SAMN02419535
|
MDR-TB
|
lineage2.2.1
|
by
|
SRR2024935
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR4796383
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR26399530
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28045561
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2516989
|
MDR-TB
|
lineage3.1
|
gb
|
SRR29356796
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2517043
|
MDR-TB
|
lineage3
|
gb
|
SRR22175214
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1723498
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR11081308
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11043447
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798269
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796968
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4798080
|
MDR-TB
|
lineage2.2.1
|
in
|
SRR10305961
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797864
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4796816
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
SRR28741139
|
MDR-TB
|
lineage4.5
|
None
|
ERR4796937
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR5817462
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR7911519
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR9027257
|
MDR-TB
|
lineage4.8
|
None
|
SRR6824312
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR4830916
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
SRR9738502
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR29055928
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR28741137
|
MDR-TB
|
lineage4.5
|
None
|
SRR28351572
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR551467
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1181069
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4799937
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR1181206
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22424820
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1159167
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1181141
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4796771
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799964
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4798633
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR6484901
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351363
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1034596
|
Pre-XDR-TB
|
lineage3
|
pk
|
SRR29053219
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4831497
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR11082352
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10610150
|
MDR-TB
|
lineage4.8
|
None
|
ERR4830439
|
MDR-TB
|
lineage2.2.1
|
vn
|
SRR28741149
|
MDR-TB
|
lineage4.5
|
None
|
SRR28741145
|
MDR-TB
|
lineage4.5
|
None
|
ERR2020086
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4797651
|
MDR-TB
|
lineage2.2.1
|
in
|
SRR22424822
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827530
|
XDR-TB
|
lineage2.2.1;lineage4
|
None
|
SRR29289383
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR13266749
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4800551
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800567
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800537
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR28044655
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4799794
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR13284065
|
MDR-TB
|
lineage4.8
|
None
|
ERR13266106
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13276258
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR688044
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR133922
|
MDR-TB
|
lineage4.3.3
|
ru
|
ERR2517073
|
MDR-TB
|
lineage4.6.2.2
|
gb
|
ERR10610361
|
MDR-TB
|
lineage4.8
|
None
|
ERR13266517
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR11033729
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13870364
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR24256051
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4796608
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR13266717
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4798286
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4797545
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR6356957
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21277222
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR551467_ERR551466
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9119437
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9120040
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798044
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4800193
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR26112471
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4798744
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800478
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800563
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR7592375
|
RR-TB
|
lineage4.8
|
None
|
SRR27069367
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR13261373
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13266092
|
Pre-XDR-TB
|
lineage2.2.1;lineage4
|
None
|
SRR28044338
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13261289
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4799436
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR13245219
|
MDR-TB
|
lineage4.2.2
|
None
|
ERR13261387
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2516923
|
MDR-TB
|
lineage3
|
gb
|
SRR28045253
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1181110
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1181153
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR15723202
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11488656
|
Pre-XDR-TB
|
lineage4.9.1
|
None
|
ERR4800291
|
XDR-TB
|
lineage2.2.1
|
in
|
ERR4800221
|
HR-TB
|
lineage1.1.2;lineage2.2.1
|
in
|
ERR9120039
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR2100848
|
MDR-TB
|
lineage3.1
|
None
|
ERR5987287
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827781
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4799246
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR22251727
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1722867
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR22175244
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13266736
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29914427
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4423570
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865145
|
MDR-TB
|
lineage4.8
|
None
|
SRR1159075
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29914428
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1181114
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4796256
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR3275716
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
ERR9119710
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29055696
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR12420390
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4799819
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4797711
|
Pre-XDR-TB
|
lineage1.2.2.2;lineage2.2.1
|
in
|
ERR5865144
|
MDR-TB
|
lineage4.8
|
None
|
ERR270746
|
MDR-TB
|
lineage3.1
|
None
|
ERR3148199
|
MDR-TB
|
lineage4.3.3
|
mx
|
ERR3273178
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR25827570
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10610079
|
RR-TB
|
lineage2.2.1.1
|
None
|
ERR2677453
|
MDR-TB
|
lineage4.6.2.2
|
de
|
SRR2100246
|
MDR-TB
|
lineage3.1
|
None
|
ERR11080912
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1180944
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1159298
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4383951
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR11081310
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28741155
|
MDR-TB
|
lineage4.5
|
None
|
ERR4831442
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4831598
|
MDR-TB
|
lineage2.2.1.1
|
vn
|
ERR4830958
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
SRR21690946
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR21675696
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22175222
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4796850
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799591
|
MDR-TB
|
lineage2.2.1
|
in
|
SRR6458414
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1723452
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28646057
|
RR-TB
|
lineage4.8
|
None
|
SRR28046161
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827565
|
Pre-XDR-TB
|
lineage1.2.2.2;lineage2.2.1
|
None
|
SRR1159005
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28170790
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27069380
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045926
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2510861
|
MDR-TB
|
lineage3
|
pk
|
ERR4798421
|
MDR-TB
|
lineage2.2.1
|
in
|
SRR29772470
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28741140
|
MDR-TB
|
lineage4.5
|
None
|
ERR4830978
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
SRR12420354
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12420649
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827731
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827851
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13292507
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4796906
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR16156776
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29772555
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR16156692
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR671781
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR4799652
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
SRR25827294
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR13266547
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22424755
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4797508
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4798281
|
XDR-TB
|
lineage2.2.1
|
in
|
SRR15014722
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR25827786
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4797326
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4827968
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29055664
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR27069433
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13285205
|
Other
|
lineage4.1.1.3
|
None
|
ERR1034583
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR4276856
|
MDR-TB
|
lineage4.8
|
None
|
ERR4799529
|
XDR-TB
|
lineage2.2.1
|
in
|
SRR25515845
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SAMN02419559
|
MDR-TB
|
lineage2.2.1
|
by
|
SRR28389847
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR22424749
|
RR-TB
|
lineage1.1.2
|
None
|
SRR10040261
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28741135
|
MDR-TB
|
lineage4.5
|
None
|
SRR28741134
|
MDR-TB
|
lineage4.5
|
None
|
ERR4797702
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796893
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR6824689
|
MDR-TB
|
lineage2.2.1.1
|
cn
|
ERR4811468
|
MDR-TB
|
lineage2.2.1.2
|
cn
|
ERR4797419
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR16156690
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13290878
|
HR-TB
|
lineage1.1.2;lineage2.2.1
|
None
|
ERR4796506
|
Pre-XDR-TB
|
lineage3.1.2.1
|
in
|
ERR7975667
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4796424
|
XDR-TB
|
lineage2.2.1
|
in
|
ERR4799362
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799490
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4798425
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR5865728
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798134
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR13260014
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4797102
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR25827519
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR27069383
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9119982
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827509
|
MDR-TB
|
lineage2.2.1;lineage3;lineage4.3.2
|
None
|
SRR28119828
|
MDR-TB
|
lineage4.5
|
None
|
SRR24710020
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798786
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR25827448
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28741148
|
MDR-TB
|
lineage4.5
|
None
|
ERR4810930
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR21277292
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9634282
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4798017
|
XDR-TB
|
lineage2.2.1
|
in
|
ERR551466
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR671812
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR10040134
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9806668
|
MDR-TB
|
lineage4.8
|
None
|
SRR25827327
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827475
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4796820
|
XDR-TB
|
lineage2.2.1
|
in
|
SRR28741147
|
MDR-TB
|
lineage4.5
|
None
|
ERR4800360
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796481
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11082128
|
MDR-TB
|
lineage4.8
|
None
|
ERR3275727
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
ERR4812877
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21887780
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR25515571
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1034612
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR4796378
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR15723245
|
MDR-TB
|
lineage4.5
|
None
|
SRR28741156
|
MDR-TB
|
lineage4.5
|
None
|
ERR9806657
|
RR-TB
|
lineage2.2.1.1
|
None
|
ERR4800349
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR25534517
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4798129
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4831023
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
SRR21887687
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4800292
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4822309
|
MDR-TB
|
lineage4.8
|
de
|
SRR10040418
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865143
|
MDR-TB
|
lineage4.8
|
None
|
SRR25827868
|
Pre-XDR-TB
|
lineage2.2.1;lineage3.1.2
|
None
|
ERR5987200
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827408
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6458435
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13262000
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13267059
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4800392
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR5865727
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22424839
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1181095
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5486903
|
RR-TB
|
lineage4.8
|
None
|
ERR4797794
|
MDR-TB
|
lineage2.2.1
|
in
|
SRR28706685
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR688015
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4798868
|
Pre-XDR-TB
|
lineage2.2.1;lineage4
|
in
|
SRR1723708
|
MDR-TB
|
lineage2.2.1.1
|
cn
|
ERR6052020
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4828091
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11082149
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28351380
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28706525
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28394295
|
MDR-TB
|
lineage4.1.2
|
None
|
SRR25827752
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28741152
|
MDR-TB
|
lineage4.5
|
None
|
SRR28741153
|
MDR-TB
|
lineage4.5
|
None
|
SRR29440807
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR28741136
|
MDR-TB
|
lineage4.5
|
None
|
SRR28741142
|
MDR-TB
|
lineage4.5
|
None
|
SRR28741151
|
MDR-TB
|
lineage4.5
|
None
|
SRR28741150
|
MDR-TB
|
lineage4.5
|
None
|
SRR25207159
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4811239
|
RR-TB
|
lineage2.2.1
|
None
|
SRR28045810
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16100721
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662156
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1162532
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02419543
|
MDR-TB
|
lineage2.2.1
|
by
|
ERR4830940
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
SRR27069419
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13284841
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4423569
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29772510
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
ERR4796659
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR28351477
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4830982
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
ERR8774567
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798242
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799873
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR688028
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR22424818
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13266797
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13267031
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29385351
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16156732
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4796628
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796743
|
Pre-XDR-TB
|
lineage1.2.2.2;lineage2.2.1
|
in
|
SRR1159359
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12420310
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4796700
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR25827622
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR24256292
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13284778
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797939
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4812883
|
MDR-TB
|
lineage4.9
|
pe
|
ERR4830981
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
ERR3794547
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8774258
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2515325
|
MDR-TB
|
lineage2.2.1
|
za
|
ERR5987302
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13266627
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR671727
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR25207396
|
RR-TB
|
lineage2.2.1
|
None
|
SAMN03246216
|
MDR-TB
|
lineage2.2.1
|
cn
|
SAMN02419586
|
MDR-TB
|
lineage2.2.1
|
by
|
ERR11488668
|
Pre-XDR-TB
|
lineage4.9.1
|
None
|
ERR13284700
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMEA2533962
|
MDR-TB
|
lineage2.2.1
|
uz
|
SRR25827298
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR28741146
|
MDR-TB
|
lineage4.5
|
None
|
ERR4830663
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
ERR11043689
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR4796269
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9806691
|
MDR-TB
|
lineage4.8
|
None
|
ERR10225529
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR117683
|
MDR-TB
|
lineage3.1
|
None
|
ERR4797556
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR13291944
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4810478
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR25827627
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4796995
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR13261979
|
HR-TB
|
lineage2.2.1
|
None
|
ERR7911194
|
MDR-TB
|
lineage2.2.1
|
za
|
ERR4796627
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR5709768
|
MDR-TB
|
lineage2.2.1
|
th
|
ERR4797789
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR25827401
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21277276
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25206967
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13260024
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29052911
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827375
|
Pre-XDR-TB
|
lineage1.2.2.2;lineage2.2.1
|
None
|
SRR28741138
|
MDR-TB
|
lineage4.5
|
None
|
ERR4796730
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4797394
|
Pre-XDR-TB
|
lineage4.8
|
in
|
SRR10040421
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6052091
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4831651
|
MDR-TB
|
lineage2.2.1
|
vn
|