Rv0668 - c.-558C>G
Drug resistance types
65 Sensitive
2 RR-TB
139 HR-TB
11 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
82 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 47 |
| 138 | |
| lineage4.9 | 33 |
| lineage2.2.1 | 19 |
| lineage4.9;lineage2.1 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.1.2.1 | 7 |
| lineage4.6.2.2 | 4 |
| lineage3.1 | 2 |
| lineage2.2 | 7 |
| lineage4.1 | 2 |
| La2 | 1 |
| lineage4.1.2 | 2 |
| La1 | 2 |
| lineage3 | 9 |
| lineage4.9;La1.3 | 1 |
| La1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage1.2.2.1 | 1 |
| lineage6.1.3 | 1 |
| La3 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.1.1 | 2 |
| lineage9;lineage3.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.8 | 2 |
| lineage4.1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 307 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341303 | RR-TB | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | ERR1023509 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515228 | Other | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | ERR2693239 | HR-TB | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | ERR2693257 | Other | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR278594 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044780 | Other | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045233 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831117 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311081 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR294248 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982365 | Other | lineage2.2.1 | None | ERR323036 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR502524 | HR-TB | La2 | None | ERR323038 | HR-TB | None | ERR5311090 | HR-TB | None | SRR8217918 | HR-TB | None | SRR7535086 | Other | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323041 | HR-TB | None | ERR323039 | HR-TB | None | ERR323063 | HR-TB | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323107 | Other | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR1063862 | HR-TB | None | ERR1063896 | Sensitive | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283010 | Other | La1 | None | ERR137286 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR3283024 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3439432 | Other | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797044 | Other | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797061 | Other | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR387051 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR403298 | HR-TB | lineage4 | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796577 | MDR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358979 | Other | None | ERR6359045 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866022 | Other | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6866410 | Sensitive | None | ERR736835 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736839 | Other | None | ERR736875 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR8976043 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR7821210 | Sensitive | lineage1.2.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786843 | Other | None | ERR987722 | HR-TB | None | ERR9896144 | Other | lineage3 | None | ERR990545 | Other | lineage3 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1169249 | Other | La3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1169306 | Other | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR14801749 | Sensitive | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14782405 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | SRR17658565 | Other | lineage3 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR1640750 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6325445 | HR-TB | None | ERR176778 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR2101360 | MDR-TB | lineage4.1.2.1 | None | ERR1035239 | HR-TB | None | ERR158583 | HR-TB | None | ERR181744 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675502 | Other | None | SRR3675486 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675234 | Other | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR176643 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675545 | HR-TB | None | ERR4815551 | Other | lineage2.2.1 | None | ERR176740 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675510 | Other | None | ERR176751 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212034 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | ERR4816470 | Other | lineage3 | None | ERR212121 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816656 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR1035162 | Other | None | SRR5341373 | HR-TB | lineage4 | None | ERR4818929 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4819051 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341456 | Other | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341418 | Other | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | None | SRR5341455 | Sensitive | lineage4 | None |
|---|
