lineage | Count |
---|---|
La1.8.1 | 6 |
lineage2.2.1.2 | 1 |
lineage2.2.1 | 2 |
La1.7.1 | 4 |
lineage4.8.2 | 2 |
lineage3.1.1 | 3 |
lineage4.6.1.1 | 2 |
lineage3 | 12 |
lineage4.6.1 | 2 |
lineage5.1.4 | 1 |
lineage4.3.4.2.1 | 3 |
lineage4.1.2 | 1 |
lineage1.1.3.2 | 2 |
lineage4.3.2.1;lineage3.1.1 | 1 |
lineage4.9.1 | 1 |
lineage4.3.4.1 | 1 |
lineage1.1.3 | 1 |
lineage4.1.1.3 | 1 |
lineage4.3.3 | 1 |
lineage4.3.1.1 | 1 |
lineage4.1.2.1 | 2 |
lineage4.9 | 7 |
lineage4.2.2;lineage4.1.2;lineage2.2.2;lineage1.2.1.2.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.3.4.1;lineage1.1.2 | 1 |
lineage4.2.2.2 | 1 |
lineage3.1.2 | 3 |
lineage1.2.2.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.8 | 3 |
lineage4.1.1 | 2 |
lineage1.1.2 | 1 |
lineage4.1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 73 |
ID | Drug resistance | Lineage | Country iso2 | SRR1791865 | Other | La1.8.1 | None | SRR125289 | Sensitive | lineage2.2.1.2 | None | SRR125299 | Sensitive | lineage2.2.1 | None | SRR1792252 | Other | La1.8.1 | None | SRR1792176 | Other | La1.8.1 | None | SRR1792486 | Other | La1.7.1 | None | SRR1792499 | Other | La1.7.1 | None | SRR1792495 | Other | La1.7.1 | None | SRR18213841 | Sensitive | lineage4.8.2 | None | SRR18213753 | Sensitive | lineage3.1.1 | None | ERR1199041 | Sensitive | lineage4.6.1.1 | None | SRR18213914 | Sensitive | lineage4.8.2 | None | SRR2467265 | Sensitive | lineage3 | None | SRR4019487 | Other | La1.8.1 | None | ERR1199053 | Sensitive | lineage4.6.1.1 | None | ERR1199059 | Sensitive | lineage4.6.1 | None | ERR1199039 | Sensitive | lineage4.6.1 | None | ERR234179 | Sensitive | lineage3 | None | ERR234178 | Sensitive | lineage3 | None | SRR4019491 | Other | La1.7.1 | None | ERR234127 | Sensitive | lineage2.2.1 | None | ERR234145 | Sensitive | lineage5.1.4 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR245740 | Sensitive | lineage4.1.2 | None | ERR245820 | Sensitive | lineage1.1.3.2 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR245817 | Sensitive | lineage1.1.3.2 | None | ERR245819 | Other | lineage3.1.1 | None | ERR245809 | Sensitive | lineage4.3.4.1 | None | ERR245825 | Sensitive | lineage1.1.3 | None | ERR245823 | Sensitive | lineage4.1.1.3 | None | SRR857286 | MDR-TB | lineage4.3.3 | None | ERR266583 | Sensitive | lineage4.3.1.1 | None | ERR233352 | Sensitive | lineage4.1.2.1 | None | SRR314729 | Sensitive | lineage4.9 | None | ERR036207 | Other | lineage4.9 | None | ERR025437 | HR-TB | lineage4.2.2;lineage4.1.2;lineage2.2.2;lineage1.2.1.2.1 | None | ERR036198 | Other | lineage4.3.4.2 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR036237 | Sensitive | lineage4.3.4.2.1 | None | ERR046750 | Other | La1.8.1 | None | ERR038267 | Sensitive | lineage4.2.2.2 | None | ERR040092 | Sensitive | lineage3.1.1 | None | ERR046812 | Sensitive | lineage3 | None | ERR046802 | Sensitive | lineage3.1.2 | None | ERR046774 | Other | La1.8.1 | None | ERR046804 | Sensitive | lineage3 | None | ERR046807 | Sensitive | lineage3 | None | ERR046809 | Sensitive | lineage3 | None | ERR046805 | Sensitive | lineage3 | None | ERR046828 | Sensitive | lineage3 | None | ERR046813 | Sensitive | lineage3 | None | ERR046815 | Sensitive | lineage3.1.2 | None | ERR046886 | Sensitive | lineage1.2.2.1 | None | ERR046830 | Sensitive | lineage3.1.2 | None | ERR046817 | Sensitive | lineage4.9 | None | ERR046835 | Sensitive | lineage4.4.1.1 | None | ERR046899 | Sensitive | lineage4.8 | None | ERR046944 | Pre-XDR-TB | lineage4.8 | None | ERR046931 | Sensitive | lineage4.1.1 | None | ERR046909 | Sensitive | lineage4.9 | None | ERR046955 | Sensitive | lineage4.1.2.1 | None | ERR046956 | Sensitive | lineage4.9 | None | ERR046978 | Sensitive | lineage1.1.2 | None | ERR046976 | Sensitive | lineage4.1.1 | None | ERR046979 | Sensitive | lineage3 | None | ERR046977 | MDR-TB | lineage4.8 | None | ERR046985 | MDR-TB | lineage4.1.1.3.1 | None | SRR034934 | Sensitive | lineage4.9 | None | ERR046987 | Sensitive | lineage3 | None | SRR034936 | Sensitive | lineage4.9 | None |
---|