Rv0668 - p.Val1039Ala


Drug resistance types
0 Sensitive 2 RR-TB 1 HR-TB 255 MDR-TB 73 Pre-XDR-TB 20 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.1 108
lineage4.4.1.1 155
lineage2.2.1.1 6
lineage4.1.2.1.1 1
lineage4.8 38
lineage3 3
lineage4.1.2.1 3
lineage4.3.3 7
lineage4.2.1 2
lineage4.1.1.3;lineage4.8 4
lineage4.5 2
lineage4.3.4.1 9
lineage2.2.2 5
2
lineage4.6.2.2 4
lineage6.3.3 1
lineage4.3.4.2 1
spoligotype Counts
spoligotype Count
None 351
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR24828595 Pre-XDR-TB lineage2.2.1 None
SRR833014 MDR-TB lineage4.4.1.1 None
SRR1173782 MDR-TB lineage4.4.1.1 None
ERR4827579 MDR-TB lineage2.2.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
ERR985424 RR-TB lineage2.2.1.1 None
SAMN02586000 MDR-TB lineage4.4.1.1 za
SRR10315532 MDR-TB lineage4.4.1.1 None
SRR1173353 MDR-TB lineage4.4.1.1 None
ERR4809173 MDR-TB lineage4.4.1.1 za
ERR7737738 MDR-TB lineage4.4.1.1 None
ERR8975948 XDR-TB lineage4.4.1.1 None
ERR3794369 MDR-TB lineage2.2.1 None
SRR28706484 Pre-XDR-TB lineage2.2.1 None
SAMN02053771 MDR-TB lineage4.4.1.1 za
ERR11798601 MDR-TB lineage2.2.1 None
ERR4827455 MDR-TB lineage2.2.1 None
ERR4830490 MDR-TB lineage4.4.1.1 za
ERR760858 MDR-TB lineage4.1.2.1.1 ar
ERR11488717 MDR-TB lineage4.4.1.1 None
ERR7911446 MDR-TB lineage4.4.1.1 za
SAMN02586002 MDR-TB lineage4.4.1.1 za
SRR9971178 MDR-TB lineage4.8 None
SAMN02403494 MDR-TB lineage4.4.1.1 za
SRR832997 MDR-TB lineage4.4.1.1 None
ERR9029377 MDR-TB lineage4.4.1.1 None
SRR1169150 MDR-TB lineage4.4.1.1 None
SRR29056168 MDR-TB lineage4.8 None
SRR24710080 MDR-TB lineage2.2.1 None
SRR29016821 MDR-TB lineage3 None
SRR1165266 MDR-TB lineage4.4.1.1 None
SRR28393590 MDR-TB lineage2.2.1 None
SRR29273738 MDR-TB lineage4.1.2.1 None
ERR2515242 MDR-TB lineage4.4.1.1 za
SRR1173095 MDR-TB lineage4.4.1.1 None
ERR3639821 Pre-XDR-TB lineage4.3.3 None
ERR13289310 MDR-TB lineage4.4.1.1 None
ERR10748251 MDR-TB lineage4.4.1.1 None
ERR9993129 XDR-TB lineage4.4.1.1 None
SRR1184384 MDR-TB lineage4.4.1.1 None
SRR1173786 MDR-TB lineage4.4.1.1 None
SRR28706524 MDR-TB lineage2.2.1 None
SRR24709887 MDR-TB lineage2.2.1 None
SRR29539650 Pre-XDR-TB lineage4.3.3 None
SRR10430385 Pre-XDR-TB lineage2.2.1 None
ERR9992640 XDR-TB lineage4.4.1.1 None
SRR1140924 Pre-XDR-TB lineage4.4.1.1 None
ERR2041805 MDR-TB lineage4.2.1 rs
ERR8975509 XDR-TB lineage4.4.1.1 None
ERR7737649 MDR-TB lineage4.4.1.1 None
SRR1167279 MDR-TB lineage4.1.1.3;lineage4.8 None
SRR1173339 MDR-TB lineage4.4.1.1 None
ERR9992983 XDR-TB lineage4.4.1.1 None
ERR9993071 XDR-TB lineage4.4.1.1 None
ERR10748445 MDR-TB lineage4.4.1.1 None
SRR924221 Pre-XDR-TB lineage4.4.1.1 None
ERR11081223 MDR-TB lineage4.3.3 None
SRR28706434 MDR-TB lineage2.2.1 None
ERR3273089 MDR-TB lineage4.5 None
SRR28394234 MDR-TB lineage4.3.4.1 None
SRR1173499 MDR-TB lineage4.4.1.1 None
SRR1196716 MDR-TB lineage4.4.1.1 None
ERR6362920 MDR-TB lineage4.8 None
SRR1173321 MDR-TB lineage4.4.1.1 None
ERR11488439 MDR-TB lineage4.4.1.1 None
ERR4799796 XDR-TB lineage4.8 in
SRR11349195 MDR-TB lineage4.4.1.1 None
SRR10303333 Pre-XDR-TB lineage2.2.1 None
ERR9993193 Pre-XDR-TB lineage2.2.2 None
SRR24709950 Pre-XDR-TB lineage2.2.1 None
ERR5866408 MDR-TB lineage2.2.1 None
ERR9806649 MDR-TB lineage4.4.1.1 None
SRR29056148 MDR-TB lineage4.4.1.1 None
SRR25207379 MDR-TB lineage2.2.2 None
ERR845935 MDR-TB lineage4.3.4.1 pe
ERR9993107 XDR-TB lineage4.4.1.1 None
SAMN02403580 MDR-TB lineage4.4.1.1 za
SRR24709914 MDR-TB lineage2.2.1 None
ERR2516367 MDR-TB lineage2.2.1 be
SRR24710114 Pre-XDR-TB lineage2.2.1 None
SRR6256987 MDR-TB lineage2.2.1 None
SAMN02586007 MDR-TB lineage4.8 za
SRR9971278 Pre-XDR-TB lineage4.8 None
SRR28706490 MDR-TB lineage2.2.1 None
SAMN02586042 MDR-TB lineage4.8 za
SRR28706590 Pre-XDR-TB lineage2.2.1 None
SRR10303313 MDR-TB lineage2.2.1 None
SRR28394265 Pre-XDR-TB lineage4.3.4.1 None
ERR4553561 MDR-TB None
ERR11775604 MDR-TB lineage4.8 None
SRR18715412 MDR-TB lineage2.2.1 None
SRR28706391 Pre-XDR-TB lineage2.2.1 None
SRR28393814 MDR-TB lineage4.3.4.1 None
SRR28706421 MDR-TB lineage2.2.1 None
SRR28351345 Pre-XDR-TB lineage4.8 None
ERR9992627 XDR-TB lineage4.4.1.1 None
SRR10315616 Pre-XDR-TB lineage4.4.1.1 None
ERR10748224 MDR-TB lineage4.4.1.1 None
ERR11082004 Pre-XDR-TB lineage4.3.3 None
SAMN02403581 MDR-TB lineage4.4.1.1 za
ERR13290960 MDR-TB lineage4.5 None
ERR7911438 MDR-TB lineage4.4.1.1 za
ERR3794459 MDR-TB lineage2.2.1 None
ERR13276326 MDR-TB lineage4.3.3 None
SRR24710168 Pre-XDR-TB lineage2.2.1 None
SRR24710219 MDR-TB lineage2.2.1 None
SRR1167324 MDR-TB lineage4.4.1.1 None
SRR9971188 Pre-XDR-TB lineage4.4.1.1 None
SRR1184309 MDR-TB lineage4.4.1.1 None
SRR28706684 MDR-TB lineage2.2.1 None
SRR9971052 MDR-TB lineage4.4.1.1 None
SRR9971177 MDR-TB lineage4.4.1.1 None
SRR1169148 MDR-TB lineage4.4.1.1 None
SRR1165328 MDR-TB lineage4.1.1.3;lineage4.8 None
SRR1167316 Pre-XDR-TB lineage4.4.1.1 None
ERR8774488 MDR-TB lineage4.6.2.2 None
SRR24828592 Pre-XDR-TB lineage2.2.1 None
SAMN02350474 MDR-TB lineage4.4.1.1 za
SRR9971191 MDR-TB lineage4.4.1.1 None
ERR4423766 MDR-TB lineage4.6.2.2 None
ERR10748259 MDR-TB lineage4.4.1.1 None
SRR13232601 Pre-XDR-TB lineage2.2.1 None
ERR10680124 MDR-TB lineage6.3.3 None
ERR9119823 MDR-TB lineage4.8 None
ERR9992632 XDR-TB lineage4.4.1.1 None
SAMN02053755 MDR-TB lineage4.4.1.1 za
ERR6866442 MDR-TB lineage4.3.4.1 None
SRR23938663 MDR-TB lineage2.2.1 None
SRR24710132 Pre-XDR-TB lineage2.2.1 None
ERR7737920 MDR-TB lineage4.4.1.1 None
SRR9971366 Pre-XDR-TB lineage4.4.1.1 None
ERR7737802 MDR-TB lineage4.4.1.1 None
SRR19295645 Pre-XDR-TB lineage2.2.1.1 None
ERR11043777 MDR-TB lineage2.2.1 None
SRR10430381 MDR-TB lineage2.2.1 None
ERR9993151 Pre-XDR-TB lineage4.4.1.1 None
SRR1173861 MDR-TB lineage4.1.1.3;lineage4.8 None
ERR11049931 MDR-TB lineage2.2.1 None
SRR1167304 MDR-TB lineage4.4.1.1 None
ERR8975810 Pre-XDR-TB lineage4.4.1.1 None
ERR4796775 Pre-XDR-TB lineage2.2.1.1 in
SRR9971130 Pre-XDR-TB lineage4.4.1.1 None
ERR2515152 MDR-TB lineage4.8 za
SRR9970996 XDR-TB lineage4.4.1.1 None
SRR24710121 MDR-TB lineage2.2.1 None
SAMN02586004 MDR-TB lineage4.4.1.1 za
SRR24710275 Pre-XDR-TB lineage2.2.1 None
ERR3794453 MDR-TB lineage2.2.1 None
ERR11773742 MDR-TB lineage4.8 None
ERR3794516 MDR-TB lineage2.2.1 None
SRR9971175 MDR-TB lineage4.8 None
ERR2677426 MDR-TB lineage2.2.1 de
SRR1196553 MDR-TB lineage4.4.1.1 None
SRR9971152 MDR-TB lineage4.8 None
ERR10610092 MDR-TB lineage4.4.1.1 None
SRR24710056 Pre-XDR-TB lineage2.2.1 None
SRR1169149 MDR-TB lineage4.8 None
SRR1165719 MDR-TB lineage4.8 None
SRR1173252 MDR-TB lineage4.8 None
SRR1175355 MDR-TB lineage4.4.1.1 None
ERR2515636 MDR-TB lineage4.4.1.1 za
ERR2516883 MDR-TB lineage3 gb
ERR7737747 MDR-TB lineage4.4.1.1 None
ERR11773735 Pre-XDR-TB lineage4.4.1.1 None
ERR2515713 MDR-TB lineage4.8 za
SRR6856035 MDR-TB lineage4.4.1.1 None
SRR29385488 MDR-TB lineage2.2.1 None
SRR24828605 Pre-XDR-TB lineage2.2.1 None
ERR10680140 RR-TB lineage4.3.3 None
SRR1169310 MDR-TB lineage4.4.1.1 None
SRR24709995 MDR-TB lineage2.2.1 None
ERR2864236 MDR-TB lineage4.3.4.1 pt
ERR3639741 MDR-TB lineage2.2.1 None
SRR24710097 Pre-XDR-TB lineage2.2.1 None
SRR10040527 MDR-TB lineage2.2.1 None
SRR10303292 MDR-TB lineage2.2.1 None
SRR24710197 MDR-TB lineage2.2.1 None
ERR4809298 MDR-TB lineage4.4.1.1 za
SRR1167345 MDR-TB lineage4.4.1.1 None
SRR1165715 MDR-TB lineage4.8 None
SRR833117 MDR-TB lineage4.4.1.1 None
SRR9971027 MDR-TB lineage4.4.1.1 None
SRR10303329 MDR-TB lineage2.2.1 None
ERR11488438 HR-TB lineage4.4.1.1 None
SRR13232417 MDR-TB lineage2.2.1 None
ERR8975512 XDR-TB lineage4.4.1.1 None
ERR4799169 Pre-XDR-TB lineage4.8 in
SRR13232396 MDR-TB lineage2.2.1 None
SRR24710221 Pre-XDR-TB lineage2.2.1 None
SRR1167344 MDR-TB lineage4.4.1.1 None
SRR28706389 MDR-TB lineage2.2.1 None
SRR28706666 MDR-TB lineage2.2.1 None
SRR28706428 MDR-TB lineage2.2.1 None
ERR11773800 Pre-XDR-TB lineage2.2.1 None
SRR28706486 MDR-TB lineage2.2.1 None
SRR27069449 MDR-TB lineage2.2.1.1 None
ERR10748274 MDR-TB lineage4.4.1.1 None
SRR28706579 Pre-XDR-TB lineage2.2.1 None
SRR29273880 MDR-TB lineage4.1.2.1 None
SRR1173317 MDR-TB lineage4.4.1.1 None
ERR13289472 MDR-TB lineage2.2.1 None
ERR13289309 Pre-XDR-TB lineage4.4.1.1 None
ERR8774487 MDR-TB lineage4.6.2.2 None
SRR1184317 MDR-TB lineage4.4.1.1 None
ERR11488715 MDR-TB lineage4.8 None
ERR13232763 MDR-TB lineage2.2.1 None
SRR29289220 Pre-XDR-TB lineage3 None
SRR1184362 MDR-TB lineage4.8 None
SRR1196558 MDR-TB lineage4.4.1.1 None
SRR833017 MDR-TB lineage4.4.1.1 None
SRR24710252 Pre-XDR-TB lineage2.2.1 None
SRR1196505 MDR-TB lineage4.8 None
SRR24710146 MDR-TB lineage2.2.1 None
SRR28706630 Pre-XDR-TB lineage2.2.1 None
ERR13260591 MDR-TB lineage2.2.1 None
SRR29273700 MDR-TB lineage4.1.2.1 None
ERR4812896 MDR-TB lineage4.3.4.2 pe
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR1169201 MDR-TB lineage4.8 None
SRR1172261 MDR-TB lineage4.8 None
SRR1172353 MDR-TB lineage4.4.1.1 None
SRR28351355 MDR-TB lineage4.8 None
ERR2041682 MDR-TB lineage4.2.1 rs
SRR6511623 MDR-TB lineage4.3.4.1 None
ERR7911437 MDR-TB lineage4.4.1.1 za
ERR13283984 MDR-TB lineage2.2.1 None
SRR9971251 MDR-TB lineage4.4.1.1 None
ERR9992789 XDR-TB lineage4.4.1.1 None
ERR9992801 Pre-XDR-TB lineage2.2.2 None
SRR833018 MDR-TB lineage4.4.1.1 None
ERR4830499 MDR-TB lineage4.4.1.1 za
SAMN01925652 Pre-XDR-TB lineage4.4.1.1 None
ERR10465911 MDR-TB lineage4.3.3 None
SRR9971105 XDR-TB lineage4.4.1.1 None
SRR28394036 MDR-TB lineage4.3.4.1 None
SRR13232650 MDR-TB lineage2.2.1 None
ERR7911203 MDR-TB lineage4.4.1.1 za
ERR4423765 MDR-TB lineage4.6.2.2 None
SRR9971199 MDR-TB lineage4.4.1.1 None
ERR11488976 MDR-TB lineage4.4.1.1 None
SRR1019153 MDR-TB lineage4.4.1.1 None
ERR11488919 MDR-TB lineage4.4.1.1 None
ERR11067738 MDR-TB lineage2.2.1 None
SRR1165668 MDR-TB lineage4.4.1.1 None
ERR4822394 XDR-TB lineage2.2.1 kg
SRR10430348 MDR-TB lineage2.2.1 None
SAMN02053774 MDR-TB lineage4.4.1.1 za
SRR1169314 MDR-TB lineage4.4.1.1 None
SRR23938632 Pre-XDR-TB lineage2.2.1 None
ERR5866406 MDR-TB lineage2.2.1 None
ERR5866407 MDR-TB lineage2.2.1 None
ERR7737666 MDR-TB lineage4.4.1.1 None
SRR9971365 Pre-XDR-TB lineage4.4.1.1 None
SRR9971316 Pre-XDR-TB lineage4.4.1.1 None
SRR24710254 Pre-XDR-TB lineage2.2.1 None
ERR9806836 MDR-TB lineage4.4.1.1 None
ERR4827904 MDR-TB lineage2.2.1 None
SRR23938621 MDR-TB lineage2.2.1 None
ERR9992837 XDR-TB lineage4.4.1.1 None
ERR7737788 MDR-TB lineage4.4.1.1 None
SRR10040511 MDR-TB lineage2.2.1 None
SRR25515573 MDR-TB lineage2.2.1 None
SRR1140899 MDR-TB lineage4.4.1.1 None
ERR7737688 MDR-TB lineage4.4.1.1 None
SRR1196486 MDR-TB lineage4.4.1.1 None
SRR6785414 MDR-TB lineage2.2.1 None
SRR24709872 MDR-TB lineage2.2.1 None
SRR1173724 MDR-TB lineage4.1.1.3;lineage4.8 None
SRR1165620 MDR-TB lineage4.4.1.1 None
SAMN02403515 MDR-TB lineage4.4.1.1 za
ERR3794515 MDR-TB lineage2.2.1 None
ERR4798005 Pre-XDR-TB lineage4.8 in
SRR10430317 MDR-TB lineage2.2.1 None
SAMN02403514 Pre-XDR-TB lineage4.4.1.1 za
ERR4827902 MDR-TB lineage2.2.1 None
SRR23938686 MDR-TB lineage2.2.1 None
ERR3794464 MDR-TB lineage2.2.1 None
SRR22351860 Pre-XDR-TB lineage2.2.1 None
SRR847797 Pre-XDR-TB lineage4.4.1.1 za
ERR10748185 MDR-TB lineage4.4.1.1 None
SAMN02403535 MDR-TB lineage4.4.1.1 za
SRR26159037 Pre-XDR-TB lineage2.2.1.1 None
SRR24710013 Pre-XDR-TB lineage2.2.1 None
SRR9971171 MDR-TB lineage4.4.1.1 None
ERR5917967 Pre-XDR-TB lineage4.4.1.1 za
SRR6855777 MDR-TB lineage4.8 None
SRR9970998 MDR-TB lineage4.8 None
SRR11786866 MDR-TB lineage2.2.1 None
ERR3794480 MDR-TB lineage2.2.1 None
ERR7737904 MDR-TB lineage4.4.1.1 None
SRR1165244 MDR-TB lineage4.4.1.1 None
SRR29772603 Pre-XDR-TB lineage2.2.1.1 None
ERR9992643 Pre-XDR-TB lineage4.4.1.1 None
ERR4830561 Pre-XDR-TB lineage4.4.1.1 None
SRR23938672 MDR-TB lineage2.2.1 None
SRR10315463 MDR-TB lineage4.4.1.1 None
SRR11349203 MDR-TB lineage4.4.1.1 None
ERR10610045 MDR-TB lineage4.4.1.1 None
SRR24828591 Pre-XDR-TB lineage2.2.1 None
SRR1169293 MDR-TB lineage4.8 None
ERR10748268 MDR-TB lineage4.4.1.1 None
SRR1165254 Pre-XDR-TB lineage4.4.1.1 None
SRR10430342 MDR-TB lineage2.2.1 None
ERR4830562 Pre-XDR-TB lineage4.4.1.1 None
SRR24710060 Pre-XDR-TB lineage2.2.1 None
SAMN02403495 MDR-TB lineage4.4.1.1 za
SRR1165701 MDR-TB lineage4.8 None
SRR24709976 XDR-TB lineage2.2.1 None
ERR10748180 MDR-TB lineage4.4.1.1 None
SRR1172777 MDR-TB lineage4.4.1.1 None
ERR11774892 Pre-XDR-TB lineage4.4.1.1 None
ERR9992997 XDR-TB lineage2.2.2 None
SRR1173187 Pre-XDR-TB lineage4.4.1.1 None
SRR24710260 MDR-TB lineage2.2.1 None
SAMN02403599 MDR-TB lineage4.8 za
SAMN02586037 MDR-TB lineage4.4.1.1 za
ERR13260352 MDR-TB lineage2.2.1 None
SRR1173595 Pre-XDR-TB lineage4.4.1.1 None
SRR1173150 MDR-TB lineage4.4.1.1 None
SRR24710195 Pre-XDR-TB lineage2.2.1 None
SRR24709972 MDR-TB lineage2.2.1 None
ERR2516647 Pre-XDR-TB lineage4.3.4.1 None
SRR28706534 MDR-TB lineage2.2.1 None
ERR7737843 MDR-TB lineage4.4.1.1 None
SRR1172090 MDR-TB lineage4.4.1.1 None
SRR28706681 Pre-XDR-TB lineage2.2.1 None
SRR28706424 MDR-TB lineage2.2.1 None
SRR28706591 MDR-TB lineage2.2.1 None
SRR28706520 MDR-TB lineage2.2.1 None
ERR11774887 Pre-XDR-TB lineage4.4.1.1 None
SRR1175083 MDR-TB lineage4.8 None
SRR28706652 MDR-TB lineage2.2.1 None
ERR13288788 XDR-TB lineage4.4.1.1 None
ERR13288934 XDR-TB lineage4.4.1.1 None
ERR13289266 MDR-TB lineage4.4.1.1 None
SRR9971286 MDR-TB lineage4.4.1.1 None
ERR13284656 MDR-TB lineage2.2.1 None
SRR28706392 MDR-TB lineage2.2.1 None
SAMN02350492 Pre-XDR-TB lineage4.4.1.1 za
SAMN02403598 MDR-TB lineage4.8 za
SRR10315510 MDR-TB lineage4.4.1.1 None
SRR10315603 MDR-TB lineage4.8 None
SRR832977 MDR-TB lineage4.4.1.1 None
SRR1184295 MDR-TB lineage4.8 None
ERR11773748 Pre-XDR-TB lineage4.4.1.1 None
ERR13266470 Pre-XDR-TB lineage4.8 None
ERR4553849 MDR-TB None
SRR1167376 MDR-TB lineage4.4.1.1 None
SRR1167386 MDR-TB lineage4.8 None
ERR13284285 MDR-TB lineage2.2.1 None
ERR4810940 MDR-TB lineage2.2.2 cn