lineage | Count |
---|---|
lineage2.2.1 | 35 |
lineage2.2 | 4 |
lineage4.3.3 | 13 |
lineage3 | 1 |
lineage4 | 1 |
lineage4.3 | 1 |
lineage2.2.2 | 1 |
lineage4.8 | 1 |
lineage4.3.2 | 2 |
spoligotype | Count |
---|---|
None | 59 |
ID | Drug resistance | Lineage | Country iso2 | SRR6930899 | Pre-XDR-TB | lineage2.2.1 | None | DRR130162 | MDR-TB | lineage2.2.1 | None | ERR017799 | Pre-XDR-TB | lineage2.2.1 | None | ERR019873 | Pre-XDR-TB | lineage2.2 | None | ERR10869423 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762443 | MDR-TB | lineage2.2.1 | None | ERR026644 | Pre-XDR-TB | lineage2.2 | None | ERR067627 | MDR-TB | lineage2.2.1 | ru | ERR10762407 | MDR-TB | lineage2.2.1 | None | ERR3287463 | MDR-TB | lineage4.3.3 | pe | ERR133886 | MDR-TB | lineage2.2.1 | ru | ERR144597 | MDR-TB | lineage2.2.1 | ru | ERR3794513 | MDR-TB | lineage2.2.1 | None | ERR3335723 | Pre-XDR-TB | lineage3 | pk | ERR4796514 | MDR-TB | lineage2.2.1 | in | ERR403327 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553539 | MDR-TB | lineage2.2.1 | None | ERR4812621 | MDR-TB | lineage4.3.3 | pe | ERR4797525 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799632 | Pre-XDR-TB | lineage2.2.1 | in | ERR751553 | MDR-TB | lineage4.3.3 | pe | SRR10380074 | MDR-TB | lineage2.2.1 | None | ERR7737626 | MDR-TB | lineage2.2.1 | None | SRR10379967 | MDR-TB | lineage2.2.1 | None | ERR9993060 | Pre-XDR-TB | lineage2.2.1 | None | SRR10306020 | MDR-TB | lineage2.2.1 | None | SRR1172835 | MDR-TB | lineage4.3.3 | None | SRR1173442 | MDR-TB | lineage4.3.3 | None | SRR1196518 | MDR-TB | lineage4.3.3 | None | SRR1175040 | MDR-TB | lineage4 | None | SRR1173563 | MDR-TB | lineage4.3 | None | SRR1184328 | MDR-TB | lineage4.3.3 | None | SRR1184374 | MDR-TB | lineage4.3.3 | None | SRR1196671 | MDR-TB | lineage4.3.3 | None | SRR15316019 | MDR-TB | lineage2.2.1 | None | SAMN02586009 | MDR-TB | lineage4.3.3 | za | SRR2100740 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112862 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723567 | MDR-TB | lineage2.2.1 | cn | SRR18714928 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715308 | Pre-XDR-TB | lineage2.2.1 | None | ERR11069054 | MDR-TB | lineage2.2.2 | None | ERR11080965 | MDR-TB | lineage4.8 | None | ERR10112851 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02586045 | MDR-TB | lineage4.3.3 | za | SRR5153622 | Pre-XDR-TB | lineage2.2.1 | None | ERR229946 | MDR-TB | lineage2.2.1 | ru | ERR230008 | MDR-TB | lineage2.2.1 | ru | SAMEA2535049 | MDR-TB | lineage2.2.1 | uz | ERR2516984 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2864224 | MDR-TB | lineage4.3.2 | pt | ERR2707056 | MDR-TB | lineage4.3.3 | cd | ERR4822360 | MDR-TB | lineage2.2.1 | None | SRR23310959 | MDR-TB | lineage2.2 | None | SRR23311050 | MDR-TB | lineage2.2 | None | ERR266521 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707133 | MDR-TB | lineage4.3.3 | cd | SRR6356996 | Pre-XDR-TB | lineage2.2.1 | None | SRR6511640 | MDR-TB | lineage4.3.2 | None |
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