lineage | Count |
---|---|
lineage2.2.1 | 43 |
lineage3 | 8 |
lineage4.2.1 | 1 |
lineage2.2.2 | 5 |
lineage2.2.1.1 | 8 |
lineage4.1.2.1 | 7 |
lineage4.2.2.2 | 5 |
lineage3.1.2 | 1 |
lineage4.8 | 6 |
lineage4.3.4.2.1 | 2 |
lineage2.1 | 1 |
lineage4.3.3 | 3 |
lineage3.1.2.1 | 1 |
lineage2.2.1;lineage4.2.2.2 | 1 |
lineage1.1.2;lineage4.2.2.2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.1 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.3.2 | 1 |
lineage4.1.1.3;lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 98 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR2677390 | Pre-XDR-TB | lineage2.2.1 | de |
ERR2516814 | MDR-TB | lineage3 | gb |
ERR2515322 | Pre-XDR-TB | lineage2.2.1 | za |
ERR8665591 | MDR-TB | lineage4.2.1 | None |
SRR5341436 | Pre-XDR-TB | lineage3 | in |
SRR5341355 | Pre-XDR-TB | lineage3 | in |
SRR5341450 | Pre-XDR-TB | lineage3 | in |
SRR10040180 | MDR-TB | lineage2.2.2 | None |
DRR130086 | Pre-XDR-TB | lineage2.2.1.1 | None |
SRR28393259 | MDR-TB | lineage4.1.2.1 | None |
ERR4798135 | XDR-TB | lineage4.2.2.2 | in |
ERR13290654 | MDR-TB | lineage2.2.1 | None |
ERR551645 | MDR-TB | lineage2.2.1 | None |
SRR1162959 | MDR-TB | lineage2.2.1 | None |
ERR4822370 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR3794356 | MDR-TB | lineage2.2.1 | None |
SRR28351387 | XDR-TB | lineage3.1.2 | None |
SRR1011481 | MDR-TB | lineage4.8 | None |
ERR10610322 | RR-TB | lineage4.3.4.2.1 | None |
SRR25207013 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1011480 | MDR-TB | lineage4.8 | None |
SRR26400065 | MDR-TB | lineage2.1 | None |
ERR5865860 | Pre-XDR-TB | lineage2.2.1 | None |
ERR7737792 | MDR-TB | lineage3 | None |
ERR13262015 | XDR-TB | lineage4.2.2.2 | None |
SRR21276947 | RR-TB | lineage2.2.1 | None |
ERR11773825 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11081755 | MDR-TB | lineage2.2.1 | None |
ERR4822325 | Pre-XDR-TB | lineage2.2.1 | de |
ERR11488872 | MDR-TB | lineage4.3.3 | None |
ERR13290656 | MDR-TB | lineage2.2.1 | None |
ERR987724 | RR-TB | lineage3 | None |
DRR130084 | Pre-XDR-TB | lineage2.2.1.1 | None |
SRR16088462 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11488921 | MDR-TB | lineage4.3.3 | None |
ERR551644 | MDR-TB | lineage2.2.1 | None |
ERR4796822 | Pre-XDR-TB | lineage4.2.2.2 | in |
SRR28393962 | MDR-TB | lineage4.1.2.1 | None |
SRR11662436 | MDR-TB | lineage2.2.1 | None |
SRR14781835 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28394038 | MDR-TB | lineage4.1.2.1 | None |
SRR28393960 | MDR-TB | lineage4.1.2.1 | None |
SRR28393982 | MDR-TB | lineage4.1.2.1 | None |
SRR28045393 | Pre-XDR-TB | lineage3.1.2.1 | None |
SRR1165559 | MDR-TB | lineage2.2.1 | None |
SRR28393961 | MDR-TB | lineage4.1.2.1 | None |
SRR28393655 | MDR-TB | lineage4.1.2.1 | None |
SRR1162870 | MDR-TB | lineage2.2.1 | None |
SRR21031680 | MDR-TB | lineage2.2.2 | None |
SAMEA2534087 | MDR-TB | lineage2.2.1 | uz |
SRR5709878 | MDR-TB | lineage2.2.1 | th |
SRR11662648 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13245232 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR13258004 | Pre-XDR-TB | lineage2.2.1.1 | None |
SRR5341261 | MDR-TB | lineage2.2.1;lineage4.2.2.2 | in |
SRR5341233 | MDR-TB | lineage4.2.2.2 | in |
SRR5341223 | Pre-XDR-TB | lineage1.1.2;lineage4.2.2.2 | in |
ERR5865859 | Pre-XDR-TB | lineage2.2.1 | None |
ERR9806973 | Pre-XDR-TB | lineage4.1.1.3 | None |
ERR4822302 | Pre-XDR-TB | lineage2.2.1 | de |
ERR13290655 | MDR-TB | lineage2.2.1 | None |
ERR4822349 | Pre-XDR-TB | lineage2.2.1.1 | None |
SAMN02414986 | MDR-TB | lineage2.2.1 | se |
ERR11068620 | MDR-TB | lineage4.1 | None |
ERR13258513 | Pre-XDR-TB | lineage2.2.1.1 | None |
SRR12072595 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13260579 | MDR-TB | lineage4.3.3 | None |
ERR4800011 | MDR-TB | lineage3 | in |
SRR29093124 | Pre-XDR-TB | lineage2.2.1.1 | None |
SAMN02350437 | MDR-TB | lineage4.8 | None |
SRR11662185 | MDR-TB | lineage2.2.1 | None |
ERR2503407 | MDR-TB | lineage1.2.1.2.1 | fi |
SRR18054784 | MDR-TB | lineage2.2.2 | None |
ERR11083014 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28514696 | MDR-TB | lineage4.3.2 | None |
SRR10040384 | MDR-TB | lineage2.2.2 | None |
ERR11138605 | MDR-TB | lineage2.2.2 | None |
ERR13278951 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1062852 | MDR-TB | lineage4.8 | None |
SRR6484967 | MDR-TB | lineage2.2.1 | None |
ERR13284689 | MDR-TB | lineage2.2.1 | None |
SRR8428950 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25207142 | Pre-XDR-TB | lineage2.2.1 | None |
ERR551645_ERR551644 | MDR-TB | lineage2.2.1 | None |
ERR11138628 | MDR-TB | lineage2.2.1 | None |
ERR9806816 | RR-TB | lineage4.3.4.2.1 | None |
ERR13290653 | MDR-TB | lineage2.2.1 | None |
SRR1165500 | MDR-TB | lineage2.2.1 | None |
ERR3639758 | MDR-TB | lineage2.2.1 | None |
ERR4799949 | HR-TB | lineage4.2.2.2 | in |
SRR28394219 | MDR-TB | lineage4.1.1.3;lineage4.1.2.1 | None |
SRR11662636 | MDR-TB | lineage2.2.1 | None |
ERR7911140 | RR-TB | lineage2.2.1 | vn |
SRR11662534 | MDR-TB | lineage2.2.1 | None |
SRR1062851 | MDR-TB | lineage4.8 | None |
SRR5341365 | Pre-XDR-TB | lineage3 | None |
SAMN02350438 | MDR-TB | lineage4.8 | za |
ERR1873559 | Pre-XDR-TB | lineage2.2.1 | za |