Rv0668 - p.Asn416Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
12 RR-TB
3 HR-TB
205 MDR-TB
83 Pre-XDR-TB
5 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 93 |
| lineage4.8 | 12 |
| lineage4.3.4.2.1 | 18 |
| lineage4.6.1.2 | 12 |
| lineage4.3.2 | 6 |
| lineage4.3.3 | 70 |
| lineage4.2.1.1 | 1 |
| lineage4.6.2.2 | 5 |
| lineage4.2.2.2 | 10 |
| lineage2.2.2 | 13 |
| lineage4.1.1.1 | 3 |
| lineage2.2.1.2 | 1 |
| lineage4.4.1.1 | 10 |
| lineage4.5 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.3.4.2 | 7 |
| lineage3 | 7 |
| lineage2.2.1.1 | 5 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage3.1.3 | 3 |
| lineage1.1.2 | 4 |
| lineage1.2.1.2.1 | 4 |
| lineage2.1 | 4 |
| lineage1.1.1.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.3.2.1 | 3 |
| lineage3.1.1 | 1 |
| lineage1.2.2.1 | 2 |
| 1 | |
| lineage4.4 | 1 |
| lineage4.4.1 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 308 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5987442 | MDR-TB | lineage2.2.1 | None | ERR11082890 | MDR-TB | lineage4.8 | None | SRR11662456 | MDR-TB | lineage2.2.1 | None | ERR11488911 | MDR-TB | lineage4.3.4.2.1 | None | SRR29539566 | MDR-TB | lineage2.2.1 | None | SRR12420325 | MDR-TB | lineage2.2.1 | None | SRR1173372 | MDR-TB | lineage4.6.1.2 | None | ERR13259973 | MDR-TB | lineage4.3.2 | None | ERR4972540 | MDR-TB | lineage4.3.3 | None | ERR13261565 | MDR-TB | lineage4.3.3 | None | SRR28706614 | MDR-TB | lineage4.2.1.1 | None | ERR4872054 | MDR-TB | lineage4.6.2.2 | None | ERR13261945 | MDR-TB | lineage4.3.3 | None | SRR11972191 | MDR-TB | lineage2.2.1 | None | SRR25207308 | MDR-TB | lineage2.2.1 | None | ERR2516435 | MDR-TB | lineage4.3.3 | None | ERR4972523 | MDR-TB | lineage4.3.3 | None | SRR1174312 | MDR-TB | lineage4.6.1.2 | None | SRR20632803 | MDR-TB | lineage2.2.1 | None | SRR1165432 | MDR-TB | lineage4.2.2.2 | None | SRR24709985 | MDR-TB | lineage2.2.1 | None | ERR13284624 | MDR-TB | lineage2.2.2 | None | SRR6832781 | MDR-TB | lineage4.3.3 | None | SRR29094456 | MDR-TB | lineage4.3.3 | None | ERR2653076 | MDR-TB | lineage4.1.1.1 | None | ERR4827571 | RR-TB | lineage2.2.1 | None | SRR29094467 | MDR-TB | lineage4.3.3 | None | ERR4800692 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813702 | MDR-TB | lineage4.3.3 | None | ERR4811363 | Pre-XDR-TB | lineage2.2.1 | None | SRR29094391 | MDR-TB | lineage4.3.3 | None | SRR21747011 | RR-TB | lineage2.2.2 | None | SRR29096520 | Pre-XDR-TB | lineage2.2.1 | None | SRR29081665 | Pre-XDR-TB | lineage4.3.3 | None | SRR13870390 | Pre-XDR-TB | lineage4.3.3 | None | SRR29772412 | MDR-TB | lineage2.2.1.2 | None | ERR11488408 | MDR-TB | lineage4.3.4.2.1 | None | SRR29081580 | MDR-TB | lineage4.3.3 | None | ERR4011081 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488671 | Pre-XDR-TB | lineage4.3.4.2.1 | None | SRR26937077 | MDR-TB | lineage2.2.1 | None | SRR6789616 | MDR-TB | lineage4.4.1.1 | None | SRR21576596 | RR-TB | lineage4.5 | None | ERR5987313 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260653 | MDR-TB | lineage4.3.3 | None | SRR28859860 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR18054793 | Pre-XDR-TB | lineage2.2.2 | None | SRR13232736 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017694 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR13290581 | MDR-TB | lineage4.2.2.2 | None | SRR29289389 | XDR-TB | lineage4.2.2.2 | None | SRR29289392 | Pre-XDR-TB | lineage3 | None | SRR29289111 | XDR-TB | lineage3 | None | ERR13290578 | MDR-TB | lineage4.2.2.2 | None | SRR29017359 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4798111 | Pre-XDR-TB | lineage4.8 | in | SRR15600366 | MDR-TB | lineage2.2.1.1 | None | SRR29094418 | MDR-TB | lineage4.3.3 | None | ERR13261564 | MDR-TB | lineage4.3.3 | None | ERR4812754 | Pre-XDR-TB | lineage4.3.2 | pe | ERR13191363 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR12420715 | MDR-TB | lineage2.2.1 | None | ERR3287534 | MDR-TB | lineage4.3.3 | None | SRR28706677 | MDR-TB | lineage2.2.1 | None | SRR28393343 | MDR-TB | lineage4.4.1.1 | None | ERR4813190 | Pre-XDR-TB | lineage4.3.2 | pe | ERR5918043 | MDR-TB | lineage4.8 | za | ERR4407544 | MDR-TB | lineage4.1.2.1 | None | SRR17657962 | MDR-TB | lineage4.3.3 | None | SRR1163208 | MDR-TB | lineage4.2.2.2 | None | SRR12420759 | RR-TB | lineage2.2.1 | None | SRR2100368 | MDR-TB | lineage3.1.3 | None | ERR4553943 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR10610169 | Pre-XDR-TB | lineage2.2.1 | None | ERR11489037 | MDR-TB | lineage4.3.4.2.1 | None | SRR29231676 | MDR-TB | lineage4.6.1.2 | None | ERR1213921 | MDR-TB | lineage1.1.2 | cn | ERR11773729 | Pre-XDR-TB | lineage2.2.1 | None | ERR11466004 | MDR-TB | lineage4.4.1.1 | None | ERR2433011 | MDR-TB | lineage4.3.4.2.1 | None | ERR11488555 | MDR-TB | lineage4.3.4.2.1 | None | SRR1163201 | MDR-TB | lineage4.2.2.2 | None | ERR8025723 | Pre-XDR-TB | lineage2.2.1 | None | ERR11466515 | MDR-TB | lineage4.4.1.1 | None | SRR4423161 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125454 | MDR-TB | lineage1.2.1.2.1 | None | ERR13291676 | MDR-TB | lineage1.2.1.2.1 | None | SRR25207040 | MDR-TB | lineage2.2.1 | None | ERR3132171 | MDR-TB | lineage1.1.2 | None | ERR7362046 | MDR-TB | lineage1.1.2 | None | SRR10828645 | MDR-TB | lineage2.1 | None | ERR11488749 | MDR-TB | lineage4.3.4.2.1 | None | SRR21722105 | MDR-TB | lineage1.2.1.2.1 | None | SRR16156790 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291055 | RR-TB | lineage2.2.2 | None | SRR7232581 | MDR-TB | lineage1.1.1.1 | None | ERR4972494 | MDR-TB | lineage4.3.3 | None | ERR11488565 | MDR-TB | lineage4.3.4.2.1 | None | SRR20969506 | MDR-TB | lineage2.2.1 | None | ERR3509860 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR11466477 | MDR-TB | lineage4.4.1.1 | None | ERR13264937 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR29017080 | MDR-TB | lineage4.1.1.1 | None | SRR29081658 | MDR-TB | lineage4.3.3 | None | ERR13261589 | MDR-TB | lineage4.3.3 | None | SRR11662277 | Pre-XDR-TB | lineage2.1 | None | SRR29094408 | MDR-TB | lineage4.3.3 | None | SRR29081614 | MDR-TB | lineage4.3.3 | None | SRR29094404 | MDR-TB | lineage4.3.3 | None | ERR4972557 | Pre-XDR-TB | lineage4.3.3 | None | ERR4972513 | MDR-TB | lineage4.3.3 | None | ERR688046 | Pre-XDR-TB | lineage3 | None | SRR13870370 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167131 | MDR-TB | lineage4.2.2.2 | None | SRR11662374 | MDR-TB | lineage4.3.3 | None | ERR3132134 | MDR-TB | lineage4.3.3 | None | SRR24256072 | MDR-TB | lineage4.3.3 | None | SRR28860194 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4972506 | MDR-TB | lineage4.3.3 | None | SRR28859862 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR6879032 | MDR-TB | lineage2.2.1 | None | SRR29231320 | MDR-TB | lineage4.6.1.2 | None | SRR16370526 | MDR-TB | lineage2.2.1 | None | SRR29081569 | MDR-TB | lineage4.3.3 | None | ERR9119464 | MDR-TB | lineage4.6.2.2 | None | ERR5866500 | MDR-TB | lineage2.2.1 | None | SRR29081613 | MDR-TB | lineage4.3.3 | None | ERR13290580 | MDR-TB | lineage4.2.2.2 | None | ERR1035079 | Pre-XDR-TB | lineage2.2.1 | za | SRR28351329 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290579 | MDR-TB | lineage4.2.2.2 | None | SRR29081619 | MDR-TB | lineage4.3.3 | None | SRR29081659 | MDR-TB | lineage4.3.3 | None | SRR29081624 | MDR-TB | lineage4.3.3 | None | SRR1144796 | Pre-XDR-TB | lineage2.2.2 | None | ERR11043495 | MDR-TB | lineage2.2.2 | None | SRR5535831 | MDR-TB | lineage4.6.2.2 | None | SRR29093260 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420808 | MDR-TB | lineage2.2.1 | None | SRR29093610 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610058 | HR-TB | lineage2.2.1 | None | SRR12420669 | HR-TB | lineage2.2.1 | None | ERR4829941 | MDR-TB | lineage3 | pk | SRR5535925 | MDR-TB | lineage4.4.1.1 | None | ERR688043 | Pre-XDR-TB | lineage4.8 | pk | SRR6964604 | Pre-XDR-TB | lineage4.8 | None | ERR11466114 | MDR-TB | lineage4.4.1.1 | None | SRR29289235 | XDR-TB | lineage3 | None | SRR29093334 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799017 | MDR-TB | lineage3.1.2.1 | in | SRR29081621 | MDR-TB | lineage4.3.3 | None | ERR4972517 | MDR-TB | lineage4.3.3 | None | ERR4800587 | Pre-XDR-TB | lineage3 | in | ERR117717 | MDR-TB | lineage3.1.3 | None | SRR22249954 | MDR-TB | lineage2.2.2 | None | ERR4808987 | RR-TB | lineage4.3.2.1 | za | ERR11044708 | MDR-TB | lineage2.2.1 | None | ERR11488566 | MDR-TB | lineage4.3.4.2.1 | None | ERR3287771 | MDR-TB | lineage4.3.2 | pe | ERR4809192 | Pre-XDR-TB | lineage2.2.1 | za | ERR7910964 | MDR-TB | lineage4.3.3 | md | ERR1034611 | Pre-XDR-TB | lineage4.8 | pk | ERR1034614 | Pre-XDR-TB | lineage3 | pk | ERR2516449 | MDR-TB | lineage4.3.3 | None | ERR2516684 | MDR-TB | lineage4.3.3 | None | ERR7911121 | MDR-TB | lineage2.2.1.1 | vn | ERR2706971 | RR-TB | lineage4.8 | cd | ERR7911614 | Pre-XDR-TB | lineage2.2.1 | za | ERR4829094 | Pre-XDR-TB | lineage3.1.1 | dj | ERR11489038 | MDR-TB | lineage4.3.4.2.1 | None | SRR29772468 | MDR-TB | lineage1.2.2.1 | None | ERR7911077 | MDR-TB | lineage4.3.3 | md | ERR5897103 | XDR-TB | lineage4.8 | None | SRR11662497 | MDR-TB | lineage2.2.1 | None | SRR25207140 | RR-TB | lineage2.2.1 | None | ERR1034671 | MDR-TB | lineage4.3.3 | co | ERR1199103 | MDR-TB | lineage4.6.1.2 | cd | ERR1199126 | MDR-TB | lineage4.6.1.2 | cd | ERR2707168 | MDR-TB | lineage4.6.1.2 | cd | ERR1873527 | Pre-XDR-TB | lineage2.2.1 | za | ERR2515384 | MDR-TB | lineage4.8 | za | SRR7796667 | Pre-XDR-TB | lineage2.2.2 | None | SRR29081577 | MDR-TB | lineage4.3.3 | None | SRR29093682 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034738 | MDR-TB | lineage2.2.1 | pe | SRR26331601 | RR-TB | lineage4.3.2.1 | None | ERR6879019 | MDR-TB | lineage2.2.1 | None | SRR18054777 | Pre-XDR-TB | lineage2.2.1 | None | SRR29081664 | Pre-XDR-TB | lineage4.3.3 | None | SRR5067543 | MDR-TB | lineage2.2.1.1 | vn | SRR25207325 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748456 | MDR-TB | lineage2.2.2 | None | SRR21887757 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465581 | MDR-TB | lineage4.4.1.1 | None | ERR6662371 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR13289044 | MDR-TB | lineage2.2.1 | None | ERR13289024 | MDR-TB | lineage2.2.2 | None | ERR13286045 | RR-TB | lineage4.3.2.1 | None | ERR4553618 | MDR-TB | None | SRR10040165 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420457 | MDR-TB | lineage2.2.1 | None | SRR24256071 | MDR-TB | lineage4.3.3 | None | ERR11081550 | MDR-TB | lineage2.2.2 | None | SRR7796668 | Pre-XDR-TB | lineage2.2.2 | None | ERR11081495 | MDR-TB | lineage4.6.2.2 | None | SRR10040407 | MDR-TB | lineage2.2.1 | None | SRR26331656 | MDR-TB | lineage2.2.1 | None | SRR25206943 | MDR-TB | lineage2.2.1 | None | SRR29094457 | MDR-TB | lineage4.3.3 | None | SRR30180215 | MDR-TB | lineage2.2.1 | None | SRR29231739 | MDR-TB | lineage4.6.1.2 | None | SRR29081668 | MDR-TB | lineage4.3.3 | None | SRR29772668 | MDR-TB | lineage1.2.2.1 | None | ERR11488488 | MDR-TB | lineage4.3.4.2.1 | None | ERR11050947 | MDR-TB | lineage2.2.1 | None | SRR29081582 | MDR-TB | lineage4.3.3 | None | SRR29081571 | Pre-XDR-TB | lineage4.3.3 | None | SRR29094394 | MDR-TB | lineage4.3.3 | None | SRR28351176 | RR-TB | lineage2.2.1.1 | None | SRR29094429 | MDR-TB | lineage4.3.3 | None | SRR26331662 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488724 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR11488728 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR4813136 | Pre-XDR-TB | lineage4.3.2 | None | SRR26331659 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119815 | MDR-TB | lineage2.2.1 | None | SRR29094016 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260413 | Pre-XDR-TB | lineage4.3.3 | None | SRR25827858 | MDR-TB | lineage4.3.3 | None | SRR10828205 | Pre-XDR-TB | lineage2.2.1 | None | ERR4972576 | MDR-TB | lineage4.3.3 | None | ERR13284679 | MDR-TB | lineage4.8 | None | SRR23691415 | RR-TB | lineage2.2.1 | None | SRR29081628 | MDR-TB | lineage4.3.3 | None | ERR4972537 | MDR-TB | lineage4.3.3 | None | ERR1035275 | MDR-TB | lineage4.3.4.2 | br | ERR4972518 | MDR-TB | lineage4.3.3 | None | ERR16022323 | XDR-TB | lineage4.8 | None | SRR10040376 | MDR-TB | lineage2.2.1 | None | SRR29385391 | Pre-XDR-TB | lineage2.2.1 | None | SRR29094478 | MDR-TB | lineage4.3.3 | None | SRR24256280 | MDR-TB | lineage4.3.3 | None | ERR4972558 | MDR-TB | lineage4.3.3 | None | SRR29016874 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR3509859 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR11488554 | MDR-TB | lineage4.3.4.2.1 | None | ERR12311996 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR21576671 | MDR-TB | lineage2.2.1 | None | ERR4798814 | MDR-TB | lineage2.2.1 | in | ERR4812150 | MDR-TB | lineage4.3.3 | pe | SRR24710085 | MDR-TB | lineage2.2.1 | None | ERR4972531 | MDR-TB | lineage4.3.3 | None | SAMN02414962 | MDR-TB | lineage4.2.2.2 | se | SAMN02398703 | Pre-XDR-TB | lineage2.2.2 | kr | ERR11776001 | MDR-TB | lineage4.3.3 | None | SRR28119734 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044344 | Pre-XDR-TB | lineage4.4 | None | ERR3287589 | MDR-TB | lineage2.2.1 | pe | ERR7911131 | MDR-TB | lineage2.2.1 | vn | ERR7911540 | Pre-XDR-TB | lineage2.2.1 | za | ERR4828827 | MDR-TB | lineage4.5 | None | ERR4828883 | MDR-TB | lineage4.3.3 | None | ERR4829984 | MDR-TB | lineage4.6.2.2 | None | ERR7911574 | Pre-XDR-TB | lineage2.2.1 | za | ERR4811303 | MDR-TB | lineage2.2.1 | cn | ERR2707060 | MDR-TB | lineage4.6.1.2 | cd | ERR2706921 | MDR-TB | lineage4.6.1.2 | cd | ERR4828865 | MDR-TB | lineage4.4.1 | None | ERR7911655 | Pre-XDR-TB | lineage2.2.1 | za | ERR9806717 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806777 | HR-TB | lineage2.2.1 | None | SRR10828639 | Pre-XDR-TB | lineage2.1 | None | ERR234646 | MDR-TB | lineage2.2.1 | ru | ERR2516790 | MDR-TB | lineage3.1.3 | gb | ERR2516672 | MDR-TB | lineage4.8 | nl | SRR5709797 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709918 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709889 | Pre-XDR-TB | lineage2.2.1 | th | SRR6369876 | MDR-TB | lineage1.1.1.1 | au | ERR1654675 | MDR-TB | lineage4.6.1.2 | None | ERR1034717 | MDR-TB | lineage2.2.1 | pe | SRR10828625 | MDR-TB | lineage4.3.3 | None | ERR13260515 | MDR-TB | lineage4.3.2 | None | SRR30180364 | MDR-TB | lineage2.2.1 | None | SRR20969472 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040348 | MDR-TB | lineage2.2.1 | None | ERR2653140 | MDR-TB | lineage4.3.4.1 | None | ERR4553906 | MDR-TB | lineage2.2.1 | None | ERR4972571 | MDR-TB | lineage4.3.3 | None | ERR1213891 | MDR-TB | lineage4.3.3 | co | SRR6832140 | MDR-TB | lineage4.3.3 | None | ERR4972556 | MDR-TB | lineage4.3.3 | None | ERR4972512 | MDR-TB | lineage4.3.3 | None | ERR403247 | MDR-TB | lineage2.2.1 | None | ERR11465567 | MDR-TB | lineage4.4.1.1 | None | ERR9806979 | Pre-XDR-TB | lineage2.2.1 | None | ERR1654697 | MDR-TB | lineage4.6.1.2 | None | ERR4797027 | MDR-TB | lineage1.1.2 | in | SRR11662289 | MDR-TB | lineage2.1 | None | ERR8975016 | Pre-XDR-TB | lineage2.2.1 | None | ERR2184397 | MDR-TB | lineage2.2.1 | pe | ERR11488834 | MDR-TB | lineage4.3.4.2.1 | None | SRR23938644 | MDR-TB | lineage2.2.1 | None | SRR16156805 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10808621 | MDR-TB | lineage2.2.1 | None | ERR11488995 | MDR-TB | lineage4.3.4.2.1 | None | ERR11465988 | MDR-TB | lineage4.4.1.1 | None | SRR16058724 | MDR-TB | lineage1.2.1.2.1 | None |
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