lineage | Count |
---|---|
lineage2.2.1 | 26 |
lineage4.1 | 1 |
lineage4.3.4.2.1 | 2 |
lineage2.2.2 | 2 |
lineage4.1.1.3 | 1 |
lineage4.3.3;lineage3 | 1 |
lineage4.8 | 5 |
lineage1.2.1.2.1 | 1 |
lineage4.2.2.2;lineage1.1.2 | 1 |
lineage3 | 8 |
lineage4.2.2.2 | 4 |
lineage4.2.2.2;lineage2.2.1 | 1 |
lineage2.2.1.1 | 4 |
lineage4.1.2.1 | 2 |
lineage4.2.1 | 1 |
lineage4 | 1 |
lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 62 |
ID | Drug resistance | Lineage | Country iso2 | ERR11083014 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081755 | MDR-TB | lineage2.2.1 | None | ERR11068620 | MDR-TB | lineage4.1 | None | ERR9806816 | RR-TB | lineage4.3.4.2.1 | None | ERR11138628 | MDR-TB | lineage2.2.1 | None | SRR21031680 | MDR-TB | lineage2.2.2 | None | ERR10610322 | RR-TB | lineage4.3.4.2.1 | None | ERR9806973 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2433010 | Other | lineage4.3.3;lineage3 | br | ERR1873559 | Pre-XDR-TB | lineage2.2.1 | za | ERR2677390 | Pre-XDR-TB | lineage2.2.1 | de | SAMN02350437 | MDR-TB | lineage4.8 | None | SAMN02414986 | MDR-TB | lineage2.2.1 | se | ERR2503407 | MDR-TB | lineage1.2.1.2.1 | fi | SRR5341223 | Pre-XDR-TB | lineage4.2.2.2;lineage1.1.2 | in | SRR5341436 | Pre-XDR-TB | lineage3 | in | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR2515322 | Pre-XDR-TB | lineage2.2.1 | za | SRR5341450 | Pre-XDR-TB | lineage3 | in | SRR5341233 | MDR-TB | lineage4.2.2.2 | in | SRR5341355 | Pre-XDR-TB | lineage3 | in | SRR5341261 | MDR-TB | lineage4.2.2.2;lineage2.2.1 | in | ERR2516814 | MDR-TB | lineage3 | gb | ERR4822325 | Pre-XDR-TB | lineage2.2.1 | de | SRR6484967 | MDR-TB | lineage2.2.1 | None | ERR4822302 | Pre-XDR-TB | lineage2.2.1 | de | ERR4822349 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4822370 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR5709878 | MDR-TB | lineage2.2.1 | th | SAMEA2534087 | MDR-TB | lineage2.2.1 | uz | SRR6896472 | MDR-TB | lineage4.1.2.1 | None | ERR4796822 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR8428950 | Pre-XDR-TB | lineage2.2.1 | None | DRR130086 | Pre-XDR-TB | lineage2.2.1.1 | None | SAMN02350438 | MDR-TB | lineage4.8 | za | DRR130084 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR3639758 | MDR-TB | lineage2.2.1 | None | ERR3794356 | MDR-TB | lineage2.2.1 | None | ERR4798135 | XDR-TB | lineage4.2.2.2 | in | ERR4799949 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR5865860 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800011 | MDR-TB | lineage3 | in | ERR7911140 | RR-TB | lineage2.2.1 | vn | ERR5865859 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737792 | MDR-TB | lineage3 | None | ERR8665591 | MDR-TB | lineage4.2.1 | None | SRR1011480 | MDR-TB | lineage4.8 | None | ERR987724 | RR-TB | lineage3 | None | SRR1162870 | MDR-TB | lineage2.2.1 | None | SRR1011481 | MDR-TB | lineage4 | None | SRR1062852 | MDR-TB | lineage4.8 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR2101373 | MDR-TB | lineage4.1.2.1 | None | SRR13068993 | HR-TB | lineage4.9 | None | SRR16088462 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162959 | MDR-TB | lineage2.2.1 | None | SRR1165500 | MDR-TB | lineage2.2.1 | None | SRR1165559 | MDR-TB | lineage2.2.1 | None | SRR12072595 | Pre-XDR-TB | lineage2.2.1 | None | SRR14781835 | Pre-XDR-TB | lineage2.2.1 | None | SRR18054784 | MDR-TB | lineage2.2.2 | None | SRR21276947 | RR-TB | lineage2.2.1 | None |
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