Rv0668 - p.Gly519Asp
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
19 RR-TB
1 HR-TB
108 MDR-TB
55 Pre-XDR-TB
5 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 20 |
| lineage2.2.1 | 78 |
| lineage2.2.1.1 | 7 |
| lineage4.3.3 | 14 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2 | 4 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage3 | 26 |
| lineage1.1.2 | 18 |
| lineage4.4.2 | 1 |
| lineage4.8 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage3.1.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.1.4 | 1 |
| 1 | |
| lineage4 | 2 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 188 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29273640 | MDR-TB | lineage4.1.2.1 | None | SRR5152948 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827447 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13288836 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040198 | MDR-TB | lineage2.2.1 | None | SRR29273829 | XDR-TB | lineage4.1.2.1 | None | ERR13284725 | MDR-TB | lineage4.3.3 | None | SRR11786867 | MDR-TB | lineage2.2.1 | None | SRR8758896 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11488943 | Pre-XDR-TB | lineage4.1.2 | None | ERR11488429 | Pre-XDR-TB | lineage4.1.2 | None | ERR13261066 | MDR-TB | lineage3;lineage4.2.2.2 | None | SRR15316442 | MDR-TB | lineage2.2.1 | None | ERR4798575 | MDR-TB | lineage3 | in | ERR4800211 | MDR-TB | lineage3 | in | ERR4829095 | Pre-XDR-TB | lineage1.1.2 | dj | ERR4797930 | MDR-TB | lineage3 | in | SRR15316196 | RR-TB | lineage4.4.2 | None | ERR2653225 | MDR-TB | lineage4.8 | None | ERR11043829 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801694 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120108 | RR-TB | lineage3 | None | ERR4830841 | Pre-XDR-TB | lineage1.1.2 | et | ERR4828779 | Pre-XDR-TB | lineage2.2.1 | None | ERR502922 | MDR-TB | lineage2.2.1 | None | ERR9119749 | RR-TB | lineage3 | None | ERR4831957 | MDR-TB | lineage2.2.1 | vn | ERR4830783 | Pre-XDR-TB | lineage1.1.2 | et | ERR4830791 | Pre-XDR-TB | lineage1.1.2 | et | ERR11044152 | MDR-TB | lineage2.2.1 | None | SRR6824446 | MDR-TB | lineage2.2.1 | cn | SRR10040364 | MDR-TB | lineage2.2.1 | None | SRR29341531 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR25207170 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737906 | MDR-TB | lineage4.2.2.2 | None | ERR13276208 | MDR-TB | lineage2.2.1 | None | SRR6257087 | MDR-TB | lineage2.2.1 | ru | SRR26331601 | RR-TB | lineage4.3.2.1 | None | SRR19304023 | MDR-TB | lineage3 | None | ERR13284582 | MDR-TB | lineage4.3.3 | None | ERR4827558 | MDR-TB | lineage2.2.1 | None | ERR4828084 | MDR-TB | lineage2.2.1 | None | SRR29273691 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29539301 | Pre-XDR-TB | lineage2.2.1 | None | SRR21276921 | MDR-TB | lineage2.2.1 | None | SRR5065610 | MDR-TB | lineage2.2.1 | vn | SRR15014650 | MDR-TB | lineage3.1.2 | None | ERR11081766 | MDR-TB | lineage4.3.3 | None | SRR3085309 | MDR-TB | lineage1.1.2 | None | SRR3085311 | Pre-XDR-TB | lineage1.1.2 | None | SRR23340035 | Pre-XDR-TB | lineage4.3.3 | None | SRR29017090 | MDR-TB | lineage1.2.2.2 | None | SRR5818576 | MDR-TB | lineage1.1.2 | dj | SRR5818575 | MDR-TB | lineage1.1.2 | dj | SRR3082074 | MDR-TB | lineage1.1.2 | None | SRR6807681 | MDR-TB | lineage2.2.1 | None | ERR9992852 | XDR-TB | lineage2.2.1 | None | ERR2653185 | MDR-TB | lineage4.3.4.1 | None | ERR11488485 | MDR-TB | lineage4.1.2 | None | SRR12882080 | RR-TB | lineage3 | None | SRR12882081 | RR-TB | lineage3 | None | ERR11488520 | MDR-TB | lineage4.1.2 | None | SRR3082094 | Pre-XDR-TB | lineage1.1.2 | None | ERR551878_ERR551877 | MDR-TB | lineage2.2.1 | None | ERR9119816 | RR-TB | lineage3 | None | ERR13267442 | MDR-TB | lineage4.1.2.1 | None | ERR13284962 | MDR-TB | lineage4.3.3 | None | SRR29274249 | RR-TB | lineage4.1.2.1 | None | ERR4553553 | MDR-TB | lineage1.2.2.2 | None | ERR11081443 | MDR-TB | lineage4.3.3 | None | SRR29274093 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13276317 | MDR-TB | lineage3 | None | ERR7975664 | MDR-TB | lineage2.2.1 | None | SRR18714800 | MDR-TB | lineage2.2.1 | None | SRR29274187 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR5817476 | XDR-TB | lineage1.1.2 | None | SRR22424929 | MDR-TB | lineage3 | None | SRR5818697 | MDR-TB | lineage1.1.2 | dj | ERR13284926 | MDR-TB | lineage4.3.3 | None | SRR29273979 | MDR-TB | lineage4.1.2.1 | None | SRR29273630 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4822298 | MDR-TB | lineage3 | None | SRR3085274 | MDR-TB | lineage2.2.1 | None | SRR3086358 | MDR-TB | lineage2.2.1 | None | SRR29093907 | MDR-TB | lineage2.2.1 | None | ERR13284993 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289454 | MDR-TB | lineage2.2.1 | None | SRR29772537 | MDR-TB | lineage3 | None | ERR11043139 | MDR-TB | lineage4.3.3 | None | SRR25514992 | MDR-TB | lineage2.2.1 | None | ERR13284212 | MDR-TB | lineage4.9 | None | ERR4276901 | MDR-TB | lineage3 | None | ERR1035340 | MDR-TB | lineage4.1.2.1 | br | SRR3085312 | Pre-XDR-TB | lineage1.1.2 | None | ERR552479 | MDR-TB | lineage2.2.1 | None | ERR12790851 | MDR-TB | lineage1.1.1.1 | None | SRR28646078 | MDR-TB | lineage4.1.2.1 | None | ERR4831931 | MDR-TB | lineage2.2.1 | vn | ERR4828787 | Pre-XDR-TB | lineage2.2.1 | None | SRR6256988 | MDR-TB | lineage2.2.1 | None | SRR25207069 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR8975640 | Pre-XDR-TB | lineage2.2.1 | None | SRR15014745 | MDR-TB | lineage4.5 | None | ERR137218 | MDR-TB | lineage2.2.1 | ru | ERR108428 | MDR-TB | lineage2.2.1 | ru | ERR2041934 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517040 | Pre-XDR-TB | lineage4.3.3 | gb | ERR2516955 | Pre-XDR-TB | lineage4.3.3 | gb | ERR2516539 | MDR-TB | lineage2.2.1 | nl | ERR2516658 | MDR-TB | lineage4.1.2.1 | pe | SAMEA2534676 | MDR-TB | lineage2.2.1 | kz | ERR11081832 | MDR-TB | lineage4.3.3 | None | ERR11243557 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207068 | XDR-TB | lineage2.2.1.1 | None | SRR23340059 | Pre-XDR-TB | lineage4.3.3 | None | ERR13193801 | MDR-TB | lineage2.2.1 | None | ERR9120107 | RR-TB | lineage3 | None | SRR5818695 | MDR-TB | lineage1.1.2 | dj | SRR7781513 | Pre-XDR-TB | lineage2.2.1 | None | ERR552478 | MDR-TB | lineage2.2.1 | None | SRR20632800 | RR-TB | lineage2.2.1 | None | SRR12882084 | RR-TB | lineage3 | None | SRR24710164 | Pre-XDR-TB | lineage2.2.1 | None | SRR5486902 | MDR-TB | lineage4.1.2.1 | None | ERR9119753 | RR-TB | lineage3 | None | ERR4827440 | MDR-TB | lineage2.2.1 | None | SRR15901693 | Pre-XDR-TB | lineage2.2.1 | None | SRR12882083 | RR-TB | lineage3 | None | ERR13276209 | MDR-TB | lineage2.2.1 | None | SRR20632826 | Pre-XDR-TB | lineage2.2.1 | None | ERR13243530 | MDR-TB | lineage2.2.1 | None | ERR7737851 | MDR-TB | lineage4.2.2.2 | None | SRR19276616 | RR-TB | lineage4.1.4 | None | SRR3085310 | Pre-XDR-TB | lineage1.1.2 | None | ERR13289455 | MDR-TB | lineage2.2.1 | None | SRR23862154 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274107 | MDR-TB | lineage4.1.2.1 | None | SRR10525375 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4553476 | MDR-TB | None | ERR4828774 | Pre-XDR-TB | lineage2.2.1 | None | ERR551877 | MDR-TB | lineage2.2.1 | None | SRR29358129 | MDR-TB | lineage2.2.1 | None | SRR25207067 | XDR-TB | lineage2.2.1.1 | None | ERR2510426 | Pre-XDR-TB | lineage3 | pk | ERR1035322 | MDR-TB | lineage4.3.4.1 | br | SRR6832129 | Pre-XDR-TB | lineage2.2.1 | None | SRR3082075 | MDR-TB | lineage1.1.2 | None | ERR4800503 | MDR-TB | lineage3 | in | ERR13260301 | MDR-TB | lineage4 | None | SRR23252677 | MDR-TB | lineage1.2.1.2.1 | None | SRR28394070 | Pre-XDR-TB | lineage4 | None | ERR4813751 | MDR-TB | lineage4.1.1.3 | br | ERR4831898 | MDR-TB | lineage2.2.1 | None | SAMEA2534261 | MDR-TB | lineage2.2.1 | uz | SRR5266548 | MDR-TB | lineage2.2.1 | ru | SRR5266547 | MDR-TB | lineage2.2.1 | ru | ERR11044151 | MDR-TB | lineage2.2.1 | None | SRR28706507 | MDR-TB | lineage2.2.1 | None | ERR144550 | RR-TB | lineage2.2.1 | ru | SRR25207178 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10040456 | Pre-XDR-TB | lineage2.2.1 | None | SRR12882608 | RR-TB | lineage3 | None | SRR23938639 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119786 | RR-TB | lineage3 | None | SRR25206903 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4811999 | MDR-TB | lineage4.1.2.1 | pe | ERR9119923 | RR-TB | lineage3 | None | ERR2516177 | MDR-TB | lineage2.2.1 | be | ERR4830808 | Pre-XDR-TB | lineage1.1.2 | et | SRR12882079 | RR-TB | lineage3 | None | ERR4831886 | MDR-TB | lineage2.2.1 | vn | ERR4827954 | MDR-TB | lineage2.2.1 | None | SRR6832545 | MDR-TB | lineage4.1.2.1 | None | SRR26937016 | MDR-TB | lineage2.2.1 | None | SRR29273673 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR23310957 | MDR-TB | lineage2.2.1 | None | SRR10380110 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380042 | MDR-TB | lineage2.2.1 | None | SRR29274029 | MDR-TB | lineage4.1.2.1 | None | SRR24709991 | Pre-XDR-TB | lineage4.3.3 | None | SRR29017087 | MDR-TB | lineage3 | None | ERR7975686 | MDR-TB | lineage4.3.3 | None | SRR15901694 | Pre-XDR-TB | lineage2.2.1 | None | ERR551878 | MDR-TB | lineage2.2.1 | None | SRR5817477 | Pre-XDR-TB | lineage1.1.2 | None | SRR22048331 | MDR-TB | lineage3 | None | SRR25207179 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR3743373 | HR-TB | lineage2.2.1 | None |
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