Rv0668 - p.Val1039Ala
Drug resistance types
1 Sensitive
3 RR-TB
0 HR-TB
208 MDR-TB
52 Pre-XDR-TB
4 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 149 |
| lineage4.8 | 30 |
| lineage6.3.3 | 1 |
| lineage4.3.3 | 5 |
| lineage4.5 | 1 |
| lineage2.2.1 | 47 |
| lineage4.6.2.2 | 4 |
| lineage2.2.1.1 | 3 |
| 2 | |
| lineage3 | 2 |
| lineage2.2.2 | 4 |
| lineage4.3.4.1 | 5 |
| lineage4.1.2.1.1 | 1 |
| lineage4 | 6 |
| lineage4.1.1.3 | 1 |
| lineage4.8;lineage4.1.1.3 | 3 |
| lineage4.2.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.1.2 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 269 |
Geographic prevalence
Country level data for this variant is available for 52 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6856035 | MDR-TB | lineage4.4.1.1 | None | SRR9971251 | MDR-TB | lineage4.4.1.1 | None | SRR9971286 | MDR-TB | lineage4.4.1.1 | None | SRR9971278 | Pre-XDR-TB | lineage4.8 | None | SRR924221 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR832977 | MDR-TB | lineage4.4.1.1 | None | SRR9971316 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR833014 | MDR-TB | lineage4.4.1.1 | None | SRR832997 | MDR-TB | lineage4.4.1.1 | None | SRR833018 | MDR-TB | lineage4.4.1.1 | None | SRR833017 | MDR-TB | lineage4.4.1.1 | None | SRR9971366 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9971105 | XDR-TB | lineage4.4.1.1 | None | SAMN02350492 | Pre-XDR-TB | lineage4.4.1.1 | za | SAMN02586042 | MDR-TB | lineage4.8 | za | SRR9971027 | MDR-TB | lineage4.4.1.1 | None | SRR9971052 | MDR-TB | lineage4.4.1.1 | None | SRR9971365 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR833117 | MDR-TB | lineage4.4.1.1 | None | SRR847797 | Pre-XDR-TB | lineage4.4.1.1 | za | SRR9970996 | XDR-TB | lineage4.4.1.1 | None | SRR9970998 | MDR-TB | lineage4.8 | None | SRR9971152 | MDR-TB | lineage4.8 | None | SRR9971130 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9971178 | MDR-TB | lineage4.8 | None | SRR9971164 | MDR-TB | lineage4.4.1.1 | None | SRR9971177 | MDR-TB | lineage4.4.1.1 | None | SRR9971175 | MDR-TB | lineage4.8 | None | SRR9971171 | MDR-TB | lineage4.4.1.1 | None | SRR9971188 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9971191 | MDR-TB | lineage4.4.1.1 | None | SRR9971199 | MDR-TB | lineage4.4.1.1 | None | ERR10680124 | MDR-TB | lineage6.3.3 | None | ERR10680140 | RR-TB | lineage4.3.3 | None | ERR10748251 | MDR-TB | lineage4.4.1.1 | None | ERR10748180 | MDR-TB | lineage4.4.1.1 | None | ERR10748185 | MDR-TB | lineage4.4.1.1 | None | ERR10748224 | MDR-TB | lineage4.4.1.1 | None | ERR10748268 | MDR-TB | lineage4.4.1.1 | None | ERR10748259 | MDR-TB | lineage4.4.1.1 | None | ERR10748274 | MDR-TB | lineage4.4.1.1 | None | ERR3273089 | MDR-TB | lineage4.5 | None | ERR10748445 | MDR-TB | lineage4.4.1.1 | None | ERR11043777 | MDR-TB | lineage2.2.1 | None | ERR3794459 | MDR-TB | lineage2.2.1 | None | ERR3639741 | MDR-TB | lineage2.2.1 | None | ERR3639821 | Pre-XDR-TB | lineage4.3.3 | None | ERR3794453 | MDR-TB | lineage2.2.1 | None | ERR3794369 | MDR-TB | lineage2.2.1 | None | ERR3794480 | MDR-TB | lineage2.2.1 | None | ERR3794464 | MDR-TB | lineage2.2.1 | None | ERR3794516 | MDR-TB | lineage2.2.1 | None | ERR4423766 | MDR-TB | lineage4.6.2.2 | None | ERR4423765 | MDR-TB | lineage4.6.2.2 | None | ERR3794515 | MDR-TB | lineage2.2.1 | None | ERR4796775 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4553849 | MDR-TB | None | ERR4553561 | MDR-TB | lineage3 | None | ERR4798005 | Pre-XDR-TB | lineage4.8 | in | ERR4799796 | XDR-TB | lineage4.8 | in | ERR4799169 | Pre-XDR-TB | lineage4.8 | in | ERR6362920 | MDR-TB | lineage4.8 | None | ERR4809298 | MDR-TB | lineage4.4.1.1 | za | ERR5866406 | MDR-TB | lineage2.2.1 | None | ERR5866407 | MDR-TB | lineage2.2.1 | None | ERR5866408 | MDR-TB | lineage2.2.1 | None | ERR4809173 | MDR-TB | lineage4.4.1.1 | za | ERR4810940 | MDR-TB | lineage2.2.2 | cn | ERR5917967 | Pre-XDR-TB | lineage4.4.1.1 | za | ERR11049931 | MDR-TB | lineage2.2.1 | None | ERR6866442 | MDR-TB | lineage4.3.4.1 | None | ERR7737666 | MDR-TB | lineage4.4.1.1 | None | ERR7737649 | MDR-TB | lineage4.4.1.1 | None | ERR760858 | MDR-TB | lineage4.1.2.1.1 | ar | ERR7737738 | MDR-TB | lineage4.4.1.1 | None | ERR7737688 | MDR-TB | lineage4.4.1.1 | None | ERR7737788 | MDR-TB | lineage4.4.1.1 | None | ERR7737747 | MDR-TB | lineage4.4.1.1 | None | ERR7737843 | MDR-TB | lineage4.4.1.1 | None | ERR7737802 | MDR-TB | lineage4.4.1.1 | None | ERR845942 | RR-TB | lineage4 | None | ERR7737920 | MDR-TB | lineage4.4.1.1 | None | ERR7911437 | MDR-TB | lineage4.4.1.1 | za | ERR7737904 | MDR-TB | lineage4.4.1.1 | None | ERR7911203 | MDR-TB | lineage4.4.1.1 | za | ERR7911205 | MDR-TB | lineage4.8 | za | ERR7911438 | MDR-TB | lineage4.4.1.1 | za | ERR7911446 | MDR-TB | lineage4.4.1.1 | za | ERR845935 | MDR-TB | lineage4.3.4.1 | pe | ERR9029377 | MDR-TB | lineage4.4.1.1 | None | ERR8975509 | XDR-TB | lineage4.4.1.1 | None | ERR8975512 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR8975948 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR8774487 | MDR-TB | lineage4.6.2.2 | None | ERR8774488 | MDR-TB | lineage4.6.2.2 | None | ERR8975810 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR985424 | RR-TB | lineage2.2.1.1 | None | ERR9119823 | MDR-TB | lineage4.8 | None | ERR9992837 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9992632 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9992789 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9992627 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9992640 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9992643 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9992801 | Pre-XDR-TB | lineage2.2.2 | None | SRR10303319 | MDR-TB | lineage2.2.1 | None | ERR9993107 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1019153 | MDR-TB | lineage4.4.1.1 | None | SRR10303292 | MDR-TB | lineage2.2.1 | None | SRR10303313 | MDR-TB | lineage2.2.1 | None | ERR9992983 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9992997 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993071 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9993129 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9993151 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9993193 | Pre-XDR-TB | lineage2.2.2 | None | SRR1019160 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10303329 | MDR-TB | lineage2.2.1 | None | SRR10303333 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315616 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR10315463 | MDR-TB | lineage4.4.1.1 | None | SRR10315603 | MDR-TB | lineage4.8 | None | SRR10315510 | MDR-TB | lineage4.4.1.1 | None | SRR10315532 | MDR-TB | lineage4.4.1.1 | None | SRR10430348 | MDR-TB | lineage2.2.1 | None | SRR10430317 | MDR-TB | lineage2.2.1 | None | SRR10430342 | MDR-TB | lineage2.2.1 | None | SRR10430385 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR10430381 | MDR-TB | lineage2.2.1 | None | SRR11349195 | MDR-TB | lineage4.4.1.1 | None | SRR1165244 | MDR-TB | lineage4.4.1.1 | None | SRR1140924 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1140899 | MDR-TB | lineage4.4.1.1 | None | SRR1165266 | MDR-TB | lineage4.4.1.1 | None | SRR1165254 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1165328 | MDR-TB | lineage4.1.1.3 | None | SRR1165645 | MDR-TB | lineage4.4.1.1 | None | SRR1165620 | MDR-TB | lineage4.4.1.1 | None | SRR1165653 | MDR-TB | lineage4.4.1.1 | None | SRR1165668 | MDR-TB | lineage4.4.1.1 | None | SRR1167279 | MDR-TB | lineage4.8;lineage4.1.1.3 | None | SRR1165715 | MDR-TB | lineage4 | None | SRR1165719 | MDR-TB | lineage4 | None | SRR1165701 | MDR-TB | lineage4 | None | SRR1167316 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1167304 | MDR-TB | lineage4.4.1.1 | None | SRR1167324 | MDR-TB | lineage4.4.1.1 | None | SRR1167342 | MDR-TB | lineage4.4.1.1 | None | SRR1167345 | MDR-TB | None | SRR1169149 | MDR-TB | lineage4.8 | None | SRR1167386 | MDR-TB | lineage4 | None | SRR1169148 | MDR-TB | lineage4.4.1.1 | None | SRR1167344 | MDR-TB | lineage4.4.1.1 | None | SRR1167376 | MDR-TB | lineage4.4.1.1 | None | SRR1169150 | MDR-TB | lineage4.4.1.1 | None | SRR1169220 | MDR-TB | lineage4.4.1.1 | None | SRR1169201 | MDR-TB | lineage4.8 | None | SRR1169217 | MDR-TB | lineage4.4.1.1 | None | SRR1173339 | MDR-TB | lineage4.4.1.1 | None | SRR1169310 | MDR-TB | lineage4.4.1.1 | None | SRR1172090 | MDR-TB | lineage4.4.1.1 | None | SRR1172261 | MDR-TB | lineage4.8 | None | SRR1172777 | MDR-TB | lineage4.4.1.1 | None | SRR1173321 | MDR-TB | lineage4.4.1.1 | None | SRR1169293 | MDR-TB | lineage4.8 | None | SRR1169314 | MDR-TB | lineage4.4.1.1 | None | SRR1172353 | MDR-TB | lineage4.4.1.1 | None | SRR1172981 | MDR-TB | lineage4.4.1.1 | None | SRR1173063 | MDR-TB | lineage4.4.1.1 | None | SRR1173095 | MDR-TB | lineage4.4.1.1 | None | SRR1173150 | MDR-TB | lineage4.4.1.1 | None | SRR1173187 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1173252 | MDR-TB | lineage4.8 | None | SRR1173317 | MDR-TB | lineage4.4.1.1 | None | SRR1173353 | MDR-TB | lineage4.4.1.1 | None | SRR1173724 | MDR-TB | lineage4.8;lineage4.1.1.3 | None | SRR1173545 | MDR-TB | lineage4.4.1.1 | None | SRR1173499 | MDR-TB | lineage4.4.1.1 | None | SRR1173523 | MDR-TB | lineage4 | None | SRR1173595 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1173786 | MDR-TB | lineage4.4.1.1 | None | SRR1184295 | MDR-TB | lineage4.8 | None | SRR1173782 | MDR-TB | lineage4.4.1.1 | None | SRR1175083 | MDR-TB | lineage4.8 | None | SRR11786866 | MDR-TB | lineage2.2.1 | None | SRR1173861 | MDR-TB | lineage4.8;lineage4.1.1.3 | None | SRR1175355 | MDR-TB | lineage4.4.1.1 | None | SRR1184362 | MDR-TB | lineage4.8 | None | SRR1184309 | MDR-TB | lineage4.4.1.1 | None | SRR1184317 | MDR-TB | lineage4.4.1.1 | None | SRR1196512 | MDR-TB | lineage4.8 | None | SRR1196486 | MDR-TB | lineage4.4.1.1 | None | SRR1184385 | MDR-TB | lineage4.4.1.1 | None | SRR1184384 | MDR-TB | lineage4.4.1.1 | None | SRR1196505 | MDR-TB | lineage4.8 | None | SRR13232417 | MDR-TB | lineage2.2.1 | None | SRR1196716 | MDR-TB | lineage4.4.1.1 | None | SRR13232411 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196558 | MDR-TB | lineage4.4.1.1 | None | SRR1196553 | MDR-TB | lineage4.4.1.1 | None | SRR13232396 | MDR-TB | lineage2.2.1 | None | SRR13232601 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082004 | Pre-XDR-TB | lineage4.3.3 | None | ERR11067738 | MDR-TB | lineage2.2.1 | None | SRR13232650 | MDR-TB | lineage2.2.1 | None | SRR18715412 | MDR-TB | lineage2.2.1 | None | SRR19295645 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR22175263 | Pre-XDR-TB | lineage4.8 | None | SRR22351860 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081223 | MDR-TB | lineage4.3.3 | None | SRR23938632 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938686 | MDR-TB | lineage2.2.1 | None | SRR23938621 | MDR-TB | lineage2.2.1 | None | SRR23938672 | MDR-TB | lineage2.2.1 | None | SRR23938663 | MDR-TB | lineage2.2.1 | None | ERR9806836 | MDR-TB | lineage4.4.1.1 | None | ERR9806649 | MDR-TB | lineage4.4.1.1 | None | ERR10610092 | MDR-TB | lineage4.4.1.1 | None | ERR10610045 | MDR-TB | lineage4.4.1.1 | None | ERR2041682 | MDR-TB | lineage4.2.1 | rs | SAMN02586000 | MDR-TB | lineage4.4.1.1 | za | SAMN02053774 | MDR-TB | lineage4.4.1.1 | za | ERR4812896 | MDR-TB | lineage4.3.4.2 | pe | SAMN02403494 | MDR-TB | lineage4.4.1.1 | za | SAMN02586002 | MDR-TB | lineage4.4.1.1 | za | ERR2041805 | MDR-TB | lineage4.2.1 | rs | SAMN02586037 | MDR-TB | lineage4.4.1.1 | za | SAMN02586004 | MDR-TB | lineage4.4.1.1 | za | SAMN02403515 | MDR-TB | lineage4.4.1.1 | za | SAMN02403581 | MDR-TB | lineage4.4.1.1 | za | ERR2677426 | MDR-TB | lineage2.2.1 | de | SAMN02350474 | MDR-TB | lineage4.4.1.1 | za | ERR4819093 | Other | lineage4.3.3 | None | ERR2516367 | MDR-TB | lineage2.2.1 | be | ERR2515636 | MDR-TB | lineage4.4.1.1 | za | ERR2516647 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR4035746 | Sensitive | lineage4.1.2 | None | SAMN02403598 | MDR-TB | lineage4.8 | za | ERR2516883 | MDR-TB | lineage3 | gb | ERR2515713 | MDR-TB | lineage4.8 | za | SAMN02403495 | MDR-TB | lineage4.4.1.1 | za | SAMN02403580 | MDR-TB | lineage4.4.1.1 | za | ERR2515152 | MDR-TB | lineage4.8 | za | ERR4827904 | MDR-TB | lineage2.2.1 | None | ERR2515242 | MDR-TB | lineage4.4.1.1 | za | ERR4822394 | Pre-XDR-TB | lineage2.2.1 | kg | ERR4827455 | MDR-TB | lineage2.2.1 | None | ERR4827902 | MDR-TB | lineage2.2.1 | None | ERR4830499 | MDR-TB | lineage4.4.1.1 | za | ERR4827579 | MDR-TB | lineage2.2.1 | None | SAMN02403599 | MDR-TB | lineage4.8 | za | ERR4830490 | MDR-TB | lineage4.4.1.1 | za | ERR2864236 | MDR-TB | lineage4.3.4.1 | pt | ERR4830562 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4830561 | Pre-XDR-TB | lineage4.4.1.1 | None | SAMN02053755 | MDR-TB | lineage4.4.1.1 | za | ERR4828482 | MDR-TB | lineage2.2.1 | vn | SAMN02053771 | MDR-TB | lineage4.4.1.1 | za | SRR6785414 | MDR-TB | lineage2.2.1 | None | SAMN02403535 | MDR-TB | lineage4.4.1.1 | za | SRR6256987 | MDR-TB | lineage2.2.1 | None | SAMN02403514 | Pre-XDR-TB | lineage4.4.1.1 | za | SRR6511623 | MDR-TB | lineage4.3.4.1 | None | ERR4831602 | MDR-TB | lineage2.1 | vn | SRR6855777 | MDR-TB | lineage4.8 | None | SAMN02586007 | MDR-TB | lineage4.8 | za |
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