lineage | Count |
---|---|
lineage4.1.1.3.1 | 3 |
lineage2.2.1 | 7 |
lineage4.8 | 4 |
lineage5.2 | 3 |
lineage4.3.4.2 | 9 |
lineage4.6 | 2 |
lineage4.3.4.1 | 5 |
lineage4.6.2.2 | 5 |
lineage1.1.3.1 | 1 |
lineage4 | 1 |
lineage3 | 2 |
lineage4.1.2.1 | 3 |
lineage2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.1 | 2 |
lineage4.9 | 1 |
lineage1.1.2 | 1 |
lineage1.2.2.1 | 2 |
lineage6.2.2 | 1 |
spoligotype | Count |
---|---|
None | 54 |
ID | Drug resistance | Lineage | Country iso2 | ERR4821850 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR10869037 | MDR-TB | lineage2.2.1 | None | SRR1174317 | MDR-TB | lineage4.8 | None | SRR29231703 | MDR-TB | lineage5.2 | None | ERR6865475 | MDR-TB | lineage4.3.4.2 | None | ERR9119479 | MDR-TB | lineage4.6 | None | SRR10808944 | MDR-TB | lineage4.3.4.1 | None | ERR11488436 | RR-TB | lineage4.3.4.1 | None | ERR038742 | MDR-TB | lineage4.8 | ug | SRR10869240 | MDR-TB | lineage2.2.1 | None | ERR2706914 | MDR-TB | lineage5.2 | cd | ERR3287835 | MDR-TB | lineage4.3.4.2 | pe | ERR8774514 | MDR-TB | lineage4.6.2.2 | None | SRR18693893 | MDR-TB | lineage1.1.3.1 | None | ERR4423781 | MDR-TB | lineage4.6.2.2 | None | ERR8774512 | MDR-TB | lineage4.6.2.2 | None | ERR4423782 | MDR-TB | lineage4.6.2.2 | None | ERR3287560 | MDR-TB | lineage4.3.4.1 | None | ERR4025027 | MDR-TB | lineage4.3.4.2 | None | SRR28393361 | MDR-TB | lineage4 | None | ERR2510465 | MDR-TB | lineage3 | pk | SRR29093549 | MDR-TB | lineage2.2.1 | None | SRR16088283 | MDR-TB | lineage4.1.2.1 | None | SRR29093737 | MDR-TB | lineage2.2.1 | None | SRR29772693 | Pre-XDR-TB | lineage3 | None | SRR10040230 | MDR-TB | lineage2.1 | None | ERR4813386 | MDR-TB | lineage4.3.4.2 | pe | ERR4024921 | MDR-TB | lineage4.3.4.2 | None | ERR779880 | MDR-TB | lineage4.3.4.2 | pe | SRR1173412 | MDR-TB | lineage4.8 | None | SRR15661602 | MDR-TB | lineage2.2.1.1 | None | ERR4829981 | MDR-TB | lineage4.6.2.2 | None | SRR29539000 | MDR-TB | lineage4.1 | None | ERR4810971 | Pre-XDR-TB | lineage2.2.1 | cn | SRR21277290 | Pre-XDR-TB | lineage2.2.1 | None | SRR26112476 | MDR-TB | lineage4.9 | None | ERR6865416 | MDR-TB | lineage4.3.4.2 | None | ERR2184566 | MDR-TB | lineage4.3.4.1 | pe | SRR22461676 | MDR-TB | lineage4.3.4.1 | None | SRR29772625 | MDR-TB | lineage1.1.2 | None | SRR10397107 | RR-TB | lineage4.3.4.2 | None | ERR2706930 | MDR-TB | lineage5.2 | cd | ERR11466074 | RR-TB | lineage1.2.2.1 | None | ERR4818346 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | SRR10040248 | MDR-TB | lineage2.2.1 | None | SRR16088294 | MDR-TB | lineage4.1.2.1 | None | ERR10680008 | MDR-TB | lineage6.2.2 | None | ERR3148174 | MDR-TB | lineage4.1.2.1 | mx | ERR4872073 | MDR-TB | lineage4.6 | None | ERR3287619 | MDR-TB | lineage4.3.4.2 | pe | ERR10762251 | Pre-XDR-TB | lineage4.8 | None | ERR4819771 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4423736 | RR-TB | lineage1.2.2.1 | None | ERR11068542 | MDR-TB | lineage4.1 | None |
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