lineage | Count |
---|---|
lineage4.1.1.3 | 6 |
lineage4.3 | 2 |
lineage2.2.2 | 1 |
lineage4.8 | 5 |
lineage2.2.1.1 | 5 |
lineage4.3.3;lineage4.1.2.1 | 1 |
lineage4.1.2.1 | 15 |
lineage4.1.1 | 1 |
lineage4.3.3 | 1 |
lineage2.1 | 4 |
lineage4.1 | 1 |
lineage2.2.1 | 9 |
lineage4.1.2 | 2 |
lineage4.6.2.2 | 1 |
lineage1.1.3.2 | 1 |
lineage1.2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 56 |
ID | Drug resistance | Lineage | Country iso2 | ERR8025628 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR22175241 | MDR-TB | lineage4.3 | None | ERR9806966 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR21277284 | Pre-XDR-TB | lineage2.2.2 | None | SRR22175211 | MDR-TB | lineage4.8 | None | ERR9806971 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2516905 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR4813700 | MDR-TB | lineage4.3.3;lineage4.1.2.1 | None | ERR4813285 | MDR-TB | lineage4.1.2.1 | pe | ERR4813359 | MDR-TB | lineage4.1.2.1 | None | ERR4813397 | MDR-TB | lineage4.1.2.1 | pe | SRR6797426 | MDR-TB | lineage4.1.1 | None | SRR3732622 | Sensitive | lineage4.3.3 | None | SRR5114021 | Pre-XDR-TB | lineage2.1 | None | ERR4872201 | MDR-TB | lineage4.1 | None | SRR5153319 | MDR-TB | lineage4.8 | None | ERR2515719 | Pre-XDR-TB | lineage2.2.1 | za | SRR5710027 | Pre-XDR-TB | lineage2.1 | th | ERR4872079 | MDR-TB | lineage4.1.2.1 | None | ERR4872203 | MDR-TB | lineage4.1.2 | None | DRR185078 | MDR-TB | lineage2.2.1.1 | vn | ERR4872202 | MDR-TB | lineage4.1.2 | None | ERR502309 | HR-TB | lineage4.6.2.2 | None | SRR7516407 | MDR-TB | lineage4.1.2.1 | None | ERR4799431 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR3273118 | MDR-TB | lineage4.3 | None | ERR4797301 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR067619 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4799475 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4810943 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4800199 | MDR-TB | lineage4.8 | in | ERR4812594 | MDR-TB | lineage4.1.2.1 | pe | ERR751577 | MDR-TB | lineage4.1.2.1 | pe | ERR5866033 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866034 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866061 | MDR-TB | lineage4.8 | None | ERR5866060 | MDR-TB | lineage4.8 | None | ERR7910892 | MDR-TB | lineage4.1.2.1 | pe | ERR779924 | MDR-TB | lineage4.1.2.1 | pe | ERR751632 | MDR-TB | lineage4.1.2.1 | pe | ERR7737892 | MDR-TB | lineage2.2.1 | None | ERR779920 | MDR-TB | lineage4.1.2.1 | pe | ERR7911750 | MDR-TB | lineage4.1.2.1 | us | ERR9119485 | MDR-TB | lineage4.1.2.1 | None | ERR9992656 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119599 | MDR-TB | lineage4.1.2.1 | None | ERR9992872 | Pre-XDR-TB | lineage2.2.1 | None | SRR10185946 | Pre-XDR-TB | lineage2.1 | None | SRR10869161 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR11828989 | Pre-XDR-TB | lineage2.1 | th | SRR10869158 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869164 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR11972243 | Sensitive | lineage1.1.3.2 | None | SRR12142348 | MDR-TB | lineage2.2.1 | None | SRR16370466 | MDR-TB | lineage4.1.2.1 | None | SRR12199423 | HR-TB | lineage1.2.2.2 | None |
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