TB-Profiler
Home
Upload
SRA data
Rv0676c
- c.393_394dupGG
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
12 MDR-TB
7 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage2.2.2
12
lineage2.2.1
2
lineage4.3.3
2
lineage3.1.1;lineage4.3.3
2
lineage4.1.1.3
1
lineage3.1.1
1
Showing 1 to 6 of 6 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
20
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
SRR1165210
MDR-TB
lineage2.2.2
None
SRR1165215
MDR-TB
lineage2.2.2
None
SRR1165222
MDR-TB
lineage2.2.2
None
SRR1165228
Pre-XDR-TB
lineage2.2.2
None
SRR1165240
Pre-XDR-TB
lineage2.2.2
None
SRR1165245
Pre-XDR-TB
lineage2.2.2
None
SRR1165264
MDR-TB
lineage2.2.1
None
SRR1165270
MDR-TB
lineage3.1.1
None
SRR1165302
MDR-TB
lineage2.2.2
None
SRR1165315
XDR-TB
lineage3.1.1;lineage4.3.3
None
Showing 1 to 10 of 20 entries
Previous
1
2
Next