Rv0668 - c.-534C>T
Drug resistance types
51 Sensitive
5 RR-TB
81 HR-TB
6 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| 69 | |
| lineage4.9 | 31 |
| lineage4.9.1 | 1 |
| lineage4.3.4 | 4 |
| lineage4 | 55 |
| lineage4.1.2.1 | 6 |
| lineage4.5 | 2 |
| lineage2.2 | 6 |
| lineage1.1.3.1 | 1 |
| lineage1.2.1.2 | 1 |
| La3 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.1.1.3 | 1 |
| lineage3 | 6 |
| lineage2.2.1 | 6 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.8 | 2 |
| lineage4.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2.1 | 1 |
| La1 | 1 |
| La1.2 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 207 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6359045 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | None | ERR702406 | HR-TB | None | ERR245758 | Other | lineage4.9.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736848 | HR-TB | None | ERR736839 | Other | None | ERR752229 | Other | lineage4.5 | None | ERR736875 | HR-TB | lineage4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR16157123 | Other | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR14782405 | HR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR16156188 | HR-TB | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR17658565 | Other | lineage3 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR2101360 | MDR-TB | lineage4.1.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR181744 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675234 | Other | None | SRR3675265 | Other | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176651 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | ERR181887 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675456 | HR-TB | None | ERR176751 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR5341400 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341456 | Other | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | ERR2515228 | Other | lineage2.2.1 | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2693230 | Other | None | ERR2693231 | Other | None | SRR6045450 | Other | lineage4.9 | None | SRR6045503 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR5535933 | HR-TB | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821693 | HR-TB | lineage4.3.3 | None | SRR6045555 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045892 | Sensitive | None | ERR2693232 | Other | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6046046 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045399 | Other | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046299 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046492 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046644 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831117 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR1063859 | HR-TB | None | SRR6982365 | Other | lineage2.2.1 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | SRR8217918 | HR-TB | None | SRR7535086 | Other | None | ERR323045 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR3283032 | HR-TB | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR3283010 | Other | La1 | None | ERR3283024 | Other | None | ERR3445504 | HR-TB | None | ERR3283055 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR349296 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797044 | Other | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR4769442 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4188247 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR387051 | HR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798431 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4811493 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6198317 | Other | La1.2 | None |
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