Rv0668 - c.-537C>T
Drug resistance types
47 Sensitive
2 RR-TB
56 HR-TB
9 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.1 | 1 |
| La1.8.1 | 1 |
| 45 | |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4 | 54 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.9 | 7 |
| lineage4.9;lineage2.1 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.6.2.2 | 2 |
| lineage2.2 | 5 |
| lineage2.2.1 | 8 |
| lineage4.1 | 1 |
| lineage4.6.1.2 | 1 |
| La2 | 1 |
| lineage4.1.2 | 2 |
| lineage3 | 4 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage1.1.2 | 2 |
| lineage3.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 155 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1792478 | HR-TB | La1.7.1 | None | SRR1791747 | Other | La1.8.1 | None | ERR181887 | HR-TB | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR181824 | HR-TB | lineage4 | None | ERR176651 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR176740 | HR-TB | None | SRR3675510 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR3675571 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819051 | Other | lineage4 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Sensitive | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045892 | Sensitive | None | SRR5341470 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046210 | Other | lineage4 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6511621 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR294266 | HR-TB | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | ERR502524 | HR-TB | La2 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR2510608 | MDR-TB | lineage3 | pk | ERR502510 | Sensitive | lineage4 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323039 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR323053 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1034634 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3445501 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR4195665 | Sensitive | lineage3 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4797264 | Sensitive | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358979 | Other | None | ERR5863911 | MDR-TB | lineage2.2 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866639 | Other | None | ERR736865 | HR-TB | None | ERR736848 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR736872 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR987722 | HR-TB | None | ERR9786843 | Other | None | ERR990545 | Other | lineage3 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1173568 | Other | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR14801522 | Sensitive | lineage4.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12830409 | Sensitive | lineage4.3.3 | None | SRR14801749 | Sensitive | None |
|---|
