Rv0668 - c.-588T>C


Drug resistance types
40 Sensitive 2 RR-TB 172 HR-TB 11 MDR-TB 12 Pre-XDR-TB 0 XDR-TB 98 Other
lineage Counts
lineage Count
184
lineage4 41
lineage2.2.1 14
lineage4.9 19
lineage2.1 3
lineage4.8 2
lineage4.8;La3 1
lineage2.2 8
La1.8.1 2
lineage1.1.1 2
lineage3 4
lineage4.1.2.1 11
lineage4.4.1.1 1
lineage4.3.4.2.1 1
lineage3.1 4
La2 1
lineage4.7 1
lineage4.4.1.2 1
lineage4.1.1.3 1
La1 2
lineage4.6.2.2 3
La1.2 1
lineage4.9;La1.3 1
lineage2 3
lineage1.1.2 2
lineage3.1.2 1
lineage4.3.4 2
lineage6.1.3 1
lineage4.3.2 1
lineage4.1.1 2
lineage6 1
lineage6.3.1 1
lineage2.2.1.2 1
lineage2.2.1.1 3
lineage4.3.3 1
lineage1.2.1.2 1
lineage4.5 1
lineage9;lineage3.1 1
lineage2.2.1;La3 1
lineage4.9;La3 1
lineage3;lineage2.2.1 1
lineage6.3;lineage2.2.1 1
lineage4.1 1
spoligotype Counts
spoligotype Count
None 335
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176651 HR-TB None
SRR3675312 HR-TB lineage4 None
ERR4815551 Other lineage2.2.1 None
ERR181887 HR-TB None
ERR176740 HR-TB None
SRR3675550 Other None
ERR4816999 Other None
SRR3675545 HR-TB None
ERR4817037 Other lineage4.9 None
ERR212001 HR-TB None
SRR5341422 HR-TB lineage2.1 None
ERR4817060 RR-TB None
ERR212034 HR-TB None
ERR212125 HR-TB lineage4 None
SRR3675558 HR-TB None
ERR212123 Other None
SRR3675571 HR-TB None
SRR3675574 HR-TB None
ERR212138 HR-TB lineage4 None
ERR4816466 HR-TB None
ERR4817896 HR-TB lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR4817893 Other lineage4.8;La3 None
SRR3742665 HR-TB None
ERR4816585 Other lineage2.2 None
ERR4816656 HR-TB None
ERR4818021 Other La1.8.1 None
ERR4819314 Other lineage1.1.1 None
ERR1035162 Other None
ERR234659 HR-TB None
SRR5341373 HR-TB lineage4 None
ERR4818929 HR-TB None
ERR4818615 Other None
SRR5341400 HR-TB lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341432 HR-TB lineage4 None
ERR1035138 MDR-TB None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341418 Other None
ERR4819546 HR-TB lineage3 None
SRR5341455 Sensitive lineage4 None
SRR5341293 HR-TB lineage4 None
ERR4820854 Other lineage4.1.2.1 None
SRR5341302 HR-TB None
ERR1023509 Other None
SRR5341333 HR-TB None
ERR2514692 Other None
SRR5341313 HR-TB None
SRR5341315 Sensitive None
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6045526 HR-TB None
SRR5341470 HR-TB None
SRR6045503 HR-TB None
ERR2693238 HR-TB lineage4.9 None
ERR2693239 HR-TB None
SRR5535933 HR-TB None
SRR6045706 Sensitive lineage4 None
SRR6045519 HR-TB None
ERR2660539 Other lineage4.9 None
ERR278594 HR-TB None
SRR6045555 HR-TB None
SRR6044790 HR-TB None
SRR6046133 HR-TB None
SRR6045053 Other None
SRR6044875 HR-TB lineage4.9 None
SRR6044835 Sensitive lineage4 None
SRR6044855 Other lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045952 HR-TB None
SRR6046046 Other None
SRR6045191 Sensitive lineage4.9 None
SRR6045233 HR-TB None
SRR6045217 Other lineage4 None
SRR6046066 HR-TB None
SRR6045327 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6325442 HR-TB None
ERR4830353 Other None
SRR6046362 HR-TB None
ERR4831367 Sensitive lineage4.8 de
SRR6325444 HR-TB None
SRR6046397 Other None
SRR6046492 Other None
SRR6046460 HR-TB None
SRR6046482 HR-TB None
SRR6325448 HR-TB None
SRR6046514 HR-TB None
SRR6046521 Other lineage4.4.1.1 None
SRR6046824 HR-TB None
SRR6046540 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6325447 HR-TB None
SRR6046644 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
SRR6046878 HR-TB lineage4 None
SRR6511621 HR-TB None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6479538 Other None
ERR4831117 HR-TB None
ERR11466146 Other lineage4.3.4.2.1 None
ERR323034 HR-TB lineage3.1 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
SRR6832787 RR-TB lineage2.2.1 None
ERR294248 HR-TB None
SRR6789626 Other None
ERR323036 HR-TB None
ERR294266 HR-TB None
ERR5311099 HR-TB None
ERR502510 Sensitive lineage4 None
ERR502524 HR-TB La2 None
ERR502532 HR-TB None
ERR502889 Other None
SRR7496517 Other None
ERR5311081 HR-TB None
ERR5311090 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
ERR323038 HR-TB None
SRR7496509 Other None
SRR7496471 Sensitive None
ERR323043 HR-TB None
SRR7496523 Other lineage4.7 None
ERR323039 HR-TB None
ERR323041 HR-TB None
ERR323055 HR-TB None
ERR323107 Other lineage4 None
ERR323053 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323063 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323108 HR-TB lineage4 None
ERR067681 HR-TB None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1035157 Other lineage4.9 None
ERR1063857 HR-TB None
ERR1063862 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR1035122 Sensitive None
ERR11465024 Other lineage4.1.1.3 None
ERR1063839 HR-TB lineage2.2 None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR1063896 Sensitive None
ERR108471 HR-TB lineage4 None
ERR133825 Sensitive lineage4 None
ERR3283010 Other La1 None
ERR133986 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283025 HR-TB None
ERR3283017 HR-TB None
ERR3283055 HR-TB None
ERR3283036 HR-TB None
ERR3283027 HR-TB None
ERR349299 Sensitive lineage4 None
ERR3445503 HR-TB None
ERR3468544 HR-TB None
ERR3439432 Other None
ERR363498 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR3797016 HR-TB None
ERR373946 Sensitive lineage4 None
ERR3797043 HR-TB None
ERR3797046 HR-TB None
ERR3797036 HR-TB None
ERR3797069 Other None
ERR4596902 HR-TB lineage3 None
ERR403298 HR-TB lineage4 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR4024991 Other None
ERR4188350 HR-TB None
ERR4407463 HR-TB None
ERR473332 Other lineage4 None
ERR4596910 Sensitive lineage4 None
ERR4769452 HR-TB None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769497 HR-TB La1.2 None
ERR4769450 HR-TB None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769457 Other lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4769521 HR-TB None
ERR4796929 Sensitive lineage4 None
ERR4796577 MDR-TB None
ERR4797474 Other None
ERR4797184 Sensitive lineage4 None
ERR4798139 Sensitive lineage1.1.2 None
ERR4798099 Other None
ERR4798262 HR-TB La1 None
ERR4799378 Sensitive lineage4 None
ERR4798406 HR-TB None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799025 Pre-XDR-TB None
ERR4800341 Other lineage3 None
ERR4810741 HR-TB None
ERR4810624 HR-TB lineage2.2 None
ERR4811142 MDR-TB None
ERR4811022 HR-TB None
ERR4811105 HR-TB None
ERR4811493 HR-TB None
ERR6358837 HR-TB None
ERR5336148 Other None
ERR6358979 Other None
ERR6866022 Other None
ERR702406 HR-TB None
ERR6866639 Other None
ERR702404 HR-TB None
ERR6866807 HR-TB lineage4 None
ERR736817 HR-TB lineage4.3.4 None
ERR736839 Other None
ERR736834 Sensitive lineage4 None
ERR736835 HR-TB None
ERR8976043 HR-TB None
ERR736865 HR-TB None
ERR736872 Sensitive lineage4 None
ERR736867 HR-TB None
ERR736875 HR-TB lineage4 None
ERR736874 HR-TB None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR987722 HR-TB None
ERR9117709 HR-TB None
ERR9119669 HR-TB None
ERR9787153 Other lineage6.1.3 None
ERR9117805 Other lineage4.3.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786604 Other None
ERR9786617 Other lineage4.1.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786671 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786843 Other None
ERR9787165 Other lineage6 None
ERR9787139 Other lineage6.3.1 None
ERR9787197 Other None
SRR10809074 Sensitive lineage4 None
SRR1158918 Sensitive lineage4 None
SRR1162740 Other lineage4.1.2.1 None
SRR1173118 Other None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1169194 Other None
SRR1172234 Other None
SRR1172728 MDR-TB None
SRR1172817 HR-TB None
SRR1172951 Other None
SRR1172310 HR-TB None
SRR1173166 Other lineage4.9 None
SRR1173153 HR-TB None
SRR1173778 Other None
SRR1173384 Other lineage4 None
SRR1173629 Other None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1173788 Other None
SRR1174897 HR-TB None
SRR1181020 Other lineage2.2.1 None
SRR1180137 Other lineage2.2.1 None
SRR1180172 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1184024 Other lineage2.2.1.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1181289 Other lineage2.2.1 None
SRR1183144 Other lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1184294 HR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184381 MDR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1184380 HR-TB None
SRR1184388 Other None
SRR1196566 HR-TB None
SRR1196546 HR-TB None
SRR1196677 HR-TB lineage2 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR15368973 Other None
SRR1196768 MDR-TB None
SRR12006550 Other lineage1.2.1.2 None
SRR12142341 HR-TB None
SRR12416824 HR-TB None
SRR14782405 HR-TB None
SRR14066533 Sensitive lineage1.1.1 None
SRR14801749 Sensitive None
SRR25827687 MDR-TB lineage1.1.2 None
SRR18213713 HR-TB lineage4.5 None
SRR1640750 HR-TB None
SRR1710057 Other lineage2.1 None
SRR1791747 Other La1.8.1 None
SRR19295647 Sensitive lineage4.9 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR21677886 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR2101360 MDR-TB lineage4.1.2.1 None
SRR25827682 Other None
SRR20969677 HR-TB lineage2 None
SRR26937071 MDR-TB lineage2.2.1;La3 None
SRR26159043 Other lineage4.9 None
SRR26399973 Other lineage4.9;La3 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR176793 Other lineage4.1.1 None
ERR176778 HR-TB None
SRR3675464 HR-TB lineage4.1 None
ERR176779 HR-TB None
SRR6325445 HR-TB None
ERR158583 HR-TB None
SRR3675465 HR-TB None
ERR1035239 HR-TB None
SRR3675488 HR-TB None
SRR3675502 Other None
SRR3675482 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR161033 HR-TB None
ERR181744 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
SRR3675486 HR-TB None
SRR3416776 Other lineage2.1 None
SRR3675221 HR-TB None
SRR3675236 HR-TB None
SRR3675222 Other None
SRR3675501 HR-TB None
SRR3675270 HR-TB None
ERR181824 HR-TB lineage4 None
SRR3675311 Other None
ERR4813270 Sensitive lineage4.1.2.1 None