lineage | Count |
---|---|
lineage4.3.4.2 | 9 |
lineage4.6.2.2 | 5 |
lineage4.6 | 2 |
lineage2.2.1 | 4 |
lineage4.3.4.1 | 3 |
lineage2.2.1.1 | 1 |
lineage4.8 | 4 |
lineage2.2.2 | 1 |
lineage1.1.3.1 | 1 |
lineage4.1.2.1 | 2 |
lineage4.1.1.3.1 | 3 |
lineage4.1 | 1 |
lineage4 | 1 |
lineage3 | 1 |
lineage5.2 | 2 |
lineage1.2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 41 |
ID | Drug resistance | Lineage | Country iso2 | ERR6865416 | MDR-TB | lineage4.3.4.2 | None | ERR6865475 | MDR-TB | lineage4.3.4.2 | None | ERR779880 | MDR-TB | lineage4.3.4.2 | pe | SRR10397107 | RR-TB | lineage4.3.4.2 | None | ERR8774512 | MDR-TB | lineage4.6.2.2 | None | ERR8774514 | MDR-TB | lineage4.6.2.2 | None | ERR9119479 | MDR-TB | lineage4.6 | None | SRR10869037 | MDR-TB | lineage2.2.1 | None | SRR10808944 | MDR-TB | lineage4.3.4.1 | None | SRR10869240 | MDR-TB | lineage2.2.1 | None | SRR15661602 | MDR-TB | lineage2.2.1.1 | None | SRR1173412 | MDR-TB | lineage4.8 | None | SRR1174317 | MDR-TB | lineage4.8 | None | SRR13423555 | RR-TB | lineage2.2.2 | None | SRR18693893 | MDR-TB | lineage1.1.3.1 | None | SRR16088294 | MDR-TB | lineage4.1.2.1 | None | ERR4818346 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR11068542 | MDR-TB | lineage4.1 | None | SRR21277290 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815776 | Sensitive | lineage4 | None | ERR3148174 | MDR-TB | lineage4.1.2.1 | mx | ERR4813386 | MDR-TB | lineage4.3.4.2 | pe | ERR2184566 | MDR-TB | lineage4.3.4.1 | pe | ERR4821850 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR2510465 | MDR-TB | lineage3 | pk | ERR4819771 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR3287560 | MDR-TB | lineage4.3.4.1 | None | ERR2706914 | MDR-TB | lineage5.2 | cd | ERR038742 | MDR-TB | lineage4.8 | ug | ERR2706930 | MDR-TB | lineage5.2 | cd | ERR4829981 | MDR-TB | lineage4.6.2.2 | None | ERR4872073 | MDR-TB | lineage4.6 | None | ERR10762251 | Pre-XDR-TB | lineage4.8 | None | ERR3287619 | MDR-TB | lineage4.3.4.2 | pe | ERR4024921 | MDR-TB | lineage4.3.4.2 | None | ERR3287835 | MDR-TB | lineage4.3.4.2 | pe | ERR4025027 | MDR-TB | lineage4.3.4.2 | None | ERR4423736 | RR-TB | lineage1.2.2.1 | None | ERR4423781 | MDR-TB | lineage4.6.2.2 | None | ERR4423782 | MDR-TB | lineage4.6.2.2 | None | ERR4810971 | Pre-XDR-TB | lineage2.2.1 | cn |
---|