lineage | Count |
---|---|
lineage2.2.1 | 53 |
lineage3 | 23 |
lineage4.3.3 | 3 |
lineage4.1.2.1 | 6 |
lineage4.3.4.1 | 2 |
lineage4.8 | 1 |
lineage2.2 | 1 |
lineage1.1.2 | 18 |
2 | |
lineage4.2.2.2 | 2 |
lineage4.9 | 1 |
lineage4.4.2 | 1 |
lineage3.1.2 | 1 |
lineage4.5 | 1 |
lineage4.1.4 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 117 |
ID | Drug resistance | Lineage | Country iso2 | SRR5065610 | MDR-TB | lineage2.2.1 | vn | ERR2041934 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516539 | MDR-TB | lineage2.2.1 | nl | ERR2510426 | Pre-XDR-TB | lineage3 | pk | SAMEA2534676 | MDR-TB | lineage2.2.1 | kz | SRR5152948 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516955 | Pre-XDR-TB | lineage4.3.3 | gb | SRR5266547 | MDR-TB | lineage2.2.1 | ru | SRR5486902 | MDR-TB | lineage4.1.2.1 | None | SRR5266548 | MDR-TB | lineage2.2.1 | ru | ERR2516177 | MDR-TB | lineage2.2.1 | be | ERR2517040 | Pre-XDR-TB | lineage4.3.3 | gb | ERR2516658 | MDR-TB | lineage4.1.2.1 | pe | ERR2653185 | MDR-TB | lineage4.3.4.1 | None | ERR2653225 | MDR-TB | lineage4.8 | None | ERR4827954 | MDR-TB | lineage2.2.1 | None | SRR23310957 | MDR-TB | lineage2.2 | None | ERR4827440 | MDR-TB | lineage2.2.1 | None | ERR4822298 | MDR-TB | lineage3 | None | ERR4827558 | MDR-TB | lineage2.2.1 | None | SRR5817476 | Pre-XDR-TB | lineage1.1.2 | None | SRR5818576 | MDR-TB | lineage1.1.2 | dj | SRR5817477 | Pre-XDR-TB | lineage1.1.2 | None | SRR5818575 | MDR-TB | lineage1.1.2 | dj | ERR4828084 | MDR-TB | lineage2.2.1 | None | SRR5818697 | MDR-TB | lineage1.1.2 | dj | SRR5818695 | MDR-TB | lineage1.1.2 | dj | ERR4828787 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830808 | Pre-XDR-TB | lineage1.1.2 | et | ERR4830841 | Pre-XDR-TB | lineage1.1.2 | et | ERR4828774 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828779 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829095 | Pre-XDR-TB | lineage1.1.2 | dj | ERR4830783 | Pre-XDR-TB | lineage1.1.2 | et | ERR4830791 | Pre-XDR-TB | lineage1.1.2 | et | SRR6257087 | MDR-TB | lineage2.2.1 | ru | SRR6256988 | MDR-TB | lineage2.2.1 | None | SRR6832129 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831957 | MDR-TB | lineage2.2.1 | vn | SRR6832545 | MDR-TB | lineage4.1.2.1 | None | SRR6807681 | MDR-TB | lineage2.2.1 | None | SRR6824446 | RR-TB | lineage2.2.1 | cn | ERR4831886 | MDR-TB | lineage2.2.1 | vn | SAMEA2534261 | MDR-TB | lineage2.2.1 | uz | ERR502922 | MDR-TB | lineage2.2.1 | None | ERR4831898 | MDR-TB | lineage2.2.1 | None | ERR4831931 | MDR-TB | lineage2.2.1 | vn | ERR1035322 | MDR-TB | lineage4.3.4.1 | br | SRR7781513 | Pre-XDR-TB | lineage2.2.1 | None | ERR137218 | MDR-TB | lineage2.2.1 | ru | ERR1035340 | MDR-TB | lineage4.1.2.1 | br | ERR108428 | MDR-TB | lineage2.2.1 | ru | ERR11043829 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044151 | MDR-TB | lineage2.2.1 | None | ERR11044152 | MDR-TB | lineage2.2.1 | None | ERR144550 | RR-TB | lineage2.2.1 | ru | ERR4811999 | MDR-TB | lineage4.1.2.1 | pe | ERR4276901 | MDR-TB | lineage3 | None | ERR4553476 | MDR-TB | None | ERR4553553 | MDR-TB | None | ERR4797930 | MDR-TB | lineage3 | in | ERR4800503 | MDR-TB | lineage3 | in | ERR4798575 | MDR-TB | lineage3 | in | ERR4800211 | MDR-TB | lineage3 | in | ERR8975640 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737851 | MDR-TB | lineage4.2.2.2 | None | ERR7737906 | MDR-TB | lineage4.2.2.2 | None | ERR7975664 | MDR-TB | lineage2.2.1 | None | ERR7975686 | MDR-TB | lineage4.3.3 | None | ERR9119816 | RR-TB | lineage3 | None | ERR9119749 | RR-TB | lineage3 | None | ERR9119786 | RR-TB | lineage3 | None | ERR9119753 | RR-TB | lineage3 | None | ERR9120107 | RR-TB | lineage3 | None | ERR9119923 | RR-TB | lineage3 | None | ERR9120108 | RR-TB | lineage3 | None | ERR9992852 | Pre-XDR-TB | lineage2.2.1 | None | SRR023429 | Sensitive | lineage4.9 | None | SRR10380042 | MDR-TB | lineage2.2.1 | None | SRR10380110 | Pre-XDR-TB | lineage2.2.1 | None | SRR10525375 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR12882079 | RR-TB | lineage3 | None | SRR11786867 | MDR-TB | lineage2.2.1 | None | SRR12882080 | RR-TB | lineage3 | None | SRR15316196 | RR-TB | lineage4.4.2 | None | SRR12882084 | RR-TB | lineage3 | None | SRR12882608 | RR-TB | lineage3 | None | SRR14801694 | Pre-XDR-TB | lineage2.2.1 | None | SRR12882083 | RR-TB | lineage3 | None | SRR12882081 | RR-TB | lineage3 | None | SRR15014650 | MDR-TB | lineage3.1.2 | None | SRR15014745 | RR-TB | lineage4.5 | None | SRR20632826 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316442 | RR-TB | lineage2.2.1 | None | SRR19276616 | RR-TB | lineage4.1.4 | None | SRR15901693 | Pre-XDR-TB | lineage2.2.1 | None | SRR15901694 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714800 | MDR-TB | lineage2.2.1 | None | SRR19304023 | MDR-TB | lineage3 | None | SRR20632800 | RR-TB | lineage2.2.1 | None | SRR22424929 | MDR-TB | lineage3 | None | SRR21276921 | RR-TB | lineage2.2.1 | None | SRR22048331 | MDR-TB | lineage3 | None | ERR4813751 | MDR-TB | lineage4.1.1.3 | br | SRR23862154 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938639 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243557 | Pre-XDR-TB | lineage2.2.1 | None | SRR3082075 | MDR-TB | lineage1.1.2 | None | SRR3085310 | Pre-XDR-TB | lineage1.1.2 | None | SRR3082094 | Pre-XDR-TB | lineage1.1.2 | None | SRR3082074 | MDR-TB | lineage1.1.2 | None | SRR3085274 | MDR-TB | lineage2.2.1 | None | SRR3085309 | MDR-TB | lineage1.1.2 | None | SRR3085311 | Pre-XDR-TB | lineage1.1.2 | None | SRR3743373 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085312 | Pre-XDR-TB | lineage1.1.2 | None | SRR3086358 | MDR-TB | lineage2.2.1 | None |
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