lineage | Count |
---|---|
lineage4.3.3 | 10 |
lineage1.1.1.1 | 1 |
lineage2.2.1.1 | 2 |
lineage3 | 3 |
lineage3.1.3 | 2 |
lineage2.2.1 | 21 |
lineage4.8 | 7 |
lineage4.3.4.2.1 | 1 |
lineage1.1.2 | 2 |
lineage4.6.1.2 | 5 |
lineage4.6.2.2 | 1 |
lineage4.4.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.5 | 1 |
lineage4.3.2 | 3 |
lineage4.2.2.2 | 1 |
lineage3.1.2.1 | 1 |
lineage2.2.2 | 1 |
lineage3.1.1 | 1 |
lineage4.3.2.1 | 1 |
spoligotype | Count |
---|---|
None | 66 |
ID | Drug resistance | Lineage | Country iso2 | ERR2516435 | MDR-TB | lineage4.3.3 | None | SRR6369876 | MDR-TB | lineage1.1.1.1 | au | SRR5067543 | MDR-TB | lineage2.2.1.1 | vn | ERR4829941 | MDR-TB | lineage3 | pk | ERR7910964 | MDR-TB | lineage4.3.3 | md | ERR2516790 | MDR-TB | lineage3.1.3 | gb | ERR1034717 | MDR-TB | lineage2.2.1 | pe | ERR5918043 | MDR-TB | lineage4.8 | za | ERR688043 | Pre-XDR-TB | lineage4.8 | pk | ERR3287534 | MDR-TB | lineage4.3.3 | None | ERR4798111 | Pre-XDR-TB | lineage4.8 | in | ERR7911574 | Pre-XDR-TB | lineage2.2.1 | za | ERR1034738 | MDR-TB | lineage2.2.1 | pe | SRR5709918 | Pre-XDR-TB | lineage2.2.1 | th | ERR2433011 | MDR-TB | lineage4.3.4.2.1 | None | ERR1213921 | MDR-TB | lineage1.1.2 | cn | ERR2707060 | MDR-TB | lineage4.6.1.2 | cd | ERR2707168 | MDR-TB | lineage4.6.1.2 | cd | ERR4828883 | MDR-TB | lineage4.3.3 | None | ERR2706921 | MDR-TB | lineage4.6.1.2 | cd | ERR4797027 | MDR-TB | lineage1.1.2 | in | ERR4809192 | Pre-XDR-TB | lineage2.2.1 | za | ERR4829984 | MDR-TB | lineage4.6.2.2 | None | ERR4828865 | MDR-TB | lineage4.4.1 | None | ERR1035275 | MDR-TB | lineage4.3.4.2 | br | SRR5709889 | Pre-XDR-TB | lineage2.2.1 | th | ERR2706971 | RR-TB | lineage4.8 | cd | ERR1035079 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911614 | Pre-XDR-TB | lineage2.2.1 | za | ERR4811303 | MDR-TB | lineage2.2.1 | cn | ERR4828827 | MDR-TB | lineage4.5 | None | ERR2516449 | MDR-TB | lineage4.3.3 | None | ERR4812754 | Pre-XDR-TB | lineage4.3.2 | pe | SAMN02414962 | MDR-TB | lineage4.2.2.2 | se | ERR8975016 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034614 | Pre-XDR-TB | lineage3 | pk | ERR4813190 | Pre-XDR-TB | lineage4.3.2 | pe | ERR1199103 | MDR-TB | lineage4.6.1.2 | cd | ERR1034671 | MDR-TB | lineage4.3.3 | co | ERR4799017 | MDR-TB | lineage3.1.2.1 | in | SRR2100368 | MDR-TB | lineage3.1.3 | None | ERR2184397 | MDR-TB | lineage2.2.1 | pe | ERR1213891 | MDR-TB | lineage4.3.3 | co | SRR23691415 | RR-TB | lineage2.2.1 | None | ERR1873527 | Pre-XDR-TB | lineage2.2.1 | za | ERR2516684 | MDR-TB | lineage4.3.3 | None | ERR7911131 | MDR-TB | lineage2.2.1 | vn | ERR3287589 | MDR-TB | lineage2.2.1 | pe | ERR4812150 | MDR-TB | lineage4.3.3 | pe | ERR2516672 | MDR-TB | lineage4.8 | nl | ERR2515301 | Pre-XDR-TB | lineage2.2.1 | za | ERR1199126 | MDR-TB | lineage4.6.1.2 | cd | ERR4800587 | Pre-XDR-TB | lineage3 | in | SAMN02398703 | Pre-XDR-TB | lineage2.2.2 | kr | ERR7911077 | MDR-TB | lineage4.3.3 | md | ERR7911540 | Pre-XDR-TB | lineage2.2.1 | za | ERR4829094 | Pre-XDR-TB | lineage3.1.1 | dj | ERR3287771 | MDR-TB | lineage4.3.2 | pe | ERR234646 | MDR-TB | lineage2.2.1 | ru | ERR4798814 | MDR-TB | lineage2.2.1 | in | ERR1034611 | Pre-XDR-TB | lineage4.8 | pk | ERR7911655 | Pre-XDR-TB | lineage2.2.1 | za | SRR5709797 | Pre-XDR-TB | lineage2.2.1 | th | ERR7911121 | MDR-TB | lineage2.2.1.1 | vn | ERR2515384 | MDR-TB | lineage4.8 | za | ERR4808987 | RR-TB | lineage4.3.2.1 | za |
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