lineage | Count |
---|---|
lineage2.2.1 | 30 |
lineage4.1 | 2 |
lineage2.2.1.1 | 4 |
lineage2.2 | 2 |
1 | |
lineage4.1.2.1 | 29 |
lineage4.1.2 | 1 |
lineage3 | 2 |
spoligotype | Count |
---|---|
None | 71 |
ID | Drug resistance | Lineage | Country iso2 | SRR16088361 | MDR-TB | lineage2.2.1 | None | SRR15316365 | MDR-TB | lineage2.2.1 | None | ERR11082103 | MDR-TB | lineage4.1 | None | SRR21747064 | MDR-TB | lineage2.2.1 | None | SRR16370236 | MDR-TB | lineage2.2.1 | None | ERR11082611 | MDR-TB | lineage2.2.1 | None | ERR9806845 | RR-TB | lineage2.2.1.1 | None | ERR10610087 | RR-TB | lineage2.2.1.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4812869 | Pre-XDR-TB | None | ERR4813104 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4812952 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813096 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813095 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813117 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR4035814 | Sensitive | lineage4.1.2 | za | ERR4813133 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813177 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813200 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813205 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2184286 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2184393 | MDR-TB | lineage4.1.2.1 | pe | ERR4813124 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813126 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813132 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813157 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813176 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813202 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1723568 | MDR-TB | lineage2.2.1 | cn | ERR3148062 | MDR-TB | lineage4.1 | None | ERR2516738 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4827893 | MDR-TB | lineage2.2.1 | None | ERR4827785 | MDR-TB | lineage2.2.1 | None | ERR2516431 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4827437 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831803 | MDR-TB | lineage2.2.1 | None | ERR4831437 | Pre-XDR-TB | lineage3 | None | ERR4831414 | MDR-TB | lineage2.2.1 | de | SRR671758 | MDR-TB | lineage2.2.1.1 | cn | ERR4831429 | Pre-XDR-TB | lineage3 | None | SRR6832185 | MDR-TB | lineage2.2.1 | None | SRR6832782 | MDR-TB | lineage2.2.1 | None | SRR6824470 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3287820 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR6824559 | MDR-TB | lineage2.2.1 | cn | ERR3287623 | MDR-TB | lineage2.2.1 | pe | SRR6824638 | MDR-TB | lineage2.2.1 | cn | SRR7652977 | MDR-TB | lineage2.2.1 | None | SRR7653084 | Pre-XDR-TB | lineage2.2.1 | None | DRR130091 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287375 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR3287419 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR10767003 | MDR-TB | lineage2.2.1.1 | None | ERR3287862 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR3287871 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR3794514 | MDR-TB | lineage2.2.1 | None | ERR4800690 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911165 | MDR-TB | lineage2.2.1 | vn | ERR8774378 | MDR-TB | lineage2.2.1 | None | SRR10397149 | MDR-TB | lineage2.2.1 | None | SRR10397201 | MDR-TB | lineage2.2.1 | None | SRR10808626 | MDR-TB | lineage4.1.2.1 | None | SRR10808353 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR10854752 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142373 | MDR-TB | lineage2.2.1 | None | SRR13870385 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13355781 | MDR-TB | lineage2.2.1 | None | SRR13870372 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13870394 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13870413 | Pre-XDR-TB | lineage4.1.2.1 | None |
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