ERR4769508
|
RR-TB
|
lineage4.9
|
None
|
ERR4769514
|
Other
|
La1.3
|
None
|
ERR4769530
|
RR-TB
|
lineage4.9
|
None
|
ERR4769553
|
RR-TB
|
lineage4.9
|
None
|
ERR4796472
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4797350
|
Sensitive
|
lineage4.9
|
None
|
ERR4797313
|
HR-TB
|
|
None
|
ERR4798431
|
HR-TB
|
|
None
|
ERR4812155
|
Sensitive
|
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
ERR4811030
|
Sensitive
|
|
None
|
ERR4799547
|
Sensitive
|
lineage2.2.1
|
None
|
ERR5987249
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR6359070
|
Other
|
lineage4.9
|
None
|
ERR5987263
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6358951
|
HR-TB
|
lineage4
|
None
|
ERR6359066
|
HR-TB
|
lineage4
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
ERR6359069
|
Other
|
lineage4.9
|
None
|
ERR6865513
|
Other
|
lineage4.1.2.1
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
ERR751317
|
Sensitive
|
lineage4.9
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR736831
|
HR-TB
|
lineage4.9
|
None
|
ERR736837
|
Other
|
lineage4.9
|
None
|
ERR736848
|
HR-TB
|
|
None
|
ERR751330
|
MDR-TB
|
lineage5.1.1
|
None
|
ERR9119733
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR752012
|
HR-TB
|
lineage1.1.1.1
|
None
|
ERR773806
|
Sensitive
|
lineage2.2.1
|
None
|
ERR751338
|
Other
|
lineage5.1.1
|
None
|
ERR9786076
|
Sensitive
|
lineage3
|
None
|
ERR9120013
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR9120012
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR9787336
|
Other
|
lineage6
|
None
|
ERR9786911
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR987707
|
MDR-TB
|
lineage4.7
|
None
|
SRR1013527
|
RR-TB
|
lineage2.2
|
None
|
ERR9992879
|
XDR-TB
|
lineage4.3.3
|
None
|
SRR1013531
|
MDR-TB
|
lineage4.9
|
None
|
SRR1013528
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1013553
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1013568
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1013554
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1013565
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR1013566
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR1013578
|
MDR-TB
|
lineage2.2
|
None
|
SRR1013569
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1013567
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1013570
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1013577
|
MDR-TB
|
lineage2.2
|
None
|
SRR1013583
|
HR-TB
|
lineage2.2
|
None
|
SRR1013581
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1013590
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1013582
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1013589
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1013584
|
HR-TB
|
lineage2.2
|
None
|
SRR1013597
|
HR-TB
|
lineage2.2
|
None
|
SRR1013596
|
HR-TB
|
lineage3
|
None
|
SRR1013595
|
HR-TB
|
lineage3
|
None
|
SRR1013607
|
HR-TB
|
lineage2.2
|
None
|
SRR1013599
|
HR-TB
|
|
None
|
SRR1013601
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1013598
|
HR-TB
|
|
None
|
SRR1013600
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR1013602
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1013604
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1013603
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1013609
|
HR-TB
|
lineage4
|
None
|
SRR1013608
|
HR-TB
|
lineage2.2
|
None
|
SRR1013611
|
HR-TB
|
lineage4
|
None
|
SRR1013610
|
HR-TB
|
lineage4
|
None
|
SRR1013614
|
HR-TB
|
lineage2.2
|
None
|
SRR1013613
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1013618
|
MDR-TB
|
|
None
|
SRR1013617
|
MDR-TB
|
|
None
|
SRR1013621
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1013612
|
HR-TB
|
lineage4
|
None
|
SRR1013622
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1013629
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1047996
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1013633
|
MDR-TB
|
lineage2.2
|
None
|
SRR10315558
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
SRR1047993
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1013630
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1013634
|
MDR-TB
|
lineage2.2
|
None
|
SRR1048852
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR1048867
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1048853
|
Pre-XDR-TB
|
lineage4;lineage2.2.2
|
None
|
SRR1048866
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR1048865
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR1048885
|
MDR-TB
|
|
None
|
SRR1048869
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1048868
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1048870
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1048966
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1048965
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1048886
|
MDR-TB
|
lineage2.2
|
None
|
SRR1048988
|
HR-TB
|
lineage2.2
|
None
|
SRR1048968
|
HR-TB
|
lineage2.2.2;lineage2.2.1
|
None
|
SRR1048974
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1048980
|
HR-TB
|
lineage3
|
None
|
SRR1048983
|
HR-TB
|
|
None
|
SRR1048986
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1048969
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1048975
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1048982
|
HR-TB
|
|
None
|
SRR1048985
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1048994
|
HR-TB
|
lineage4.9
|
None
|
SRR1048987
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1048992
|
HR-TB
|
lineage2.2.2
|
None
|
SRR1048991
|
HR-TB
|
lineage2.2.2
|
None
|
SRR1048993
|
HR-TB
|
lineage4.9
|
None
|
SRR1048996
|
HR-TB
|
lineage4.5
|
None
|
SRR1048995
|
HR-TB
|
lineage4.5
|
None
|
SRR1048998
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1048997
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1049006
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1049005
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1049004
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1049023
|
HR-TB
|
lineage2.2
|
None
|
SRR1049007
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1049022
|
HR-TB
|
lineage4.9;lineage2
|
None
|
SRR1049040
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1049027
|
Pre-XDR-TB
|
|
None
|
SRR1049026
|
Pre-XDR-TB
|
|
None
|
SRR1049560
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1049041
|
MDR-TB
|
|
None
|
SRR1049559
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1049623
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1049581
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1049582
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1049723
|
MDR-TB
|
lineage4.6.1
|
None
|
SRR1049622
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1049672
|
Other
|
lineage3
|
None
|
SRR1049673
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR1049725
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1049724
|
MDR-TB
|
lineage4.6.1
|
None
|
SRR1049744
|
Sensitive
|
lineage4.6.1
|
None
|
SRR1049726
|
MDR-TB
|
lineage4.4.1.1;lineage4.1.2.1
|
None
|
SRR1049752
|
RR-TB
|
lineage4.6.1.2
|
None
|
SRR1049751
|
RR-TB
|
lineage4.6.1.2
|
None
|
SRR1049743
|
Sensitive
|
lineage4.6.1
|
None
|
SRR1062868
|
HR-TB
|
lineage4.9
|
None
|
SRR1062865
|
HR-TB
|
lineage2.2.2
|
None
|
SRR1062864
|
Sensitive
|
lineage4.9;lineage2.2.1
|
None
|
SRR1062880
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1062867
|
RR-TB
|
lineage4.9;lineage2.2.1
|
None
|
SRR1062871
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1062902
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1062895
|
Other
|
lineage4.6.1.1
|
None
|
SRR1062897
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR11342667
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1062927
|
MDR-TB
|
lineage4.6.1
|
None
|
SRR1062937
|
HR-TB
|
lineage4.6.1
|
None
|
SRR10869071
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10993951
|
RR-TB
|
La1.6
|
None
|
SRR1106670
|
Other
|
lineage4.9
|
None
|
SRR1062918
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR1062928
|
RR-TB
|
lineage4
|
None
|
SRR1062933
|
Sensitive
|
lineage4.9
|
None
|
SRR1062941
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR11349133
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR11349186
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1140586
|
HR-TB
|
lineage4.9
|
None
|
SRR1140627
|
Other
|
lineage4.6.1
|
None
|
SRR1140712
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1140740
|
RR-TB
|
lineage4.6.1.2
|
None
|
SRR1140723
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1140736
|
RR-TB
|
|
None
|
SRR1140716
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR1144759
|
MDR-TB
|
lineage2.2
|
None
|
SRR1140753
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1141261
|
MDR-TB
|
lineage4.9
|
None
|
SRR1144744
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1173014
|
MDR-TB
|
lineage3
|
None
|
SRR1169591
|
Sensitive
|
lineage1.1.2
|
None
|
SRR1172717
|
Other
|
lineage4.9
|
None
|
SRR1172807
|
Sensitive
|
lineage4.9
|
None
|
SRR1172840
|
Sensitive
|
lineage1.1.2
|
None
|
SRR1172848
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR1172873
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR1172885
|
HR-TB
|
lineage4.9
|
None
|
SRR1144809
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1172066
|
Sensitive
|
lineage4.9
|
None
|
SRR1172938
|
MDR-TB
|
lineage3
|
None
|
SRR1173170
|
Other
|
lineage4.9
|
None
|
SRR1173183
|
Sensitive
|
lineage1.1.2
|
None
|
SRR1173385
|
Sensitive
|
lineage4.9
|
None
|
SRR1173185
|
HR-TB
|
lineage4.9
|
None
|
SRR1173281
|
RR-TB
|
lineage3
|
None
|
SRR1173335
|
Sensitive
|
lineage4.9
|
None
|
SRR1173416
|
Other
|
lineage4.9
|
None
|
SRR1173450
|
RR-TB
|
lineage4.9
|
None
|
SRR1173445
|
Sensitive
|
lineage3
|
None
|
SRR1173687
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1173565
|
MDR-TB
|
lineage4.6.1;lineage3.1
|
None
|
SRR1173686
|
MDR-TB
|
lineage3
|
None
|
SRR1173515
|
HR-TB
|
lineage4.9
|
None
|
SRR1173621
|
MDR-TB
|
lineage3
|
None
|
SRR1173656
|
Sensitive
|
lineage1.1.2
|
None
|
SRR1173770
|
Other
|
lineage4.9
|
None
|
SRR1173740
|
Other
|
|
None
|
SRR1173720
|
Other
|
lineage4.9
|
None
|
SRR1173727
|
MDR-TB
|
lineage3
|
None
|
SRR1175132
|
HR-TB
|
lineage3
|
None
|
SRR1175052
|
HR-TB
|
lineage4.9
|
None
|
SRR1173832
|
MDR-TB
|
lineage4.6.1;lineage3.1
|
None
|
SRR1175096
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1175165
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1175151
|
MDR-TB
|
lineage3
|
None
|
SRR1175491
|
MDR-TB
|
lineage4
|
None
|
SRR1175473
|
Other
|
lineage4.9
|
None
|
SRR1175474
|
HR-TB
|
lineage4.9
|
None
|
SRR1175472
|
MDR-TB
|
lineage4
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
SRR1175496
|
HR-TB
|
lineage4.9
|
None
|
SRR1175500
|
MDR-TB
|
lineage4
|
None
|
SRR1175507
|
MDR-TB
|
lineage4
|
None
|
SRR1175508
|
Other
|
lineage4.9
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
SRR1180148
|
Sensitive
|
lineage4.9
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
SRR1175513
|
Other
|
lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
SRR1180440
|
Other
|
lineage4.9
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9;lineage2.2
|
None
|
SRR1180446
|
Other
|
lineage4.9
|
None
|
SRR1180479
|
Other
|
lineage1.1.2
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
SRR1181214
|
Other
|
lineage4.9
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2
|
None
|
SRR1181349
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
SRR1181390
|
Sensitive
|
lineage2
|
None
|
SRR1181368
|
Other
|
lineage4.9
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
SRR1184329
|
MDR-TB
|
lineage4.9
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
SRR1184308
|
Sensitive
|
lineage4.9
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
SRR11972367
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1196478
|
MDR-TB
|
lineage4.9
|
None
|
SRR1196545
|
HR-TB
|
lineage4.9
|
None
|
SRR15316595
|
RR-TB
|
lineage4.4.2
|
None
|
SRR15315797
|
RR-TB
|
lineage2.2.1
|
None
|
SRR11972425
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16156188
|
HR-TB
|
lineage4.9
|
None
|
SRR16627752
|
RR-TB
|
lineage4.4
|
None
|
SRR16156804
|
RR-TB
|
lineage4.9
|
None
|
SRR16157123
|
Other
|
lineage4.9
|
None
|
SRR1792022
|
Other
|
La1.8.1
|
None
|
SRR17567887
|
Sensitive
|
lineage4.4.1.2
|
None
|
SRR17567930
|
Other
|
lineage4.4.1.1
|
None
|
SRR21677886
|
Sensitive
|
lineage4.9
|
None
|
SRR20969542
|
Other
|
lineage4.4.2
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18002903
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR2010299
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22175232
|
MDR-TB
|
lineage3.1.2.1
|
None
|
SRR8692800
|
Other
|
lineage4
|
None
|
SRR8692893
|
Other
|
lineage4.9
|
None
|
SRR22424765
|
MDR-TB
|
lineage4
|
None
|
SRR12708416
|
Sensitive
|
lineage4.1
|
None
|
SRR8692885
|
Other
|
lineage4.9
|
None
|
SRR8692887
|
Other
|
|
None
|
SRR8692825
|
Other
|
lineage4.9
|
None
|
SRR8692863
|
Other
|
lineage4;lineage2.2
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
SRR3675455
|
Sensitive
|
lineage4
|
None
|
SRR3601585
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SAMN02599090
|
MDR-TB
|
lineage3
|
None
|
SRR3675472
|
Sensitive
|
lineage4.9
|
None
|
SRR3675477
|
Other
|
lineage4.9
|
None
|
SRR3105762
|
HR-TB
|
|
None
|
SAMN02381009
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR3619764
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR3619841
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMN02360583
|
HR-TB
|
lineage2.2.2
|
None
|
SRR3675209
|
Sensitive
|
lineage4.9
|
None
|
SRR3618864
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3275450
|
Other
|
lineage4
|
None
|
SRR3675210
|
Sensitive
|
lineage4.9
|
None
|
ERR4815471
|
Other
|
lineage4.9
|
None
|
SRR3675266
|
Sensitive
|
lineage4.9
|
None
|
ERR2446544
|
Sensitive
|
lineage3
|
nl
|
ERR1750907
|
RR-TB
|
|
None
|
SRR3675247
|
Other
|
lineage4.9
|
None
|
SRR3675229
|
Other
|
lineage4
|
None
|
SRR3675249
|
Sensitive
|
lineage4.9
|
None
|
ERR176518
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR3675279
|
Other
|
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
SAMN02381005
|
Other
|
lineage4.6.1.1
|
None
|
ERR4813263
|
MDR-TB
|
lineage4.8
|
None
|
SRR3675292
|
Sensitive
|
lineage4
|
None
|
SRR3675318
|
Other
|
lineage4.9
|
None
|
SAMN02381037
|
MDR-TB
|
lineage4.6.1
|
None
|
SRR3675387
|
Sensitive
|
|
None
|
ERR4816991
|
Sensitive
|
lineage4.9
|
None
|
ERR4816964
|
Other
|
lineage4.9
|
None
|
SRR3675510
|
Other
|
|
None
|
SRR3675514
|
Sensitive
|
lineage4.9
|
None
|
SRR3675542
|
Other
|
lineage4.9
|
None
|
SRR3675527
|
RR-TB
|
lineage4.9
|
None
|
SRR3675522
|
Other
|
|
None
|
SRR3675547
|
Other
|
lineage4.9
|
None
|
ERR2027233
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
ERR4816100
|
Sensitive
|
lineage4.1.3;lineage4.1.2.1;lineage1.1.2
|
None
|
SAMN02360581
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4816113
|
Sensitive
|
lineage4.1.1
|
None
|
SRR3675548
|
Sensitive
|
lineage4.9
|
None
|
ERR212114
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR5341422
|
HR-TB
|
lineage2.1
|
None
|
SAMN02360556
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR3675553
|
Sensitive
|
lineage4.9
|
None
|
ERR3275548
|
Sensitive
|
lineage3
|
nl
|
SAMN02381051
|
RR-TB
|
lineage4.6.1.2
|
None
|
ERR2229198
|
MDR-TB
|
lineage4.8
|
None
|
SRR3675577
|
Sensitive
|
lineage4.9
|
None
|
ERR3275709
|
HR-TB
|
lineage3
|
nl
|
SRR3742667
|
Sensitive
|
lineage4.9
|
None
|
ERR2229233
|
Sensitive
|
lineage4
|
None
|
ERR2229234
|
RR-TB
|
lineage4.8
|
None
|
ERR216965
|
HR-TB
|
lineage4.9
|
None
|
SAMN02360571
|
HR-TB
|
lineage2.2.2;lineage2.2.1
|
None
|
SAMN02360586
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4816729
|
Sensitive
|
lineage4.9
|
None
|
ERR4817204
|
RR-TB
|
lineage4.9
|
None
|
SAMN02360590
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR4816702
|
RR-TB
|
lineage4.6.2.2
|
None
|
ERR4816762
|
Other
|
lineage4;lineage2
|
None
|
ERR4816904
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4817292
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SAMN02599089
|
MDR-TB
|
lineage3
|
None
|
ERR2229519
|
Sensitive
|
lineage4.8
|
None
|
SAMN02380990
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SAMN02380982
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SAMN02360595
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR4033549
|
HR-TB
|
lineage2.2.2
|
None
|
SAMN02360570
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMN02360562
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
ERR2513438
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4818710
|
Sensitive
|
lineage4.9
|
None
|
ERR4817998
|
Other
|
lineage3
|
None
|
SAMN02360574
|
HR-TB
|
lineage2.2.1
|
None
|
SAMN02398710
|
MDR-TB
|
lineage2.2.2
|
None
|
SAMN02360591
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SAMN02599179
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4818110
|
Sensitive
|
lineage4.9
|
None
|
SAMN02360580
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2432997
|
Other
|
lineage4.8
|
None
|
ERR2446413
|
Sensitive
|
lineage4.6.3
|
None
|
ERR245675
|
Sensitive
|
lineage1.1.2
|
None
|
ERR2512770
|
Other
|
lineage4.2.1
|
None
|
ERR2513229
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4819051
|
Other
|
lineage4
|
None
|
ERR4818904
|
Other
|
lineage4.8
|
None
|
ERR2513283
|
Other
|
lineage5.1.4
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
SRR5007161
|
RR-TB
|
lineage4.1.1.3.1
|
None
|
SAMN02360577
|
HR-TB
|
lineage3
|
None
|
ERR4818646
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4818624
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR2513724
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR5341373
|
HR-TB
|
lineage4
|
None
|
SRR5341396
|
Other
|
lineage4
|
None
|
SRR5153091
|
HR-TB
|
lineage4.3.3
|
None
|
SRR5341293
|
HR-TB
|
lineage4
|
None
|
SAMN02360563
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4819383
|
RR-TB
|
lineage4.9
|
None
|
SAMN02360564
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4819462
|
Other
|
lineage4
|
None
|
SRR5341400
|
HR-TB
|
lineage4
|
None
|
ERR4819357
|
Other
|
lineage4.9
|
None
|
ERR4819430
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR5341432
|
HR-TB
|
lineage4
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
SAMN02599061
|
MDR-TB
|
lineage3
|
None
|
ERR2514552
|
Sensitive
|
lineage3
|
None
|
ERR4820503
|
Other
|
lineage2.2.1
|
None
|
SRR5341296
|
Sensitive
|
lineage4.9
|
None
|
ERR4819863
|
RR-TB
|
lineage4.9
|
None
|
SRR5341315
|
Sensitive
|
|
None
|
ERR4819910
|
Other
|
lineage4.9
|
None
|
ERR1023509
|
Other
|
|
None
|
ERR4819933
|
Other
|
lineage4.9
|
None
|
SRR5341313
|
HR-TB
|
|
None
|
ERR2446382
|
Other
|
lineage4
|
None
|
ERR4820030
|
Other
|
lineage4.9
|
None
|
SRR5341323
|
Sensitive
|
lineage4
|
None
|
ERR2517457
|
Sensitive
|
lineage3
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
SAMN02360585
|
HR-TB
|
lineage4.5
|
None
|
SRR5341330
|
HR-TB
|
|
None
|
ERR4821811
|
RR-TB
|
lineage4.9
|
None
|
ERR2517475
|
Other
|
lineage4
|
None
|
SRR6045706
|
Sensitive
|
lineage4
|
None
|
SAMN02360579
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR6045503
|
HR-TB
|
|
None
|
ERR4821172
|
RR-TB
|
lineage4.9
|
None
|
ERR4821272
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR4821057
|
HR-TB
|
lineage4
|
None
|
SAMN02381047
|
Sensitive
|
lineage4.6.1
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR6045664
|
Other
|
lineage4.2.1
|
None
|
SRR6045795
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6044780
|
Other
|
lineage4.9
|
None
|
SRR6044876
|
Sensitive
|
lineage4
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
SRR6044838
|
Other
|
lineage4.9
|
None
|
SRR6044835
|
Sensitive
|
lineage4
|
None
|
SRR6045371
|
Sensitive
|
lineage4.2.1
|
None
|
SRR6045010
|
Other
|
lineage4
|
None
|
SRR6045002
|
MDR-TB
|
lineage4.9
|
None
|
SRR6045320
|
Other
|
lineage4.9
|
None
|
SRR6046385
|
Other
|
lineage4.9
|
None
|
SRR6045399
|
Other
|
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
SRR6046210
|
Other
|
lineage4
|
None
|
SRR6046376
|
Other
|
lineage3
|
None
|
ERR2851356
|
Sensitive
|
lineage4.9
|
None
|
SRR6046611
|
HR-TB
|
lineage4.9
|
None
|
ERR4829238
|
Sensitive
|
lineage3
|
None
|
SRR6046609
|
Sensitive
|
lineage4.9
|
None
|
SRR6046802
|
Other
|
lineage4
|
None
|
SRR6046839
|
Other
|
lineage4.9
|
None
|
SRR6046834
|
Sensitive
|
lineage4.9
|
None
|
ERR323037
|
HR-TB
|
lineage4
|
None
|
SRR6046897
|
Sensitive
|
lineage4
|
None
|
ERR502474
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR485006
|
HR-TB
|
lineage4.9
|
None
|
ERR502473
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR502481
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|
ERR502479
|
RR-TB
|
lineage4.9
|
None
|
SRR6982246
|
Sensitive
|
lineage4
|
None
|
SRR6982239
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR4831638
|
Sensitive
|
|
None
|
ERR4831716
|
HR-TB
|
lineage1.1.1.1
|
None
|
ERR4831841
|
HR-TB
|
lineage4.4.2;lineage2.2.1
|
None
|
SRR8217918
|
HR-TB
|
|
None
|
ERR323035
|
Sensitive
|
lineage4.9
|
None
|
ERR502943
|
HR-TB
|
|
None
|
SRR7131160
|
Sensitive
|
lineage3
|
None
|
SRR7535047
|
RR-TB
|
lineage4.6.1.1
|
None
|
SRR7535074
|
Sensitive
|
lineage3
|
None
|
SRR7535053
|
Sensitive
|
lineage3
|
None
|
SRR7535054
|
Sensitive
|
lineage4.6.1
|
None
|
SRR7535077
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR7535079
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535073
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7585435
|
Other
|
lineage4.9
|
None
|
SRR7535081
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535082
|
Sensitive
|
lineage4
|
None
|
SRR7535080
|
HR-TB
|
lineage4.8
|
None
|
SRR7645901
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7645899
|
RR-TB
|
lineage2.2.1
|
None
|
SRR7645906
|
Other
|
lineage2.2.1
|
None
|
SRR7645936
|
Sensitive
|
lineage2.2.1
|
None
|
SRR7645927
|
Other
|
lineage4.8
|
None
|
SRR7645928
|
RR-TB
|
lineage4.7
|
None
|
SRR7645972
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR7645971
|
Other
|
lineage2.2.1
|
None
|
SRR7755645
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7645977
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR9971080
|
RR-TB
|
lineage2.2.1
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR7755657
|
Other
|
lineage4.8
|
None
|
SRR7755649
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR7755655
|
Other
|
lineage4.1.2.1
|
None
|
ERR1034634
|
HR-TB
|
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR9971168
|
Other
|
lineage4.3.2.1
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
DRR184982
|
RR-TB
|
lineage2.2.1
|
None
|
ERR036207
|
Other
|
lineage4.9
|
None
|
ERR1023502
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7755688
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR1023494
|
Sensitive
|
lineage3
|
None
|
ERR1034652
|
Other
|
|
None
|
ERR1034647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR3283028
|
Other
|
|
None
|
ERR3283014
|
HR-TB
|
|
None
|
ERR1063855
|
Other
|
lineage4
|
None
|
ERR10762297
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR10796559
|
Other
|
lineage4.9
|
None
|
ERR108125
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR3283047
|
HR-TB
|
|
None
|
ERR3283031
|
HR-TB
|
|
None
|
ERR3283049
|
Sensitive
|
lineage4.9
|
None
|
ERR3283057
|
HR-TB
|
lineage4
|
None
|
ERR3324368
|
RR-TB
|
lineage6.2.3;lineage1.1.2
|
None
|
ERR3445487
|
Other
|
La1.7.X-unk4
|
None
|
ERR3439265
|
Other
|
lineage4.9
|
None
|
ERR349265
|
Sensitive
|
lineage4
|
None
|
ERR3468488
|
RR-TB
|
La1.8.1
|
None
|
ERR349264
|
Sensitive
|
lineage4
|
None
|
ERR363445
|
Sensitive
|
lineage4
|
None
|
ERR349298
|
Sensitive
|
lineage4
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR363421
|
Sensitive
|
lineage4
|
None
|
ERR363446
|
Sensitive
|
lineage4
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR349296
|
Sensitive
|
lineage4
|
None
|
ERR349299
|
Sensitive
|
lineage4
|
None
|
ERR349330
|
Sensitive
|
lineage4
|
None
|
ERR363426
|
Sensitive
|
lineage4
|
None
|
ERR363437
|
Sensitive
|
lineage4
|
None
|
ERR363449
|
Sensitive
|
lineage4
|
None
|
ERR363447
|
Sensitive
|
lineage4
|
None
|
ERR363456
|
Sensitive
|
lineage4
|
None
|
ERR363453
|
Sensitive
|
lineage4
|
None
|
ERR363474
|
Sensitive
|
lineage4
|
None
|
ERR363498
|
Sensitive
|
lineage4
|
None
|
ERR363499
|
Sensitive
|
lineage4
|
None
|
ERR363479
|
Sensitive
|
lineage4
|
None
|
ERR369151
|
Sensitive
|
lineage4.9
|
None
|
ERR363500
|
Sensitive
|
lineage4
|
None
|
ERR363509
|
Sensitive
|
lineage4
|
None
|
ERR363490
|
Sensitive
|
lineage4
|
None
|
ERR363502
|
Sensitive
|
lineage4
|
None
|
ERR363506
|
Sensitive
|
lineage4
|
None
|
ERR369158
|
Sensitive
|
lineage4
|
None
|
ERR369156
|
Sensitive
|
lineage4.9
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
ERR369159
|
Sensitive
|
lineage4
|
None
|
ERR369163
|
Sensitive
|
lineage4
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR369162
|
Sensitive
|
lineage4
|
None
|
ERR373946
|
Sensitive
|
lineage4
|
None
|
ERR373945
|
HR-TB
|
lineage4
|
None
|
ERR373947
|
Sensitive
|
lineage4
|
None
|
ERR3797048
|
HR-TB
|
|
None
|
ERR3797079
|
Sensitive
|
lineage4
|
None
|
ERR3797065
|
MDR-TB
|
lineage4
|
None
|
ERR3797063
|
HR-TB
|
|
None
|
ERR3797087
|
Sensitive
|
lineage4
|
None
|
ERR3797064
|
Sensitive
|
|
None
|
ERR3797084
|
Sensitive
|
lineage4.9
|
None
|
ERR4188247
|
HR-TB
|
|
None
|
ERR3806850
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR400345
|
Other
|
lineage4
|
None
|
ERR405209
|
Sensitive
|
lineage4
|
None
|
ERR405219
|
HR-TB
|
lineage4;lineage3.1
|
None
|
ERR400320
|
Sensitive
|
lineage4
|
None
|
ERR400326
|
Sensitive
|
lineage4
|
None
|
ERR400336
|
Sensitive
|
lineage4
|
None
|
ERR400538
|
RR-TB
|
lineage5.1.2
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
ERR4178309
|
Other
|
lineage4.1.2.1
|
None
|
ERR4627311
|
Other
|
La1.8.1
|
None
|
ERR4596910
|
Sensitive
|
lineage4
|
None
|
ERR473332
|
Other
|
lineage4
|
None
|
ERR473303
|
Sensitive
|
lineage4.9
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR473334
|
HR-TB
|
lineage4.9
|
None
|
ERR4769408
|
Other
|
La1.3
|
None
|
ERR473367
|
Sensitive
|
lineage4.9
|
None
|
ERR4769442
|
HR-TB
|
lineage4
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
ERR4769474
|
HR-TB
|
lineage4
|
None
|