Rv0668 - p.Ala521Asp
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
12 RR-TB
0 HR-TB
159 MDR-TB
59 Pre-XDR-TB
12 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1 | 5 |
| lineage4.3.3 | 34 |
| lineage4.1.2.1.1 | 1 |
| lineage2.2.1 | 113 |
| lineage2.2.1.1 | 13 |
| lineage3 | 14 |
| lineage4.3.4.2 | 1 |
| lineage4.2.1 | 32 |
| lineage4.1.1.3 | 3 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2 | 4 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.3.3 | 3 |
| lineage4.1.2.1;lineage4.3.3 | 1 |
| lineage2.2.1;lineage4.3.2.1 | 1 |
| 1 | |
| lineage4.2.2.2 | 1 |
| lineage2.2.1;lineage4.4.1.1 | 1 |
| lineage4.3.1 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.2.1;lineage4.3.3 | 1 |
| lineage1.1.2 | 2 |
| lineage3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 242 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN13195582 | Pre-XDR-TB | lineage2.1 | None | SRR10394883 | Pre-XDR-TB | lineage2.1 | None | SRR12072597 | Pre-XDR-TB | lineage2.1 | None | SRR11828988 | Pre-XDR-TB | lineage2.1 | None | ERR10877887 | Pre-XDR-TB | lineage4.3.3 | None | ERR9027256 | MDR-TB | lineage4.3.3 | None | ERR11068718 | MDR-TB | lineage4.3.3 | None | ERR760757 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | SRR16088530 | MDR-TB | lineage4.3.3 | None | SRR16156212 | MDR-TB | lineage2.2.1 | None | ERR4831831 | MDR-TB | lineage2.2.1.1 | vn | ERR4831870 | MDR-TB | lineage2.2.1.1 | vn | SRR6397708 | MDR-TB | lineage2.2.1 | ca | SRR2024953 | MDR-TB | lineage2.2.1 | cn | DRR130214 | RR-TB | lineage2.2.1 | None | SRR16156207 | MDR-TB | lineage2.2.1 | None | SRR16156283 | MDR-TB | lineage2.2.1 | None | ERR1873545 | MDR-TB | lineage2.2.1 | za | ERR1873458 | Pre-XDR-TB | lineage2.2.1 | za | ERR067723 | MDR-TB | lineage2.2.1 | ru | ERR144573 | MDR-TB | lineage2.2.1 | ru | ERR2677422 | MDR-TB | lineage3 | de | ERR4819327 | MDR-TB | lineage4.3.3 | gb | SRR10380106 | Pre-XDR-TB | lineage4.3.3 | None | ERR1034869 | MDR-TB | lineage4.3.4.2 | pt | SRR16156702 | MDR-TB | lineage2.2.1 | None | ERR11043742 | MDR-TB | lineage4.2.1 | None | ERR10869162 | MDR-TB | lineage4.3.3 | None | SRR5341247 | MDR-TB | lineage2.2.1 | in | ERR13285273 | MDR-TB | lineage2.2.1 | None | ERR13276262 | MDR-TB | lineage4.2.1 | None | ERR9119744 | MDR-TB | lineage4.1.1.3 | None | SRR26936976 | MDR-TB | lineage2.2.1 | None | ERR13093934 | Pre-XDR-TB | lineage4.3.3 | None | ERR13284461 | Pre-XDR-TB | lineage2.2.1 | None | ERR7975634 | Pre-XDR-TB | lineage4.3.3 | None | ERR2677456 | MDR-TB | lineage4.2.1 | de | ERR11043117 | MDR-TB | lineage4.2.1 | None | SRR15316309 | RR-TB | lineage2.2.1 | None | SRR28888085 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866113 | MDR-TB | lineage2.2.1 | None | DRR474192 | RR-TB | lineage2.2.1 | None | ERR9120049 | MDR-TB | lineage2.2.1 | None | ERR11252583 | MDR-TB | lineage4.8 | None | ERR10748329 | MDR-TB | lineage4.3.2.1 | None | SRR21001886 | Pre-XDR-TB | lineage2.2.1 | None | SRR21576605 | RR-TB | lineage2.1 | None | ERR10867701 | MDR-TB | lineage4.3.3 | None | ERR11043677 | MDR-TB | lineage3 | None | SRR27069446 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120080 | MDR-TB | lineage2.2.1 | None | SRR29231557 | MDR-TB | lineage4.1.2 | None | SRR28646080 | MDR-TB | lineage4.1.2.1 | None | SRR29096818 | MDR-TB | lineage2.2.1 | None | ERR13284677 | MDR-TB | lineage4.2.1 | None | SRR16157051 | MDR-TB | lineage2.2.1 | None | SRR11972352 | MDR-TB | lineage2.2.1.1 | None | SRR6256997 | Pre-XDR-TB | lineage4.3.3 | None | SRR29539640 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156266 | MDR-TB | lineage2.2.1 | None | ERR4011088 | MDR-TB | lineage2.2.1 | None | SRR29539260 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865632 | MDR-TB | lineage4.2.1 | None | ERR11081402 | MDR-TB | lineage4.2.1 | None | SRR29539761 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR16156794 | MDR-TB | lineage2.2.1 | None | SRR29539204 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866595 | MDR-TB | lineage4.3.3 | None | SRR29093183 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9027236 | MDR-TB | lineage4.3.3 | None | ERR4828837 | MDR-TB | lineage4.2.1 | None | ERR13266509 | XDR-TB | lineage2.2.1 | None | SRR25207099 | Pre-XDR-TB | lineage2.2.1 | None | ERR11774905 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351226 | MDR-TB | lineage4.2.1 | None | ERR13276296 | MDR-TB | lineage4.2.1 | None | ERR6362393 | MDR-TB | lineage4.1.1.3 | None | ERR10748383 | MDR-TB | lineage2.2.1 | None | ERR2510608 | MDR-TB | lineage3 | pk | ERR13276322 | MDR-TB | lineage4.2.1 | None | ERR11081492 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797570 | Pre-XDR-TB | lineage2.2.1;lineage4 | in | ERR5866491 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13284402 | MDR-TB | lineage4.2.1 | None | SRR16156270 | MDR-TB | lineage2.2.1 | None | ERR4800554 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | in | ERR2600587 | MDR-TB | lineage2.2.1 | None | SRR6397784 | MDR-TB | lineage2.2.1 | ca | ERR4808883 | MDR-TB | lineage2.2.1 | za | ERR4809014 | MDR-TB | lineage2.2.1.1 | za | ERR10748437 | MDR-TB | lineage2.2.1 | None | SRR6397471 | XDR-TB | lineage2.2.1 | ca | ERR5865631 | MDR-TB | lineage4.2.1 | None | SRR6397730 | MDR-TB | lineage2.2.1 | ca | ERR4831867 | MDR-TB | lineage2.2.1.1 | vn | ERR4831893 | MDR-TB | lineage2.2.1.1 | vn | DRR474160 | RR-TB | lineage2.2.1 | None | ERR4830615 | MDR-TB | lineage2.2.1 | None | ERR502894 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972307 | MDR-TB | lineage2.2.1 | None | ERR2514106 | Pre-XDR-TB | lineage3 | gb | ERR11067657 | MDR-TB | lineage4.2.1 | None | ERR4011059 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397094 | Pre-XDR-TB | lineage2.2.1 | None | ERR10867788 | MDR-TB | lineage4.3.3 | None | ERR9027230 | MDR-TB | lineage4.1.2.1;lineage4.3.3 | None | SRR5067544 | MDR-TB | lineage2.2.1.1 | vn | SRR27069403 | MDR-TB | lineage2.2.1 | None | DRR474012 | RR-TB | lineage2.2.1 | None | ERR9120050 | MDR-TB | lineage2.2.1 | None | ERR10877893 | MDR-TB | lineage4.3.3 | None | ERR4799226 | Pre-XDR-TB | lineage2.2.1 | in | ERR13286192 | MDR-TB | lineage2.2.1 | None | ERR4817820 | MDR-TB | lineage4.3.3 | gb | ERR13286073 | MDR-TB | lineage2.2.1;lineage4.3.2.1 | None | SRR16156782 | MDR-TB | lineage2.2.1 | None | ERR4809188 | MDR-TB | lineage2.2.1 | za | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | ERR553389 | MDR-TB | lineage2.2.1 | None | ERR2517075 | MDR-TB | lineage4.3.3 | gb | SRR11662520 | Pre-XDR-TB | lineage2.2.1 | None | SRR25515517 | MDR-TB | lineage2.2.1 | None | ERR11082888 | MDR-TB | lineage4.2.1 | None | ERR10748303 | MDR-TB | lineage2.2.1 | None | ERR10748143 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397230 | MDR-TB | lineage4.2.1 | None | ERR11081166 | MDR-TB | lineage4.2.1 | None | SRR16156724 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285272 | MDR-TB | lineage2.2.1 | None | ERR11081834 | MDR-TB | lineage4.2.1 | None | ERR9120154 | MDR-TB | lineage2.2.1 | None | ERR5866596 | MDR-TB | lineage4.3.3 | None | ERR4011093 | MDR-TB | lineage2.2.1 | None | SRR29093423 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017390 | MDR-TB | lineage3 | None | DRR474070 | RR-TB | lineage2.2.1 | None | ERR10869501 | MDR-TB | lineage4.3.3 | None | SRR7069510 | MDR-TB | lineage4.3.3 | None | SRR7068914 | Pre-XDR-TB | lineage3 | None | ERR5987359 | MDR-TB | lineage2.2.1 | None | SRR29056141 | MDR-TB | lineage4.3.3 | None | ERR5987403 | MDR-TB | lineage2.2.1 | None | SRR16156246 | MDR-TB | lineage2.2.1 | None | ERR11082008 | MDR-TB | lineage4.2.1 | None | SRR24255990 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285041 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR11972338 | MDR-TB | lineage2.2.1.1 | None | SRR7069386 | MDR-TB | lineage4.3.3 | None | ERR13284616 | MDR-TB | lineage4.2.1 | None | ERR7737799 | MDR-TB | lineage3 | None | SRR14088383 | XDR-TB | lineage3 | None | ERR13267672 | MDR-TB | lineage3 | None | ERR13264908 | RR-TB | lineage2.2.1 | None | ERR4799005 | XDR-TB | lineage3 | in | ERR13284707 | MDR-TB | lineage2.2.1 | None | ERR13284365 | MDR-TB | lineage4.2.1 | None | ERR13260550 | RR-TB | lineage4.1.2 | None | ERR2514503 | MDR-TB | lineage4.3.3 | None | ERR11774907 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773816 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553403 | MDR-TB | None | SRR28888084 | XDR-TB | lineage2.2.1 | None | ERR4830946 | Pre-XDR-TB | lineage4.2.2.2 | np | ERR4811511 | RR-TB | lineage2.2.1 | cn | ERR2707000 | MDR-TB | lineage4.1.2 | cd | ERR11081771 | MDR-TB | lineage4.2.1 | None | ERR7911634 | Pre-XDR-TB | lineage2.2.1;lineage4.4.1.1 | za | SRR16088596 | MDR-TB | lineage4.2.1 | None | ERR2516351 | MDR-TB | lineage4.3.1 | be | ERR10112872 | MDR-TB | lineage2.2.1 | None | SRR27757527 | XDR-TB | lineage2.2.1 | None | ERR4553917 | MDR-TB | lineage4.1.1.1 | None | ERR13292522 | MDR-TB | lineage2.2.1 | None | SRR28045460 | XDR-TB | lineage2.2.1 | None | SRR15600344 | MDR-TB | lineage2.2.1.1 | None | ERR2307581 | MDR-TB | lineage2.2.1 | None | SRR24255957 | MDR-TB | lineage2.2.1 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | ERR5864106 | MDR-TB | lineage2.2.1 | None | ERR4821059 | MDR-TB | lineage4.3.3 | gb | ERR5865922 | MDR-TB | lineage4.2.1 | None | SRR25827792 | XDR-TB | lineage2.2.1 | None | ERR10869439 | MDR-TB | lineage4.3.3 | None | ERR4829167 | XDR-TB | lineage3 | pk | ERR5865768 | MDR-TB | lineage2.2.1 | None | ERR8025551 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120153 | MDR-TB | lineage2.2.1 | None | ERR9120079 | MDR-TB | lineage2.2.1 | None | ERR987756 | MDR-TB | lineage2.2.1 | None | ERR9992781 | XDR-TB | lineage2.2.1 | None | SRR11972392 | MDR-TB | lineage2.2.1 | None | SRR28119759 | Pre-XDR-TB | lineage2.2.1 | None | ERR10877888 | MDR-TB | lineage4.3.3 | None | ERR10877882 | MDR-TB | lineage4.2.1;lineage4.3.3 | None | ERR11082407 | MDR-TB | lineage4.2.1 | None | SRR29096591 | MDR-TB | lineage2.2.1 | None | SRR29539381 | Pre-XDR-TB | lineage2.2.1 | None | SRR15600397 | MDR-TB | lineage2.2.1.1 | None | ERR11068745 | MDR-TB | lineage4.3.3 | None | SRR29772574 | RR-TB | lineage3 | None | SRR29539529 | MDR-TB | lineage2.2.1 | None | SRR29096575 | MDR-TB | lineage3 | None | ERR4872323 | Pre-XDR-TB | lineage4.3.3 | None | ERR13286034 | Pre-XDR-TB | lineage4.3.3 | None | SRR25207196 | MDR-TB | lineage2.2.1 | None | ERR13267015 | XDR-TB | lineage2.2.1 | None | ERR11044690 | MDR-TB | lineage4.2.1 | None | ERR11081857 | MDR-TB | lineage4.2.1 | None | SRR29017631 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR12062518 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR5866114 | MDR-TB | lineage2.2.1 | None | SRR29056142 | MDR-TB | lineage4.3.3 | None | SRR6257071 | Pre-XDR-TB | lineage2.2.1 | None | ERR10877870 | Pre-XDR-TB | lineage4.3.3 | None | SRR10040430 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13284732 | MDR-TB | lineage4.2.1 | None | ERR7737778 | MDR-TB | lineage2.2.1.1 | None | ERR9027229 | MDR-TB | lineage4.3.3 | None | ERR13284316 | MDR-TB | lineage4.2.1 | None | SRR7069851 | Pre-XDR-TB | lineage3 | None | ERR13276298 | MDR-TB | lineage4.2.1 | None | SRR13232697 | Pre-XDR-TB | lineage2.2.1 | None | ERR13292521 | MDR-TB | lineage2.2.1 | None | SRR25207088 | Pre-XDR-TB | lineage2.2.1 | None | SRR7068911 | MDR-TB | lineage4.3.3 | None | ERR5866492 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11081123 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR25515652 | MDR-TB | lineage2.2.1 | None | ERR5987433 | MDR-TB | lineage2.2.1 | None | SRR20969846 | MDR-TB | lineage2.2.1 | None | ERR13284868 | MDR-TB | lineage4.2.1 | None | ERR4800474 | Pre-XDR-TB | lineage1.1.2 | in | ERR10869436 | MDR-TB | lineage4.3.3 | None | ERR4799692 | Pre-XDR-TB | lineage2.2.1 | in | ERR4815303 | MDR-TB | lineage3.1.1 | gb | ERR5865554 | MDR-TB | lineage2.2.1 | None | ERR11081425 | MDR-TB | lineage4.2.1 | None | SRR29385339 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865553 | MDR-TB | lineage2.2.1 | None | ERR13261663 | RR-TB | lineage4.1.2 | None | SRR25827398 | MDR-TB | lineage1.1.2 | None | SRR27757528 | XDR-TB | lineage2.2.1 | None |
|---|
