lineage | Count |
---|---|
lineage4 | 3 |
lineage4.3.2.1 | 1 |
lineage4.6.1.2 | 1 |
lineage2.2.1 | 8 |
lineage4.8 | 3 |
lineage2.2.1.1 | 2 |
lineage4.5 | 1 |
lineage2.1 | 1 |
lineage2.2 | 1 |
lineage4.2;lineage2.2.1 | 1 |
1 | |
lineage4.1.4 | 2 |
lineage4.3.2 | 16 |
lineage4.9 | 1 |
lineage4.2.2.2 | 2 |
lineage3 | 1 |
lineage4.4.1.1 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 47 |
ID | Drug resistance | Lineage | Country iso2 | ERR4553981 | MDR-TB | lineage4 | None | ERR4809334 | MDR-TB | lineage4.3.2.1 | za | ERR6358843 | MDR-TB | lineage4.6.1.2 | None | SRR11662250 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165666 | MDR-TB | lineage4 | None | SRR1174827 | MDR-TB | lineage4.8 | None | SRR1167346 | MDR-TB | lineage4 | None | SRR1169081 | MDR-TB | lineage4.8 | None | SRR16370258 | MDR-TB | lineage2.2.1 | None | SRR26159064 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR20969371 | MDR-TB | lineage4.5 | None | SRR11828962 | MDR-TB | lineage2.1 | None | SRR21279414 | Pre-XDR-TB | lineage2.2 | None | SRR6824379 | Pre-XDR-TB | lineage2.2.1 | cn | SRR25207061 | MDR-TB | lineage4.2;lineage2.2.1 | None | SRR26159062 | MDR-TB | None | SRR1723619 | Pre-XDR-TB | lineage2.2.1 | cn | ERR751497 | RR-TB | lineage4.1.4 | pe | SRR3724660 | MDR-TB | lineage4.3.2 | cd | SAMN02403612 | MDR-TB | lineage4.8 | za | ERR2707140 | MDR-TB | lineage4.3.2 | cd | ERR2706918 | MDR-TB | lineage4.3.2 | cd | ERR2707164 | MDR-TB | lineage4.3.2 | cd | ERR2707093 | MDR-TB | lineage4.3.2 | cd | ERR2706946 | MDR-TB | lineage4.3.2 | cd | ERR7911163 | MDR-TB | lineage2.2.1 | vn | ERR2707032 | MDR-TB | lineage4.3.2 | cd | ERR2707034 | MDR-TB | lineage4.3.2 | cd | ERR2652925 | HR-TB | lineage4.9 | None | ERR2706963 | MDR-TB | lineage4.3.2 | cd | ERR2706937 | MDR-TB | lineage4.3.2 | cd | ERR2707118 | MDR-TB | lineage4.3.2 | cd | ERR4796333 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR4822383 | MDR-TB | lineage2.2.1 | kg | ERR4811317 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4796792 | MDR-TB | lineage4.2.2.2 | in | ERR2510472 | MDR-TB | lineage3 | pk | ERR4799632 | Pre-XDR-TB | lineage2.2.1 | in | ERR2510226 | RR-TB | lineage4.1.4 | pe | ERR4829752 | Pre-XDR-TB | lineage4.4.1.1 | it | ERR11798675 | MDR-TB | lineage4.2.1 | None | ERR4423611 | Pre-XDR-TB | lineage4.3.2 | None | ERR4423612 | Pre-XDR-TB | lineage4.3.2 | None | ERR4423618 | Pre-XDR-TB | lineage4.3.2 | None | ERR3273154 | RR-TB | lineage2.2.1.1 | None | ERR4423617 | Pre-XDR-TB | lineage4.3.2 | None | ERR4423613 | Pre-XDR-TB | lineage4.3.2 | None |
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