Other lineage4.9 None
ERR3283047 HR-TB None
ERR3283043 Other lineage4.9 None
ERR3283021 HR-TB None
ERR3283028 Other None
ERR3283031 HR-TB None
ERR3283046 MDR-TB lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR349265 Sensitive lineage4 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR349264 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363456 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369163 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR3797048 HR-TB None
ERR373947 Sensitive lineage4 None
ERR3797047 HR-TB lineage4 None
ERR400326 Sensitive lineage4 None
ERR3797087 Sensitive lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400320 Sensitive lineage4 None
ERR3797065 MDR-TB lineage4 None
ERR3797063 HR-TB None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR400336 Sensitive lineage4 None
ERR400538 RR-TB lineage5.1.2 None
ERR400345 Other lineage4 None
ERR405209 Sensitive lineage4 None
ERR4024991 Other None
ERR4769418 Other La1.2 None
ERR4596910 Sensitive lineage4 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4178226 Sensitive lineage4 None
ERR4178309 Other lineage4.1.2.1 None
ERR4188247 HR-TB None
ERR473323 HR-TB lineage4.9 None
ERR4769408 Other La1.3 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769553 RR-TB lineage4.9 None
ERR4769514 Other La1.3 None
ERR4769444 HR-TB lineage4.9 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4797350 Sensitive lineage4.9 None
ERR4796254 Sensitive lineage4 None
ERR4796577 MDR-TB None
ERR4797184 Sensitive lineage4 None
ERR4797313 HR-TB None
ERR4797264 Sensitive None
ERR6358979 Other None
ERR4798431 HR-TB None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4811030 Sensitive None
ERR4812155 Sensitive None
ERR4797474 Other None
ERR4798099 Other None
ERR4799378 Sensitive lineage4 None
ERR4811031 Sensitive lineage4.5 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6358991 HR-TB None
ERR6359069 Other lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6865502 Sensitive lineage4 None
ERR6359074 HR-TB lineage4.9 None
ERR6866022 Other None
ERR6865513 Other lineage4.1.2.1 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6866410 Sensitive None
ERR6866639 Other None
ERR736834 Sensitive lineage4 None
ERR736848 HR-TB None
ERR736856 HR-TB lineage4 None
ERR736872 Sensitive lineage4 None
ERR736837 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR212114 Other lineage4.3.4.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR9285979 RR-TB lineage3.1.1 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9787256 Other lineage6.1.3 None
SRR10315551 Sensitive lineage2.2.1 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR9787336 Other lineage6 None
ERR987707 MDR-TB lineage4.7 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR10315567 Other lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR10808399 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR10808668 Sensitive lineage2.2.1 None
SRR10993951 RR-TB La1.6 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR1158918 Sensitive lineage4 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1165306 Pre-XDR-TB lineage4.1.1.3 None
SRR1172717 Other lineage4.9 None
SRR1167271 MDR-TB lineage4.1.1.3 None
SRR1172885 HR-TB lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1173777 Other lineage4 None
SRR1173568 Other lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1175472 MDR-TB lineage4 None
SRR1175506 Sensitive lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1175512 Sensitive lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1175508 Other lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180977 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1180996 HR-TB lineage4 None
SRR1181237 Sensitive lineage2.2 None
SRR1181214 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181402 Sensitive lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR1183965 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR14801749 Sensitive None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR1791747 Other La1.8.1 None
SRR16157123 Other lineage4.9 None
SRR15315797 RR-TB lineage2.2.1 None
SRR16156804 RR-TB lineage4.9 None
SRR1792022 Other La1.8.1 None
SRR19295647 Sensitive lineage4.9 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4 None
SRR21469201 Other La1.7.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR21677886 Sensitive lineage4.9 None
SRR21469200 Other La1.7.1 None
SRR8692885 Other lineage4.9 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR12708416 Sensitive lineage4.1 None
SRR8692893 Other lineage4.9 None
SRR8692782 Other lineage4.9 None
SRR3675477 Other lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692825 Other lineage4.9 None
SRR8692791 Other lineage4.9 None
SRR8692887 Other None
SRR3675473 Sensitive lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
SRR8692863 Other lineage4;lineage2.2 None
SRR3675455 Sensitive lineage4 None
ERR4815310 Other None
SRR3675488 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675209 Sensitive lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4814690 Sensitive lineage2.2.1 None
ERR4815471 Other lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
SRR3675222 Other None
SRR3675501 HR-TB None
ERR4814734 Other lineage1.2.1.1 None
ERR3275450 Other lineage4 None
SRR3675229 Other lineage4 None
ERR1750921 Sensitive lineage4.1.1.3 None
ERR702405 Sensitive lineage2.1 None
SRR3675266 Sensitive lineage4.9 None
SRR3675246 Sensitive lineage4 None
SRR3675249 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675265 Other lineage4 None
ERR4813263 MDR-TB lineage4.8 None
SRR3675279 Other None
SRR3675387 Sensitive None
ERR4815550 Other lineage4 None
SRR3675318 Other lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
SRR3675292 Sensitive lineage4 None
ERR176751 HR-TB None
ERR4816964 Other lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR3675542 Other lineage4.9 None
SRR3675527 RR-TB lineage4.9 None
SRR3675522 Other None
SRR3675547 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR4816100 Sensitive lineage4.1.3;lineage4.1.2.1;lineage1.1.2 None
SRR3675577 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1 None
SRR3675553 Sensitive lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
ERR2229233 Sensitive lineage4 None
ERR4816470 Other lineage3 None
ERR212121 HR-TB None
ERR2229198 MDR-TB lineage4.8 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4816729 Sensitive lineage4.9 None
ERR4816738 Sensitive lineage4.9 None
ERR4816548 MDR-TB lineage4.5 None
ERR2229234 RR-TB lineage4.8 None
ERR216965 HR-TB lineage4.9 None
SRR5341384 Sensitive lineage4.9 None
ERR4817204 RR-TB lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR4033549 HR-TB lineage2.2.2 None
ERR245675 Sensitive lineage1.1.2 None
ERR4817998 Other lineage3 None
ERR2513121 Sensitive lineage3.1.3 None
ERR3275190 Other lineage3 nl
ERR2513438 Sensitive lineage4.1.2.1 None
ERR4818252 Other lineage4.1.1.2 None
ERR2513283 Other lineage5.1.4 None
ERR2513259 Other lineage3 None
ERR3275709 HR-TB lineage3 nl
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818904 Other lineage4.8 None
ERR2512770 Other lineage4.2.1 None
SRR5341453 Sensitive None
ERR4817554 Other lineage1.1.1 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR5341387 Other lineage4 None
ERR4819357 Other lineage4.9 None
SRR5341396 Other lineage4 None
SRR5341296 Sensitive lineage4.9 None
SRR5341425 Other lineage4 None
SRR5341437 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4 None
ERR2514552 Sensitive lineage3 None
SRR5341300 Other lineage4 None
SRR5341298 Sensitive lineage4 None
ERR4819910 Other lineage4.9 None
SRR5341299 Sensitive lineage4 None
ERR4819863 RR-TB lineage4.9 None
SRR5341303 RR-TB lineage4 None
SRR5341308 Sensitive lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR1023509 Other None
ERR2446382 Other lineage4 None
SRR5341310 Other lineage1.1.2 None
SRR5341323 Sensitive lineage4 None
ERR4820043 Sensitive lineage4.1.2.1 None
SRR5341345 Sensitive lineage4.9 None
ERR4819933 Other lineage4.9 None
SRR5341461 Sensitive lineage4 None
SRR5341467 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR2517475 Other lineage4 None
SRR6045503 HR-TB None
SRR5341366 Sensitive lineage4 None
SRR5341469 Other lineage4 None
ERR2446509 Other lineage3 nl
ERR4821057 HR-TB lineage4 None
ERR502511 Sensitive lineage4.9;lineage2.1 None