lineage | Count |
---|---|
lineage4.1.2.1 | 20 |
lineage4.1.1 | 3 |
lineage4.6.2.2 | 13 |
lineage4.3.4.2.1 | 2 |
lineage2.2.2 | 3 |
lineage2.2.1 | 8 |
lineage4.1 | 1 |
lineage4.1.1.3 | 6 |
lineage3.1.2 | 1 |
lineage3 | 3 |
lineage4.8.1 | 1 |
lineage1.1.3.1 | 1 |
lineage1.1.2 | 2 |
lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 65 |
ID | Drug resistance | Lineage | Country iso2 | SRR7592333 | MDR-TB | lineage4.1.2.1 | None | SRR19276640 | Pre-XDR-TB | lineage4.1.1 | None | ERR2516758 | MDR-TB | lineage4.6.2.2 | gb | SRR3082112 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2433003 | MDR-TB | lineage4.3.4.2.1 | br | ERR2517094 | MDR-TB | lineage4.6.2.2 | gb | ERR5979539 | MDR-TB | lineage4.1.2.1 | None | SRR7592348 | MDR-TB | lineage4.1.2.1 | None | ERR13193753 | MDR-TB | lineage2.2.2 | None | ERR369715 | MDR-TB | lineage4.6.2.2 | None | SRR20632788 | MDR-TB | lineage2.2.1 | None | SRR29539700 | MDR-TB | lineage4.1 | None | ERR9807010 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29016866 | MDR-TB | lineage2.2.1 | None | SRR10525367 | MDR-TB | lineage4.1.2.1 | None | SRR10525369 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR369721 | MDR-TB | lineage4.6.2.2 | None | ERR11081082 | MDR-TB | lineage4.1.2.1 | None | ERR751576 | MDR-TB | lineage4.1.2.1 | pe | ERR7911585 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR29772531 | MDR-TB | lineage3.1.2 | None | ERR2516834 | MDR-TB | lineage4.6.2.2 | gb | ERR4830605 | MDR-TB | lineage2.2.1 | tm | ERR13267487 | MDR-TB | lineage3 | None | SRR7782648 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2517021 | MDR-TB | lineage4.6.2.2 | gb | ERR369733 | MDR-TB | lineage4.6.2.2 | None | ERR751451 | Pre-XDR-TB | lineage4.1.1 | pe | ERR502404 | MDR-TB | lineage4.6.2.2 | None | ERR9806925 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29273902 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971125 | MDR-TB | lineage4.8.1 | None | SRR28119825 | MDR-TB | lineage2.2.1 | None | ERR2510648 | MDR-TB | lineage3 | pk | ERR13285096 | MDR-TB | lineage4.1.2.1 | None | SRR15465775 | MDR-TB | lineage1.1.3.1 | None | SRR20969426 | Pre-XDR-TB | lineage2.2.2 | None | ERR8025541 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2517085 | MDR-TB | lineage4.6.2.2 | gb | SRR26937021 | MDR-TB | lineage4.1.2.1 | None | ERR9634299 | MDR-TB | lineage2.2.1 | None | SRR29772627 | MDR-TB | lineage1.1.2 | None | SRR29273910 | MDR-TB | lineage4.1.2.1 | None | ERR2517028 | MDR-TB | lineage4.6.2.2 | gb | SRR28394056 | MDR-TB | lineage4.1.1 | None | SRR20969758 | Pre-XDR-TB | lineage2.2.1 | None | ERR9634300 | MDR-TB | lineage2.2.1 | None | SRR29273711 | MDR-TB | lineage4.1.2.1 | None | ERR502356 | MDR-TB | lineage4.6.2.2 | None | SRR22424941 | Pre-XDR-TB | lineage1.1.2 | None | ERR369756 | MDR-TB | lineage4.6.2.2 | None | ERR775386 | MDR-TB | lineage4.1.2.1 | pe | SRR6964482 | RR-TB | lineage3 | None | ERR7911677 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR7592338 | MDR-TB | lineage4.1.2.1 | None | SRR5486890 | MDR-TB | lineage4.1.2.1 | None | SRR20969645 | Pre-XDR-TB | lineage2.2.2 | None | ERR2433007 | MDR-TB | lineage4.3.4.2.1 | None | ERR502272 | MDR-TB | lineage4.6.2.2 | None | ERR2510867 | Pre-XDR-TB | lineage4.1.2.1 | it | SRR3085351 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9806888 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025551 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510731 | MDR-TB | lineage4.1.2.1 | it | SRR6079935 | MDR-TB | lineage2.2.1.1 | au |
---|