Rv0668 - p.Val1252Met
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
5 RR-TB
4 HR-TB
148 MDR-TB
27 Pre-XDR-TB
3 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 5 |
| lineage3.1.1 | 62 |
| lineage4.1.1.1 | 3 |
| lineage2.2.1 | 32 |
| lineage4.8 | 1 |
| lineage4.4.2 | 9 |
| lineage4.3.3 | 31 |
| lineage2.2.1.1 | 2 |
| lineage3 | 14 |
| lineage1.2.2.2 | 2 |
| lineage4.3.2 | 3 |
| lineage4.2.1.1 | 7 |
| lineage4.3.4.2.1 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.1.2.1;lineage4.3.3 | 2 |
| lineage2.1 | 3 |
| lineage4.5 | 5 |
| lineage4.6.1.2 | 3 |
| lineage4.4.1.1 | 1 |
| lineage3.1;lineage4.2.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4 | 1 |
| lineage2.2.2 | 1 |
| lineage1.1.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 194 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3105741 | Pre-XDR-TB | lineage4.2.1 | None | ERR4423701 | RR-TB | lineage3.1.1 | None | SRR29017393 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR1165540 | MDR-TB | lineage2.2.1 | None | SRR29017059 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR5865968 | MDR-TB | lineage4.8 | None | ERR4423689 | Other | lineage3.1.1 | None | SRR1166937 | MDR-TB | lineage3.1.1 | None | ERR4423686 | MDR-TB | lineage3.1.1 | None | ERR13290279 | MDR-TB | lineage2.2.1 | None | SRR5535908 | MDR-TB | lineage3.1.1 | None | ERR4553949 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR29772681 | MDR-TB | lineage2.2.1 | None | SRR12062529 | Pre-XDR-TB | lineage4.4.2 | None | ERR4024963 | MDR-TB | lineage4.3.3 | None | ERR4423662 | MDR-TB | lineage3.1.1 | None | ERR4423660 | MDR-TB | lineage3.1.1 | None | SRR5149238 | HR-TB | lineage2.2.1.1 | None | ERR4024715 | MDR-TB | lineage4.3.3 | None | ERR16022316 | MDR-TB | lineage3 | None | SRR18054796 | MDR-TB | lineage2.2.1 | None | ERR4024945 | MDR-TB | lineage4.3.3 | None | SRR5535916 | MDR-TB | lineage3.1.1 | None | ERR3335802 | MDR-TB | lineage3 | pk | ERR4423687 | HR-TB | lineage3.1.1 | None | ERR4423666 | Other | lineage3.1.1 | None | ERR13284224 | MDR-TB | lineage3.1.1 | None | ERR5866557 | MDR-TB | lineage2.2.1 | None | ERR4799333 | Pre-XDR-TB | lineage3 | in | SRR10040497 | MDR-TB | lineage4.4.2 | None | SRR29053036 | MDR-TB | lineage4.3.3 | None | ERR4024620 | MDR-TB | lineage4.3.3 | None | ERR4797812 | Pre-XDR-TB | lineage1.2.2.2 | in | SRR5535911 | MDR-TB | lineage3.1.1 | None | SRR16370416 | MDR-TB | lineage4.3.3 | None | ERR4798273 | Pre-XDR-TB | lineage3 | in | SAMN02414859 | MDR-TB | lineage2.2.1 | se | ERR4423655 | Other | lineage3.1.1 | None | ERR4423661 | MDR-TB | lineage3.1.1 | None | ERR4423695 | RR-TB | lineage3.1.1 | None | SAMN02414976 | MDR-TB | lineage3.1.1 | se | ERR3287379 | MDR-TB | lineage4.3.3 | pe | ERR751598 | MDR-TB | lineage4.3.3 | pe | SRR25207240 | Pre-XDR-TB | lineage2.2.1 | None | ERR779911 | MDR-TB | lineage4.3.3 | pe | ERR7911038 | MDR-TB | lineage4.2.1 | md | ERR751614 | MDR-TB | lineage4.3.3 | pe | ERR775367 | MDR-TB | lineage4.3.3 | pe | ERR7911693 | Pre-XDR-TB | lineage2.2.1 | za | ERR4972491 | Pre-XDR-TB | lineage4.3.2 | None | ERR8665965 | MDR-TB | lineage4.2.1.1 | None | ERR8665966 | MDR-TB | lineage4.2.1.1 | None | ERR2516808 | MDR-TB | lineage4.3.4.2.1 | gb | ERR2517062 | MDR-TB | lineage4.3.4.2.1 | gb | ERR2516419 | MDR-TB | lineage4.3.3 | nl | ERR2516604 | MDR-TB | lineage3 | nl | SRR13232729 | MDR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR25207370 | MDR-TB | lineage2.2.1 | None | SRR833162 | MDR-TB | lineage4.3.3 | None | SRR1166932 | MDR-TB | lineage2.2.1 | None | ERR12117895 | MDR-TB | lineage4.3.3 | None | ERR4796484 | Pre-XDR-TB | lineage1.2.2.2 | in | SRR1166864 | MDR-TB | lineage2.2.1 | None | SRR5535917 | MDR-TB | lineage3.1.1 | None | ERR6879053 | MDR-TB | lineage4.1.2.1;lineage4.3.3 | None | SRR12062528 | Pre-XDR-TB | lineage4.4.2 | None | SRR10040157 | Pre-XDR-TB | lineage4.4.2 | None | ERR4423703 | MDR-TB | lineage3.1.1 | None | ERR3077971 | MDR-TB | lineage3.1.1 | None | ERR4423667 | Other | lineage3.1.1 | None | SRR5535892 | MDR-TB | lineage3.1.1 | None | ERR4423699 | MDR-TB | lineage3.1.1 | None | ERR11080875 | MDR-TB | lineage4.2.1.1 | None | SRR16370545 | MDR-TB | lineage2.1 | None | ERR13290625 | MDR-TB | lineage3.1.1 | None | ERR13290278 | MDR-TB | lineage2.2.1 | None | SRR5535915 | MDR-TB | lineage3.1.1 | None | ERR4423685 | MDR-TB | lineage3.1.1 | None | ERR4423696 | Other | lineage3.1.1 | None | SRR5535910 | MDR-TB | lineage3.1.1 | None | SRR5535907 | MDR-TB | lineage3.1.1 | None | SRR1165446 | MDR-TB | lineage3.1.1 | None | ERR9119857 | MDR-TB | lineage2.2.1 | None | SRR1162878 | MDR-TB | lineage3.1.1 | None | SRR5535920 | MDR-TB | lineage3.1.1 | None | ERR6879052 | MDR-TB | lineage4.3.3 | None | ERR4423656 | MDR-TB | lineage3.1.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR11081075 | MDR-TB | lineage3.1.1 | None | ERR11081372 | MDR-TB | lineage2.2.1 | None | SRR29017053 | MDR-TB | lineage4.5 | None | ERR13290280 | MDR-TB | lineage2.2.1 | None | ERR13290622 | MDR-TB | lineage3.1.1 | None | SRR23340066 | MDR-TB | lineage4.2.1.1 | None | SRR29017443 | MDR-TB | lineage4.5 | None | SRR5535913 | MDR-TB | lineage3.1.1 | None | ERR6865573 | MDR-TB | lineage4.3.3 | None | SAMN02053768 | MDR-TB | lineage4.3.3 | za | SRR5535914 | MDR-TB | lineage3.1.1 | None | ERR15686451 | MDR-TB | lineage3 | None | SRR21276948 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807627 | XDR-TB | lineage2.2.1 | None | ERR4423664 | Other | lineage3.1.1 | None | SRR1162741 | MDR-TB | lineage2.2.1 | None | SRR29772800 | Pre-XDR-TB | lineage3 | None | SRR1162709 | MDR-TB | lineage2.2.1 | None | ERR751556 | MDR-TB | lineage4.3.3 | pe | ERR779902 | MDR-TB | lineage4.3.3 | pe | ERR4423672 | MDR-TB | lineage3.1.1 | None | ERR3077999 | MDR-TB | lineage3.1.1 | None | ERR4553752 | MDR-TB | lineage4.5 | None | ERR10762411 | MDR-TB | lineage4.2.1 | None | ERR4972536 | HR-TB | lineage4.3.2 | None | ERR4799051 | HR-TB | lineage3 | in | SRR1165553 | MDR-TB | lineage2.2.1 | None | SRR25207359 | Pre-XDR-TB | lineage2.2.1 | None | SRR833140 | MDR-TB | lineage4.3.3 | None | ERR4423694 | MDR-TB | lineage3.1.1 | None | SRR5535922 | MDR-TB | lineage3.1.1 | None | ERR1034804 | MDR-TB | lineage4.3.3 | pe | ERR13290623 | MDR-TB | lineage3.1.1 | None | ERR13285930 | MDR-TB | lineage4.2.1 | None | SRR12062494 | Pre-XDR-TB | lineage4.4.2 | None | ERR10762402 | MDR-TB | lineage4.2.1 | None | SRR9971273 | MDR-TB | lineage4.3.3 | None | ERR4423533 | MDR-TB | lineage3.1.1 | None | ERR13290281 | MDR-TB | lineage2.2.1 | None | ERR6865927 | MDR-TB | lineage4.3.3 | None | ERR4423768 | MDR-TB | lineage3.1.1 | None | ERR4423762 | MDR-TB | lineage3.1.1 | None | ERR6358960 | MDR-TB | lineage4.6.1.2 | None | SRR5535909 | MDR-TB | lineage3.1.1 | None | SRR29094004 | MDR-TB | lineage3 | None | SRR5535912 | MDR-TB | lineage3.1.1 | None | ERR5866556 | MDR-TB | lineage2.2.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | ERR13285015 | MDR-TB | lineage2.2.1 | None | ERR4423684 | MDR-TB | lineage3.1.1 | None | SRR1167075 | MDR-TB | lineage3.1.1 | None | SRR29289303 | XDR-TB | lineage3 | None | SRR29289401 | XDR-TB | lineage3 | None | SRR6824357 | Pre-XDR-TB | lineage4.4.2 | None | ERR10680071 | MDR-TB | lineage4.4.1.1 | None | ERR13290624 | MDR-TB | lineage3.1.1 | None | ERR3335759 | MDR-TB | lineage3 | pk | ERR4798456 | MDR-TB | lineage3 | in | ERR4799919 | Pre-XDR-TB | lineage3.1;lineage4.2.2 | in | ERR7737907 | MDR-TB | lineage2.1 | None | ERR4798411 | MDR-TB | lineage4.2.2.2 | in | ERR4799716 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR4423767 | MDR-TB | lineage3.1.1 | None | ERR13284443 | MDR-TB | lineage4.2.1.1 | None | ERR6879051 | MDR-TB | lineage4.3.3 | None | SAMN02414851 | MDR-TB | lineage2.2.1 | se | ERR4553415 | MDR-TB | lineage4 | None | ERR4423657 | MDR-TB | lineage3.1.1 | None | ERR3287434 | MDR-TB | lineage4.3.3 | pe | ERR3287507 | RR-TB | lineage2.2.1.1 | pe | ERR5917752 | MDR-TB | lineage4.2.1.1 | by | SRR10040440 | MDR-TB | lineage4.4.2 | None | SRR1165535 | MDR-TB | lineage2.2.1 | None | ERR7911327 | MDR-TB | lineage2.1 | vn | ERR751557 | MDR-TB | lineage4.3.3 | pe | ERR751589 | MDR-TB | lineage4.3.3 | pe | SRR5535918 | MDR-TB | lineage3.1.1 | None | SRR12416834 | MDR-TB | lineage2.2.2 | None | ERR2516237 | MDR-TB | lineage4.6.1.2 | be | ERR2516280 | MDR-TB | lineage1.1.3.2 | be | ERR2516302 | MDR-TB | lineage4.3.2 | be | ERR2515396 | RR-TB | lineage2.2.1 | za | ERR6865709 | MDR-TB | lineage4.3.3 | None | SRR5535931 | MDR-TB | lineage3.1.1 | None | ERR4423663 | MDR-TB | lineage3.1.1 | None | ERR1034805 | MDR-TB | lineage4.1.2.1;lineage4.3.3 | pe | SRR12062492 | Pre-XDR-TB | lineage4.4.2 | None | ERR13291125 | Pre-XDR-TB | lineage4.5 | None | SRR21277275 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316341 | MDR-TB | lineage4.5 | None | ERR4423654 | Other | lineage3.1.1 | None | ERR4423698 | RR-TB | lineage3.1.1 | None | ERR4423761 | MDR-TB | lineage3.1.1 | None | SRR23340068 | MDR-TB | lineage4.2.1.1 | None | ERR6358780 | MDR-TB | lineage4.6.1.2 | None | ERR6362658 | MDR-TB | lineage2.2.1 | None | SRR12882484 | MDR-TB | lineage3.1.1 | None | ERR1034803 | MDR-TB | lineage4.3.3 | pe | ERR9806909 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827333 | MDR-TB | lineage3 | None | ERR6865539 | MDR-TB | lineage4.3.3 | None | ERR4423702 | MDR-TB | lineage3.1.1 | None | SRR10869205 | Pre-XDR-TB | lineage2.2.1 | None | ERR4423673 | MDR-TB | lineage3.1.1 | None | SRR1165563 | MDR-TB | lineage2.2.1 | None | ERR4423700 | MDR-TB | lineage3.1.1 | None |
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