lineage | Count |
---|---|
lineage3 | 3 |
lineage2.2.1.1 | 2 |
lineage4.3.4.2.1 | 3 |
lineage2.2.1 | 5 |
lineage2.2.2 | 1 |
lineage2.2.1.2 | 2 |
lineage4 | 1 |
lineage4.1.1 | 1 |
lineage4.9 | 1 |
lineage3.1 | 5 |
lineage4.1;lineage4.8 | 1 |
lineage6.3.3 | 1 |
lineage4.8 | 2 |
lineage4.3.2 | 1 |
lineage4.1.2.1 | 2 |
lineage1.2.2.2;lineage2.2.1;lineage3;lineage4.9 | 1 |
lineage1.1.3.1 | 2 |
lineage1.2.1.2.1 | 1 |
lineage4.3.4.1 | 1 |
lineage4.1 | 1 |
lineage1.1.2 | 1 |
spoligotype | Count |
---|---|
None | 38 |
ID | Drug resistance | Lineage | Country iso2 | SRR6339644 | MDR-TB | lineage3 | au | SRR15661580 | MDR-TB | lineage2.2.1.1 | None | ERR4011991 | RR-TB | lineage4.3.4.2.1 | None | SRR10040326 | MDR-TB | lineage2.2.1 | None | ERR13191366 | MDR-TB | lineage2.2.2 | None | ERR7737768 | MDR-TB | lineage2.2.1 | None | SRR25206946 | MDR-TB | lineage2.2.1.2 | None | ERR3287505 | MDR-TB | lineage4 | None | ERR4812994 | Pre-XDR-TB | lineage4.1.1 | None | ERR9993220 | Pre-XDR-TB | lineage4.9 | None | SRR29055949 | MDR-TB | lineage4.3.4.2.1 | None | SRR29016823 | Pre-XDR-TB | lineage3.1 | None | ERR133938 | Pre-XDR-TB | lineage4.1;lineage4.8 | ru | SRR29096690 | RR-TB | lineage4.3.4.2.1 | None | ERR4811301 | MDR-TB | lineage2.2.1.2 | cn | ERR10679998 | MDR-TB | lineage6.3.3 | None | ERR4553988 | MDR-TB | lineage3.1 | None | SRR28045590 | Pre-XDR-TB | lineage2.2.1 | None | SRR7653082 | Pre-XDR-TB | lineage4.8 | None | ERR3287554 | MDR-TB | lineage4.3.2 | None | ERR2517001 | MDR-TB | lineage4.1.2.1 | gb | ERR4553975 | XDR-TB | lineage3.1 | None | SRR25827614 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1;lineage3;lineage4.9 | None | ERR4553645 | MDR-TB | lineage1.1.3.1 | None | SRR28858466 | Pre-XDR-TB | lineage3 | None | SRR29080993 | MDR-TB | lineage1.2.1.2.1 | None | SRR29017015 | MDR-TB | lineage1.1.3.1 | None | SRR22536478 | MDR-TB | lineage4.3.4.1 | None | ERR10680196 | MDR-TB | lineage4.8 | None | ERR4553663 | MDR-TB | lineage3.1 | None | SRR4423140 | MDR-TB | lineage3.1 | None | SRR22424793 | Pre-XDR-TB | lineage2.2.1 | None | ERR133937 | Pre-XDR-TB | lineage4.1 | ru | SRR25206911 | MDR-TB | lineage2.2.1 | None | SRR15600352 | MDR-TB | lineage2.2.1.1 | None | SRR9738509 | RR-TB | lineage4.1.2.1 | None | SRR15014756 | MDR-TB | lineage1.1.2 | None | ERR2510284 | Pre-XDR-TB | lineage3 | pk |
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