Rv0668 - p.Val1039Gly
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
5 RR-TB
1 HR-TB
56 MDR-TB
33 Pre-XDR-TB
3 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 43 |
| lineage4.2.2.2 | 5 |
| lineage2.2.1.1 | 8 |
| lineage4.3.3 | 3 |
| lineage3 | 8 |
| lineage4.3.4.2.1 | 2 |
| lineage4.8 | 6 |
| lineage4.1.2.1 | 7 |
| lineage3.1.2 | 1 |
| lineage2.1 | 1 |
| lineage2.2.2 | 5 |
| lineage4.1.1.3;lineage4.1.2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage1.1.2;lineage4.2.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 98 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21276947 | RR-TB | lineage2.2.1 | None | SRR25207013 | Pre-XDR-TB | lineage2.2.1 | None | ERR13262015 | XDR-TB | lineage4.2.2.2 | None | ERR13258513 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13260579 | MDR-TB | lineage4.3.3 | None | ERR11773825 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662185 | MDR-TB | lineage2.2.1 | None | ERR13290656 | MDR-TB | lineage2.2.1 | None | ERR13284689 | MDR-TB | lineage2.2.1 | None | ERR987724 | RR-TB | lineage3 | None | SRR25207142 | Pre-XDR-TB | lineage2.2.1 | None | ERR551645_ERR551644 | MDR-TB | lineage2.2.1 | None | ERR11138628 | MDR-TB | lineage2.2.1 | None | ERR11488921 | MDR-TB | lineage4.3.3 | None | ERR551644 | MDR-TB | lineage2.2.1 | None | ERR9806816 | RR-TB | lineage4.3.4.2.1 | None | ERR4800011 | MDR-TB | lineage3 | in | ERR4822325 | Pre-XDR-TB | lineage2.2.1 | de | SAMN02414986 | MDR-TB | lineage2.2.1 | se | ERR13290653 | MDR-TB | lineage2.2.1 | None | ERR7911140 | RR-TB | lineage2.2.1 | vn | SAMN02350438 | MDR-TB | lineage4.8 | za | ERR2515322 | Pre-XDR-TB | lineage2.2.1 | za | SRR5341450 | Pre-XDR-TB | lineage3 | in | SRR28393259 | MDR-TB | lineage4.1.2.1 | None | ERR13245232 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR5865859 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794356 | MDR-TB | lineage2.2.1 | None | SRR28351387 | XDR-TB | lineage3.1.2 | None | ERR4798135 | XDR-TB | lineage4.2.2.2 | in | ERR10610322 | RR-TB | lineage4.3.4.2.1 | None | SRR26400065 | MDR-TB | lineage2.1 | None | ERR5865860 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737792 | MDR-TB | lineage3 | None | SRR12072595 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488872 | MDR-TB | lineage4.3.3 | None | ERR11138605 | MDR-TB | lineage2.2.2 | None | ERR13278951 | Pre-XDR-TB | lineage2.2.1 | None | SRR8428950 | Pre-XDR-TB | lineage2.2.1 | None | DRR130084 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4822370 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11662436 | MDR-TB | lineage2.2.1 | None | SRR14781835 | Pre-XDR-TB | lineage2.2.1 | None | SRR28394038 | MDR-TB | lineage4.1.2.1 | None | SRR28393960 | MDR-TB | lineage4.1.2.1 | None | SRR28394219 | MDR-TB | lineage4.1.1.3;lineage4.1.2.1 | None | SRR28393982 | MDR-TB | lineage4.1.2.1 | None | SRR28045393 | Pre-XDR-TB | lineage3.1.2.1 | None | SRR28393961 | MDR-TB | lineage4.1.2.1 | None | SRR28393655 | MDR-TB | lineage4.1.2.1 | None | SRR1162870 | MDR-TB | lineage2.2.1 | None | ERR4822302 | Pre-XDR-TB | lineage2.2.1 | de | ERR8665591 | MDR-TB | lineage4.2.1 | None | SRR11662534 | MDR-TB | lineage2.2.1 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR21031680 | MDR-TB | lineage2.2.2 | None | SAMEA2534087 | MDR-TB | lineage2.2.1 | uz | ERR1873559 | Pre-XDR-TB | lineage2.2.1 | za | ERR2516814 | MDR-TB | lineage3 | gb | SRR5709878 | MDR-TB | lineage2.2.1 | th | SRR5341436 | Pre-XDR-TB | lineage3 | in | SRR5341355 | Pre-XDR-TB | lineage3 | in | SRR10040180 | MDR-TB | lineage2.2.2 | None | SRR5341261 | MDR-TB | lineage2.2.1;lineage4.2.2.2 | in | SRR5341233 | MDR-TB | lineage4.2.2.2 | in | SRR5341223 | Pre-XDR-TB | lineage1.1.2;lineage4.2.2.2 | in | ERR13290654 | MDR-TB | lineage2.2.1 | None | ERR9806973 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR551645 | MDR-TB | lineage2.2.1 | None | ERR2503407 | MDR-TB | lineage1.2.1.2.1 | fi | ERR11068620 | MDR-TB | lineage4.1 | None | SRR1011480 | MDR-TB | lineage4.8 | None | ERR11081755 | MDR-TB | lineage2.2.1 | None | SRR29093124 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR18054784 | MDR-TB | lineage2.2.2 | None | ERR11083014 | Pre-XDR-TB | lineage2.2.1 | None | SRR28514696 | MDR-TB | lineage4.3.2 | None | SRR10040384 | MDR-TB | lineage2.2.2 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | SRR1062852 | MDR-TB | lineage4.8 | None | SRR6484967 | MDR-TB | lineage2.2.1 | None | SRR16088462 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4799949 | HR-TB | lineage4.2.2.2 | in | ERR4796822 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR28393962 | MDR-TB | lineage4.1.2.1 | None | ERR4822349 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1165500 | MDR-TB | lineage2.2.1 | None | ERR3639758 | MDR-TB | lineage2.2.1 | None | SRR1165559 | MDR-TB | lineage2.2.1 | None | SRR11662636 | MDR-TB | lineage2.2.1 | None | ERR2677390 | Pre-XDR-TB | lineage2.2.1 | de | SRR11662648 | Pre-XDR-TB | lineage2.2.1 | None | DRR130086 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13258004 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1162959 | MDR-TB | lineage2.2.1 | None | ERR13290655 | MDR-TB | lineage2.2.1 | None | SRR1011481 | MDR-TB | lineage4.8 | None |
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