lineage | Count |
---|---|
lineage4.1.1.3 | 11 |
lineage2.2.1 | 26 |
lineage2.2.2;lineage4.1.1.3 | 1 |
lineage2.2.1;lineage4.1.2.1 | 3 |
lineage4.1.2.1 | 16 |
lineage4.5 | 1 |
lineage4.4.2 | 1 |
lineage1.1.2 | 1 |
spoligotype | Count |
---|---|
None | 60 |
ID | Drug resistance | Lineage | Country iso2 | ERR1873550 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR21887746 | Pre-XDR-TB | lineage2.2.1 | None | ERR6361954 | MDR-TB | lineage2.2.1 | None | ERR6361955 | MDR-TB | lineage2.2.1 | None | ERR11081168 | MDR-TB | lineage2.2.1 | None | ERR13289008 | Pre-XDR-TB | lineage2.2.2;lineage4.1.1.3 | None | ERR2515475 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR11043890 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR11081767 | MDR-TB | lineage2.2.1 | None | SRR29273850 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR21887762 | Pre-XDR-TB | lineage2.2.1 | None | ERR13288961 | XDR-TB | lineage4.1.1.3 | None | ERR13267045 | XDR-TB | lineage4.1.1.3 | None | ERR10748424 | MDR-TB | lineage4.1.1.3 | None | ERR9993009 | XDR-TB | lineage4.1.1.3 | None | SRR23691397 | MDR-TB | lineage2.2.1 | None | ERR9120118 | MDR-TB | lineage2.2.1 | None | ERR11043144 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29273719 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13261120 | XDR-TB | lineage4.1.1.3 | None | SRR29274120 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13266647 | XDR-TB | lineage4.1.1.3 | None | ERR4831573 | MDR-TB | lineage2.2.1 | None | SRR29096852 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29539424 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887736 | MDR-TB | lineage2.2.1 | None | ERR9120078 | MDR-TB | lineage2.2.1 | None | ERR9120117 | MDR-TB | lineage2.2.1 | None | SRR6824531 | MDR-TB | lineage4.5 | cn | SRR21887648 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274009 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29273612 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9120077 | MDR-TB | lineage2.2.1 | None | SRR29273839 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13286205 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29385263 | MDR-TB | lineage4.4.2 | None | ERR3794517 | MDR-TB | lineage2.2.1 | None | SRR10869284 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11773786 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887719 | MDR-TB | lineage2.2.1 | None | ERR2677455 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | de | ERR2516787 | MDR-TB | lineage2.2.1 | gb | SRR29273861 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR5486872 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29274109 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13276261 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR10525363 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR28239722 | MDR-TB | lineage2.2.1 | None | SRR29273686 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29274098 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9738485 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR6831802 | MDR-TB | lineage2.2.1 | None | SRR29274768 | MDR-TB | lineage2.2.1 | None | ERR2677396 | Pre-XDR-TB | lineage4.1.2.1 | de | SRR21887710 | Pre-XDR-TB | lineage2.2.1 | None | SRR29273608 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13260052 | MDR-TB | lineage1.1.2 | None | ERR13284869 | MDR-TB | lineage2.2.1 | None | SRR21887680 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887752 | Pre-XDR-TB | lineage2.2.1 | None |
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